PDB Chemical Component TC1

Ideal Model

Chemical Description

Name 3-(5-PHOSPHO-2-DEOXY-BETA-D-RIBOFURANOSYL)-2-OXO-1,3-DIAZA-PHENOTHIAZINE
Formula C15 H16 N3 O7 P S
Formal charge 0
Molecular weight 413.342 g/mol
Component type DNA LINKING
Nonstandard Parent Id DC

Chemical features

Atom count 43
Chiral atom count 3
Chiral atoms C4' C3' C1'
Observed leaving atoms OP3 HO3'
Bond count 46
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) 3-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-3H-pyrimido[5,4-b][1,4]benzothiazin-2(10H)-one
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-3-hydroxy-5-(2-oxo-10H-pyrimido[5,4-b][1,4]benzothiazin-3-yl)oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1C[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=C3Sc4ccccc4NC3=NC2=O
SMILES (CACTVS) O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)N2C=C3Sc4ccccc4NC3=NC2=O
Stereo SMILES (OpenEye) c1ccc2c(c1)NC3=NC(=O)N(C=C3S2)[C@H]4C[C@@H]([C@H](O4)COP(=O)(O)O)O
InChI descriptor InChI=1S/C15H16N3O7PS/c19-9-5-13(25-10(9)7-24-26(21,22)23)18-6-12-14(17-15(18)20)16-8-3-1-2-4-11(8)27-12/h1-4,6,9-10,13,19H,5,7H2,(H,16,17,20)(H2,21,22,23)/t9-,10+,13+/m0/s1
InChIKey descriptor JXJOUUOATWCAOY-OPQQBVKSSA-N

Status Information

Last modified 2011-06-04
Created 2004-07-18
Release status REL
Model PDB code 1TUQ
Processing site RCSB