PDB Chemical Component TB1

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TB1

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C2	C5	1.387	1.394
C2	C1	1.390	1.390
C2	H2	1.080	1.087
C5	C8	1.378	1.395
C5	H5	1.080	1.087
C8	C6	1.393	1.395
C8	H8	1.080	1.087
C6	C3	1.377	1.395
C6	H6	1.080	1.086
C3	C1	1.393	1.390
C3	H3	1.080	1.087
C1	C4	1.412	1.501
C4	O2	1.466	1.421
C4	H41	1.099	1.096
C4	H42	1.100	1.095
O2	C11	1.461	1.422
C11	C9	1.523	1.515
C11	C7	1.531	1.533
C11	H11	1.100	1.098
C9	O1	1.259	1.223
C9	O5	1.261	1.357
O5	HO5	0.950	0.981
C7	N	1.472	1.467
C7	C10	1.553	1.523
C7	H7	1.100	1.096
C10	O4	1.251	1.224
C10	O3	1.251	1.358
O3	HO3	0.950	0.981
N	HN1	1.000	0.994
N	HN2	1.000	0.995

Bond Angles for TB1

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C5	C2	C1	121.6	119.7
C5	C2	H2	119.2	119.5
C2	C5	C8	118.5	120.0
C2	C5	H5	120.7	120.0
C1	C2	H2	119.2	120.8
C2	C1	C3	119.1	120.6
C2	C1	C4	119.4	119.7
C8	C5	H5	120.8	120.0
C5	C8	C6	120.6	120.0
C5	C8	H8	119.7	120.0
C6	C8	H8	119.7	120.0
C8	C6	C3	120.5	120.0
C8	C6	H6	119.7	120.0
C3	C6	H6	119.8	120.1
C6	C3	C1	119.6	119.7
C6	C3	H3	120.2	119.4
C1	C3	H3	120.2	120.9
C3	C1	C4	121.5	119.6
C1	C4	O2	121.8	109.0
C1	C4	H41	105.5	110.9
C1	C4	H42	102.7	110.8
O2	C4	H41	105.6	109.0
O2	C4	H42	102.6	109.2
C4	O2	C11	105.9	111.5
H41	C4	H42	119.8	107.9
O2	C11	C9	113.0	108.4
O2	C11	C7	115.7	110.2
O2	C11	H11	102.9	107.4
C9	C11	C7	111.6	112.6
C9	C11	H11	107.9	107.4
C11	C9	O1	118.7	125.4
C11	C9	O5	114.9	110.9
C7	C11	H11	104.6	110.7
C11	C7	N	108.3	109.5
C11	C7	C10	108.9	112.3
C11	C7	H7	111.3	111.4
O5	C9	O1	126.4	123.6
C9	O5	HO5	109.5	111.9
C10	C7	N	111.4	107.5
N	C7	H7	108.8	106.9
C7	N	HN1	109.5	117.8
C7	N	HN2	109.5	117.7
C10	C7	H7	108.2	108.9
C7	C10	O4	117.5	125.3
C7	C10	O3	117.7	112.1
O4	C10	O3	124.8	122.6
C10	O3	HO3	109.5	115.4
HN1	N	HN2	109.5	123.1

Torsion Angles for TB1

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C1	C2	C5	H2	180.0	180.1
C5	C2	C1	C3	0.9	359.9
C5	C2	C1	C4	180.0	180.0
C8	C5	C2	H5	180.0	180.1
C2	C5	C8	C6	359.5	359.9
C2	C5	C8	H8	179.5	180.0
C5	C2	C1	H2	180.0	179.9
C1	C2	C5	C8	360.0	0.1
C1	C2	C5	H5	180.0	180.0
C6	C3	C1	C2	358.6	0.0
C2	C1	C3	H3	178.6	180.0
C3	C1	C2	C4	180.9	180.0
C2	C1	C4	O2	117.2	270.0
C2	C1	C4	H41	357.2	30.1
C2	C1	C4	H42	231.0	149.9
C5	C2	H2	C1	180.0	180.1
H2	C2	C5	C8	180.0	180.0
H2	C2	C5	H5	360.0	359.9
H2	C2	C1	C3	181.0	180.0
H2	C2	C1	C4	0.0	0.1
C8	C5	C2	C1	360.0	0.1
C8	C5	C2	H2	180.0	180.0
C2	C5	C8	H5	180.0	179.9
C6	C8	C5	H8	180.0	179.9
C5	C8	C6	C3	360.0	0.1
C5	C8	C6	H6	180.0	180.0
H5	C5	C2	C1	180.0	180.0
H5	C5	C2	H2	360.0	359.9
C2	C5	H5	C8	180.0	180.1
H5	C5	C8	C6	179.6	180.0
H5	C5	C8	H8	359.6	0.1
C6	C8	C5	H5	179.6	180.0
C5	C8	C6	H8	180.0	180.1
C3	C6	C8	H6	180.0	180.0
C8	C6	C3	C1	1.0	360.0
C8	C6	C3	H3	180.9	180.0
H8	C8	C5	H5	359.6	0.1
C5	C8	H8	C6	180.0	179.9
H8	C8	C6	C3	180.0	180.0
H8	C8	C6	H6	360.0	359.9
C2	C1	C3	C6	358.6	0.0
C3	C6	C8	H8	180.0	180.0
C8	C6	C3	H6	180.0	180.0
C1	C3	C6	H3	180.0	180.0
C6	C3	C1	C4	179.5	180.0
H6	C6	C8	H8	360.0	359.9
C8	C6	H6	C3	180.0	180.0
H6	C6	C3	C1	181.0	180.0
H6	C6	C3	H3	0.9	0.0
C3	C1	C2	H2	181.0	180.0
C2	C1	C3	C4	179.1	180.0
C1	C3	C6	H6	181.0	180.0
C6	C3	C1	H3	180.0	180.0
C3	C1	C4	O2	296.2	90.0
C3	C1	C4	H41	176.2	210.1
C3	C1	C4	H42	50.0	329.9
H3	C3	C6	H6	0.9	0.0
C6	C3	H3	C1	180.0	180.0
H3	C3	C1	C4	359.5	360.0
C4	C1	C2	H2	0.0	0.1
C2	C1	C4	C3	180.9	180.0
C4	C1	C3	H3	359.5	360.0
O2	C4	C1	H41	120.0	239.9
O2	C4	C1	H42	246.2	120.1
C1	C4	O2	C11	34.0	180.0
H41	C4	C1	H42	126.2	240.2
C1	C4	O2	H41	240.0	121.2
C1	C4	O2	H42	113.8	238.9
H41	C4	O2	H42	233.8	117.6
C4	O2	C11	C9	236.2	300.0
C4	O2	C11	C7	105.7	176.4
C4	O2	C11	H11	352.3	55.7
C1	C4	H41	O2	130.2	239.9
C1	C4	H41	H42	245.1	121.5
O2	C4	H41	H42	114.9	241.6
H41	C4	O2	C11	154.0	58.7
C1	C4	H42	O2	232.8	120.1
C1	C4	H42	H41	116.4	238.4
O2	C4	H42	H41	243.6	118.4
H42	C4	O2	C11	280.2	301.1
C11	O2	C4	H41	154.0	58.7
C11	O2	C4	H42	280.2	301.1
C9	C11	O2	C7	130.5	123.6
C9	C11	O2	H11	243.9	244.3
O2	C11	C9	O1	289.1	325.8
O2	C11	C9	O5	109.6	147.2
C7	C11	O2	H11	113.5	120.7
O2	C11	C7	N	357.9	60.6
O2	C11	C7	C10	236.6	301.3
O2	C11	C7	H7	117.4	178.7
O2	C11	C9	C7	227.5	237.9
O2	C11	C9	H11	113.1	115.8
C7	C11	C9	H11	245.6	237.9
C9	C11	C7	N	226.8	299.5
C9	C11	C7	C10	105.4	180.1
C9	C11	C7	H7	346.3	57.6
O5	C9	C11	O1	180.4	181.3
C11	C9	O5	HO5	179.5	178.6
O2	C11	C7	C9	131.1	121.1
O2	C11	C7	H11	247.5	241.3
C9	C11	C7	H11	116.4	120.2
C7	C11	C9	O1	61.6	88.0
C7	C11	C9	O5	242.1	269.3
C10	C7	C11	N	238.7	240.6
N	C7	C11	H7	240.5	241.9
C11	C7	N	HN1	35.7	78.5
C11	C7	N	HN2	155.7	271.9
C10	C7	C11	H7	119.2	122.6
C11	C7	C10	O4	275.6	116.0
C11	C7	C10	O3	94.5	296.9
O2	C11	H11	C9	240.3	243.6
O2	C11	H11	C7	121.3	120.3
C9	C11	H11	C7	241.0	236.8
H11	C11	C9	O1	176.1	210.1
H11	C11	C9	O5	356.5	31.4
H11	C11	C7	N	110.4	179.3
H11	C11	C7	C10	349.0	60.0
H11	C11	C7	H7	229.9	297.4
O1	C9	C11	C7	61.6	88.0
O1	C9	C11	H11	176.1	210.1
C11	C9	O1	O5	180.5	181.5
O1	C9	O5	HO5	0.0	359.9
O5	C9	C11	C7	242.1	269.3
O5	C9	C11	H11	356.5	31.4
C11	C9	O5	O1	179.5	178.7
HO5	O5	C9	O1	0.0	359.9
N	C7	C11	H11	110.4	179.3
C11	C7	N	C10	240.2	237.7
C11	C7	N	H7	121.1	120.9
C10	C7	N	H7	240.8	243.2
N	C7	C10	O4	156.2	355.5
N	C7	C10	O3	335.1	176.3
HN1	N	C7	HN2	240.0	166.6
C10	C7	C11	H11	349.0	60.0
C11	C7	C10	N	119.4	120.5
C11	C7	C10	H7	238.9	236.0
N	C7	C10	H7	119.5	115.5
C10	C7	N	HN1	155.5	200.8
C10	C7	N	HN2	275.5	34.2
O4	C10	C7	O3	181.1	179.2
C7	C10	O3	HO3	181.1	179.3
H7	C7	C11	H11	229.9	297.4
C11	C7	H7	N	240.8	240.4
C11	C7	H7	C10	119.6	124.5
C10	C7	H7	N	121.2	115.9
H7	C7	N	HN1	274.6	317.6
H7	C7	N	HN2	34.7	151.0
H7	C7	C10	O4	36.6	240.0
H7	C7	C10	O3	215.6	60.8
O4	C10	C7	N	156.2	355.5
O4	C10	C7	H7	36.6	240.0
C7	C10	O4	O3	178.8	180.9
O4	C10	O3	HO3	360.0	0.0
O3	C10	C7	N	335.1	176.3
O3	C10	C7	H7	215.6	60.8
C7	C10	O3	O4	181.2	179.2
HN1	N	C7	H7	274.6	317.6
C7	N	HN1	HN2	120.0	194.2
HN2	N	C7	H7	34.7	151.0
C7	N	HN2	HN1	240.0	165.8