PDB Chemical Component TCK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TCK

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
S O1S 1.547 1.421
S C1 1.857 1.762
O2S S 1.508 1.421
C1 C2 1.424 1.382
C1 C6 1.395 1.382
C2 C3 1.425 1.382
C2 H2 1.080 1.080
C3 C4 1.380 1.382
C3 H3 1.080 1.080
C4 C5 1.379 1.383
C4 C7 1.647 1.508
C5 C6 1.398 1.382
C5 H5 1.080 1.081
C6 H6 1.080 1.080
C7 H1 1.100 1.090
C7 H2A 1.100 1.090
C7 H3A 1.100 1.090
N CA 1.450 1.465
N H 1.000 0.970
N S 1.376 1.656
CA C 1.514 1.507
CA CB 1.500 1.530
CA HA 1.100 1.089
C O 1.128 1.207
C CM 1.491 1.507
CB CG 1.675 1.530
CB HB2 1.100 1.091
CB HB3 1.100 1.090
CG CD 1.369 1.530
CG HG2 1.100 1.090
CG HG3 1.100 1.090
CD CE 1.620 1.530
CD HD2 1.100 1.090
CD HD3 1.100 1.090
CE NZ 1.282 1.470
CE HE2 1.100 1.090
CE HE3 1.100 1.090
NZ HZ1 1.000 1.008
NZ HZ2 1.000 1.009
CM HM1 1.100 1.089
CM HM2 1.100 1.090
CM CL1 1.770 1.804

Bond Angles for TCK

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1S S C1 108.3 106.4
O2S S C1 105.1 106.4
S C1 C2 117.1 120.0
S C1 C6 119.8 120.0
C2 C1 C6 122.8 120.0
C1 C2 C3 116.6 120.0
C1 C2 H2 121.7 120.0
C1 C6 C5 118.3 120.0
C1 C6 H6 120.9 120.1
C3 C2 H2 121.7 120.0
C2 C3 C4 119.2 120.0
C2 C3 H3 120.4 120.0
C4 C3 H3 120.4 120.0
C3 C4 C5 123.2 120.0
C3 C4 C7 118.1 120.0
C5 C4 C7 118.3 120.0
C4 C5 C6 119.3 120.0
C4 C5 H5 120.3 120.0
C4 C7 H1 109.5 109.4
C4 C7 H2A 109.5 109.5
C4 C7 H3A 109.5 109.4
C6 C5 H5 120.4 120.1
C5 C6 H6 120.9 119.9
H1 C7 H2A 109.5 109.5
H1 C7 H3A 109.5 109.5
H2A C7 H3A 109.5 109.6
CA N H 105.0 120.0
N CA C 114.5 109.5
N CA CB 102.6 109.5
N CA HA 115.2 109.5
C CA CB 119.7 109.4
C CA HA 95.9 109.5
CA C O 128.3 120.0
CA C CM 110.3 120.0
CB CA HA 109.4 109.4
CA CB CG 114.8 109.5
CA CB HB2 107.8 109.5
CA CB HB3 107.7 109.5
O C CM 121.3 120.0
C CM HM1 109.5 109.5
C CM HM2 109.5 109.5
C CM CL1 109.4 109.5
CG CB HB2 107.7 109.4
CG CB HB3 107.8 109.5
CB CG CD 104.0 109.4
CB CG HG2 111.4 109.5
CB CG HG3 111.4 109.5
HB2 CB HB3 111.1 109.5
CD CG HG2 111.4 109.5
CD CG HG3 111.4 109.5
CG CD CE 104.6 109.4
CG CD HD2 111.1 109.5
CG CD HD3 111.1 109.5
HG2 CG HG3 107.5 109.5
CE CD HD2 111.1 109.4
CE CD HD3 111.1 109.5
CD CE NZ 106.6 109.5
CD CE HE2 110.4 109.5
CD CE HE3 110.4 109.5
HD2 CD HD3 107.8 109.5
NZ CE HE2 110.5 109.4
NZ CE HE3 110.5 109.4
CE NZ HZ1 109.5 111.0
CE NZ HZ2 109.5 111.0
HE2 CE HE3 108.5 109.5
HZ1 NZ HZ2 109.4 111.0
HM1 CM HM2 109.5 109.5
CL1 CM HM1 109.5 109.4
CL1 CM HM2 109.5 109.5

Torsion Angles for TCK

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2S S O1S C1 116.0 237.0
O1S S C1 C2 166.8 203.5
O1S S C1 C6 353.7 23.2
C2 C1 S C6 173.1 180.3
S C1 C2 C3 181.1 180.0
S C1 C2 H2 1.1 359.9
S C1 C6 C5 180.9 179.8
S C1 C6 H6 0.9 0.0
O1S S O2S C1 242.0 123.0
O2S S C1 C2 45.7 336.5
O2S S C1 C6 232.6 156.2
S C1 C2 C6 187.1 179.7
C2 C1 C6 C5 8.2 359.5
C2 C1 C6 H6 188.2 179.7
C3 C2 C1 H2 180.0 180.1
C1 C2 C3 C4 4.0 359.9
C1 C2 C3 H3 184.0 180.0
S C1 C6 C2 172.7 180.3
C6 C1 C2 C3 354.0 0.3
C6 C1 C2 H2 173.9 180.2
C4 C5 C6 C1 351.8 0.4
C1 C6 C5 H5 171.8 180.3
C5 C6 C1 H6 180.0 179.8
C3 C2 C1 C6 354.0 0.3
C1 C2 C3 H2 180.0 179.9
C4 C3 C2 H3 180.0 180.0
C2 C3 C4 C5 355.3 360.0
C2 C3 C4 C7 182.1 180.0
H2 C2 C1 C6 173.9 180.2
C1 C2 H2 C3 180.0 180.1
H2 C2 C3 C4 184.0 180.1
H2 C2 C3 H3 4.0 0.1
C4 C3 C2 H2 184.0 180.1
C2 C3 C4 H3 180.0 180.0
C5 C4 C3 C7 173.3 180.0
C3 C4 C5 C6 6.8 359.9
C3 C4 C5 H5 186.8 179.9
C3 C4 C7 H1 86.8 90.0
C3 C4 C7 H2A 206.8 210.0
C3 C4 C7 H3A 326.8 330.0
H3 C3 C2 H2 4.0 0.1
C2 C3 H3 C4 180.0 180.0
H3 C3 C4 C5 175.4 179.9
H3 C3 C4 C7 2.1 359.9
C1 C6 C5 C4 351.8 0.4
C5 C4 C3 H3 175.4 179.9
C3 C4 C5 C7 186.7 180.0
C5 C4 C7 H1 273.2 270.0
C5 C4 C7 H2A 33.2 30.0
C5 C4 C7 H3A 153.2 150.0
C6 C5 C4 H5 180.0 179.9
C4 C5 C6 H6 171.8 180.2
C7 C4 C3 H3 2.1 359.9
C3 C4 C7 C5 173.6 180.0
C7 C4 C5 C6 180.1 179.9
C7 C4 C5 H5 0.0 359.9
H1 C7 C4 H2A 240.0 240.0
H1 C7 C4 H3A 120.0 119.9
H2A C7 C4 H3A 240.0 239.9
C1 C6 C5 H6 180.0 180.2
C6 C5 C4 C7 180.1 179.9
C4 C5 C6 H5 180.0 180.1
H5 C5 C4 C7 0.0 359.9
C4 C5 H5 C6 180.0 179.9
H5 C5 C6 H6 351.8 0.1
C1 C6 H6 C5 180.0 179.8
H6 C6 C5 H5 351.8 0.1
C4 C7 H1 H2A 120.0 120.0
C4 C7 H1 H3A 240.0 240.1
H2A C7 H1 H3A 120.0 120.1
C4 C7 H2A H1 240.0 240.0
C4 C7 H2A H3A 120.0 120.0
H1 C7 H2A H3A 240.0 240.0
C4 C7 H3A H1 120.0 119.9
C4 C7 H3A H2A 240.0 240.0
H1 C7 H3A H2A 120.0 120.0
C CA N CB 131.3 120.0
C CA N HA 250.1 239.9
N CA C O 288.8 345.1
N CA C CM 104.7 165.0
CB CA N HA 118.8 120.0
N CA CB CG 199.5 295.0
N CA CB HB2 319.5 54.9
N CA CB HB3 79.5 174.9
H N CA C 71.0 85.0
H N CA CB 299.6 325.0
H N CA HA 180.9 205.0
C CA N H 71.0 85.0
N CA C CB 237.5 240.0
N CA C HA 121.2 120.1
CB CA C HA 243.6 240.1
C CA CB CG 71.4 175.0
C CA CB HB2 191.3 295.0
C CA CB HB3 311.3 55.0
O C CA CM 184.1 180.1
CA C CM HM1 172.3 300.0
CA C CM HM2 292.3 60.1
CA C CM CL1 52.3 180.1
CB CA N H 299.6 325.0
N CA CB C 128.1 120.0
N CA CB HA 237.2 239.9
C CA CB HA 109.1 119.9
CB CA C O 51.2 105.1
CB CA C CM 227.1 285.0
CG CB CA HB2 240.0 240.0
CG CB CA HB3 120.0 120.0
CA CB CG CD 167.5 180.0
CA CB CG HG2 287.6 299.9
CA CB CG HG3 47.5 60.0
HB2 CB CA HB3 240.0 240.0
HA CA N H 180.9 205.0
N CA HA C 239.3 239.9
N CA HA CB 114.9 120.0
C CA HA CB 235.6 240.1
HA CA C O 167.6 225.0
HA CA C CM 343.5 44.9
HA CA CB CG 322.3 55.1
HA CA CB HB2 82.2 175.0
HA CA CB HB3 202.2 295.0
O C CA CB 51.2 105.1
O C CA HA 167.6 225.0
CA C O CM 175.5 179.9
O C CM HM1 348.5 119.9
O C CM HM2 108.5 240.0
O C CM CL1 228.5 360.0
CM C CA CB 227.1 285.0
CM C CA HA 343.5 44.9
CA C CM O 183.8 180.1
HM1 CM C HM2 240.0 239.9
CL1 CM C HM1 240.0 240.0
CL1 CM C HM2 120.0 120.0
CG CB CA HA 322.3 55.1
CA CB CG HB2 120.0 120.0
CA CB CG HB3 240.0 239.9
HB2 CB CG HB3 120.0 120.0
CD CG CB HG2 240.0 240.0
CD CG CB HG3 120.0 120.0
CB CG CD CE 182.3 180.0
CB CG CD HD2 302.3 300.0
CB CG CD HD3 62.3 60.0
HG2 CG CB HG3 240.0 240.0
HB2 CB CA HA 82.2 175.0
CA CB HB2 CG 235.7 240.0
CA CB HB2 HB3 117.8 120.0
CG CB HB2 HB3 242.2 240.0
HB2 CB CG CD 47.5 60.0
HB2 CB CG HG2 167.6 180.0
HB2 CB CG HG3 287.5 300.0
HB3 CB CA HA 202.2 295.0
CA CB HB3 CG 124.4 120.0
CA CB HB3 HB2 242.2 240.0
CG CB HB3 HB2 117.8 120.0
HB3 CB CG CD 287.5 300.0
HB3 CB CG HG2 47.6 60.0
HB3 CB CG HG3 167.5 180.0
CD CG CB HB2 47.5 60.0
CD CG CB HB3 287.5 300.0
CB CG CD HG2 120.0 120.0
CB CG CD HG3 240.0 240.0
HG2 CG CD HG3 120.0 120.0
CE CD CG HD2 240.0 240.0
CE CD CG HD3 120.0 120.0
CG CD CE NZ 164.5 180.0
CG CD CE HE2 284.6 300.0
CG CD CE HE3 44.5 60.1
HD2 CD CG HD3 240.0 240.0
HG2 CG CB HB2 167.6 180.0
HG2 CG CB HB3 47.6 60.0
CB CG HG2 CD 244.5 240.0
CB CG HG2 HG3 122.2 120.0
CD CG HG2 HG3 237.8 240.0
HG2 CG CD CE 62.3 60.0
HG2 CG CD HD2 182.3 180.0
HG2 CG CD HD3 302.3 300.0
HG3 CG CB HB2 287.5 300.0
HG3 CG CB HB3 167.5 180.0
CB CG HG3 CD 115.5 120.0
CB CG HG3 HG2 237.8 240.0
CD CG HG3 HG2 122.2 120.0
HG3 CG CD CE 302.3 300.0
HG3 CG CD HD2 62.4 60.0
HG3 CG CD HD3 182.4 180.0
CE CD CG HG2 62.3 60.0
CE CD CG HG3 302.3 300.0
CG CD CE HD2 120.0 120.0
CG CD CE HD3 240.0 240.0
HD2 CD CE HD3 120.0 120.0
NZ CE CD HE2 240.0 240.0
NZ CE CD HE3 120.0 120.0
CD CE NZ HZ1 180.0 180.0
CD CE NZ HZ2 300.0 304.0
HE2 CE CD HE3 240.0 239.9
HD2 CD CG HG2 182.3 180.0
HD2 CD CG HG3 62.4 60.0
CG CD HD2 CE 243.9 240.0
CG CD HD2 HD3 122.0 120.0
CE CD HD2 HD3 238.1 240.0
HD2 CD CE NZ 44.5 60.0
HD2 CD CE HE2 164.6 180.0
HD2 CD CE HE3 284.5 300.0
HD3 CD CG HG2 302.3 300.0
HD3 CD CG HG3 182.4 180.0
CG CD HD3 CE 116.1 120.0
CG CD HD3 HD2 238.0 239.9
CE CD HD3 HD2 122.0 120.0
HD3 CD CE NZ 284.5 300.0
HD3 CD CE HE2 44.6 60.0
HD3 CD CE HE3 164.5 180.0
NZ CE CD HD2 44.5 60.0
NZ CE CD HD3 284.5 300.0
CD CE NZ HE2 120.0 120.0
CD CE NZ HE3 240.0 240.0
HE2 CE NZ HE3 120.0 120.0
HZ1 NZ CE HZ2 240.0 236.0
HE2 CE CD HD2 164.6 180.0
HE2 CE CD HD3 44.6 60.0
CD CE HE2 NZ 242.3 240.0
CD CE HE2 HE3 121.1 120.1
NZ CE HE2 HE3 238.8 240.1
HE2 CE NZ HZ1 60.0 60.0
HE2 CE NZ HZ2 180.0 184.0
HE3 CE CD HD2 284.5 300.0
HE3 CE CD HD3 164.5 180.0
CD CE HE3 NZ 117.6 120.0
CD CE HE3 HE2 238.9 239.9
NZ CE HE3 HE2 121.2 119.9
HE3 CE NZ HZ1 300.0 300.1
HE3 CE NZ HZ2 60.0 64.0
HZ1 NZ CE HE2 60.0 60.0
HZ1 NZ CE HE3 300.0 300.1
CE NZ HZ1 HZ2 120.0 123.9
HZ2 NZ CE HE2 180.0 184.0
HZ2 NZ CE HE3 60.0 64.0
CE NZ HZ2 HZ1 240.0 236.0
C CM HM1 HM2 120.0 120.0
C CM HM1 CL1 240.1 240.0
CL1 CM HM1 HM2 240.0 240.0
C CM HM2 HM1 240.0 239.9
C CM HM2 CL1 120.0 120.0
CL1 CM HM2 HM1 120.0 120.0
C CM CL1 HM1 120.0 120.0
C CM CL1 HM2 240.0 240.0
HM1 CM CL1 HM2 120.0 120.0