PDB Chemical Component TA3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for TA3

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
OP3 P 1.612  
P OP2 1.480  
P O5' 1.608  
P OP1 1.481  
OP1 HO1P 0.950  
OP2 HO2P 0.950  
O5' C5' 1.448  
C5' C4' 1.545  
C5' H5' 1.100  
C5' H5'' 1.100  
C4' O4' 1.453  
C4' C3' 1.508  
C4' H4' 1.100  
O4' C1' 1.426  
C3' C2' 1.497  
C3' O3' 1.441  
C3' H3' 1.100  
O3' HO3' 0.950  
C2' C1' 1.521  
C2' H2' 1.100  
C2' H2'' 1.100  
C1' N1 1.505  
C1' H1' 1.100  
N1 C2 1.417  
N1 C6 1.529  
C2 O2 1.237  
C2 N3 1.496  
N3 C4 1.498  
N3 C6 1.558  
C4 C5 1.372  
C4 H41 1.100  
C4 H42 1.100  
C5 C5M 1.459  
C5 C6 1.551  
C5 H5 1.099  
C5M H71 1.100  
C5M H72 1.100  
C5M H73 1.100  
C6 H6 1.100  

Bond Angles for TA3

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
OP3 P OP2 108.3  
OP3 P O5' 102.8  
OP3 P OP1 109.3  
OP2 P O5' 108.7  
OP1 P OP2 117.9  
P OP2 HO2P 109.5  
OP1 P O5' 108.9  
P O5' C5' 130.9  
P OP1 HO1P 109.5  
O5' C5' C4' 113.7  
O5' C5' H5' 108.1  
O5' C5' H5'' 107.1  
C4' C5' H5' 108.1  
C4' C5' H5'' 107.2  
C5' C4' O4' 110.8  
C5' C4' C3' 114.2  
C5' C4' H4' 104.1  
H5' C5' H5'' 112.8  
O4' C4' C3' 105.6  
O4' C4' H4' 112.9  
C4' O4' C1' 108.4  
C3' C4' H4' 109.4  
C4' C3' C2' 102.8  
C4' C3' O3' 111.2  
C4' C3' H3' 113.4  
O4' C1' C2' 104.8  
O4' C1' N1 111.9  
O4' C1' H1' 111.5  
O3' C3' C2' 111.4  
C2' C3' H3' 113.1  
C3' C2' C1' 100.0  
C3' C2' H2' 112.7  
C3' C2' H2'' 114.7  
O3' C3' H3' 105.1  
C3' O3' HO3' 109.5  
C1' C2' H2' 112.8  
C1' C2' H2'' 114.7  
C2' C1' N1 110.9  
C2' C1' H1' 112.5  
H2' C2' H2'' 102.5  
N1 C1' H1' 105.5  
C1' N1 C2 118.7  
C1' N1 C6 116.1  
C2 N1 C6 89.9  
N1 C2 O2 129.7  
N1 C2 N3 90.4  
N1 C6 N3 84.1  
N1 C6 C5 121.5  
N1 C6 H6 111.9  
O2 C2 N3 139.6  
C2 N3 C4 125.6  
C2 N3 C6 85.9  
C4 N3 C6 84.0  
N3 C4 C5 91.0  
N3 C4 H41 116.2  
N3 C4 H42 119.6  
N3 C6 C5 82.4  
N3 C6 H6 142.5  
C5 C4 H41 116.1  
C5 C4 H42 119.6  
C4 C5 C5M 135.4  
C4 C5 C6 88.6  
C4 C5 H5 121.7  
H41 C4 H42 96.2  
C5M C5 C6 129.5  
C5M C5 H5 54.2  
C5 C5M H71 109.5  
C5 C5M H72 109.5  
C5 C5M H73 109.4  
C6 C5 H5 130.8  
C5 C6 H6 113.1  
H71 C5M H72 109.5  
H71 C5M H73 109.5  
H72 C5M H73 109.5  

Torsion Angles for TA3

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
OP2 P OP3 O5' 114.9  
OP1 P OP3 OP2 129.6  
OP3 P OP2 HO2P 330.7  
OP1 P OP3 O5' 244.5  
OP3 P O5' C5' 290.1  
OP3 P OP1 HO1P 198.7  
OP3 P OP2 O5' 249.1  
OP3 P OP2 OP1 124.7  
OP1 P OP2 O5' 124.4  
OP2 P O5' C5' 175.5  
OP2 P OP1 HO1P 322.9  
OP3 P O5' OP2 114.6  
OP3 P O5' OP1 244.2  
OP1 P O5' OP2 230.4  
O5' P OP2 HO2P 81.6  
O5' P OP1 HO1P 87.2  
P O5' C5' C4' 175.9  
P O5' C5' H5' 55.9  
P O5' C5' H5'' 294.0  
OP3 P OP1 OP2 235.8  
OP3 P OP1 O5' 111.5  
OP2 P OP1 O5' 235.7  
OP1 P OP2 HO2P 206.0  
OP1 P O5' C5' 46.0  
HO1P OP1 P OP2 322.9  
HO1P OP1 P O5' 87.2  
HO2P OP2 P O5' 81.6  
C4' C5' O5' H5' 120.0  
C4' C5' O5' H5'' 241.8  
O5' C5' C4' O4' 300.9  
O5' C5' C4' C3' 60.0  
O5' C5' C4' H4' 179.2  
H5' C5' O5' H5'' 121.9  
O5' C5' C4' H5' 240.0  
O5' C5' C4' H5'' 118.1  
H5' C5' C4' H5'' 238.1  
O4' C4' C5' C3' 240.9  
O4' C4' C5' H4' 121.7  
C5' C4' O4' C1' 121.8  
C3' C4' C5' H4' 240.8  
C5' C4' C3' C2' 265.8  
C5' C4' C3' O3' 146.4  
C5' C4' C3' H3' 28.3  
O5' C5' H5' C4' 123.4  
O5' C5' H5' H5'' 241.7  
C4' C5' H5' H5'' 118.3  
H5' C5' C4' O4' 60.9  
H5' C5' C4' C3' 180.0  
H5' C5' C4' H4' 299.2  
O5' C5' H5'' C4' 237.7  
O5' C5' H5'' H5' 118.8  
C4' C5' H5'' H5' 241.2  
H5'' C5' C4' O4' 182.8  
H5'' C5' C4' C3' 301.9  
H5'' C5' C4' H4' 61.1  
O4' C4' C5' H5' 60.9  
O4' C4' C5' H5'' 182.8  
C5' C4' O4' C3' 124.1  
C5' C4' O4' H4' 243.7  
C3' C4' O4' H4' 119.5  
O4' C4' C3' C2' 27.7  
O4' C4' C3' O3' 268.4  
O4' C4' C3' H3' 150.2  
C4' O4' C1' C2' 336.3  
C4' O4' C1' N1 216.1  
C4' O4' C1' H1' 98.3  
C3' C4' C5' H5' 180.0  
C3' C4' C5' H5'' 301.9  
C5' C4' C3' O4' 238.0  
C5' C4' C3' H4' 116.2  
O4' C4' C3' H4' 238.2  
C3' C4' O4' C1' 357.6  
O3' C3' C4' C2' 240.6  
C2' C3' C4' H3' 237.5  
C4' C3' C2' C1' 319.5  
C4' C3' C2' H2' 199.5  
C4' C3' C2' H2'' 82.7  
O3' C3' C4' H3' 118.1  
C4' C3' O3' HO3' 248.9  
H4' C4' C5' H5' 299.2  
H4' C4' C5' H5'' 61.1  
C5' C4' H4' O4' 120.2  
C5' C4' H4' C3' 237.6  
O4' C4' H4' C3' 117.3  
H4' C4' O4' C1' 238.1  
H4' C4' C3' C2' 149.6  
H4' C4' C3' O3' 30.2  
H4' C4' C3' H3' 272.1  
C1' O4' C4' C3' 357.6  
C1' O4' C4' H4' 238.1  
C3' C2' C1' O4' 40.0  
O4' C1' C2' H2' 160.0  
O4' C1' C2' H2'' 276.8  
C2' C1' O4' N1 120.2  
C2' C1' O4' H1' 238.1  
N1 C1' O4' H1' 117.8  
O4' C1' N1 C2 302.7  
O4' C1' N1 C6 48.2  
C2' C3' C4' H4' 149.6  
C4' C3' C2' O3' 240.8  
C4' C3' C2' H3' 122.6  
O4' C1' C2' C3' 40.0  
O3' C3' C2' H3' 241.9  
C2' C3' O3' HO3' 134.8  
C1' C2' C3' H2' 120.0  
C1' C2' C3' H2'' 236.8  
C3' C2' C1' N1 160.9  
C3' C2' C1' H1' 278.7  
H2' C2' C3' H2'' 116.8  
O3' C3' C4' H4' 30.2  
C4' C3' O3' C2' 114.1  
C4' C3' O3' H3' 237.0  
C2' C3' O3' H3' 122.9  
O3' C3' C2' C1' 78.7  
O3' C3' C2' H2' 318.7  
O3' C3' C2' H2'' 201.9  
H3' C3' C4' H4' 272.1  
C4' C3' H3' C2' 243.4  
C4' C3' H3' O3' 121.6  
O3' C3' H3' C2' 121.8  
H3' C3' C2' C1' 196.8  
H3' C3' C2' H2' 76.8  
H3' C3' C2' H2'' 320.0  
H3' C3' O3' HO3' 11.9  
HO3' O3' C3' C2' 134.8  
HO3' O3' C3' H3' 11.9  
O4' C1' C2' N1 239.2  
O4' C1' C2' H1' 121.3  
C1' C2' C3' H3' 196.8  
C3' C2' C1' H2' 240.0  
C3' C2' C1' H2'' 123.2  
H2' C2' C1' H2'' 243.2  
N1 C1' C2' H1' 242.2  
C2' C1' N1 C2 186.2  
C2' C1' N1 C6 291.6  
H2' C2' C3' H3' 76.8  
C3' C2' H2' C1' 112.4  
C3' C2' H2' H2'' 236.2  
C1' C2' H2' H2'' 123.8  
H2' C2' C1' N1 280.9  
H2' C2' C1' H1' 38.7  
H2'' C2' C3' H3' 320.0  
C3' C2' H2'' C1' 245.0  
C3' C2' H2'' H2' 122.5  
C1' C2' H2'' H2' 237.5  
H2'' C2' C1' N1 37.6  
H2'' C2' C1' H1' 155.5  
O4' C1' N1 C2' 116.6  
O4' C1' N1 H1' 238.6  
N1 C1' C2' H2' 280.9  
N1 C1' C2' H2'' 37.6  
C2' C1' N1 H1' 122.0  
C2 N1 C1' C6 254.6  
C1' N1 C2 O2 270.5  
C1' N1 C2 N3 96.0  
C1' N1 C6 N3 260.9  
C1' N1 C6 C5 183.5  
C1' N1 C6 H6 45.7  
O4' C1' H1' C2' 242.6  
O4' C1' H1' N1 121.6  
H1' C1' C2' H2' 38.7  
H1' C1' C2' H2'' 155.5  
C2' C1' H1' N1 239.0  
H1' C1' N1 C2 64.1  
H1' C1' N1 C6 169.6  
C2 N1 C1' H1' 64.1  
C1' N1 C2 C6 120.1  
C2 N1 C6 N3 23.2  
C2 N1 C6 C5 305.8  
C2 N1 C6 H6 168.0  
O2 C2 N1 N3 174.5  
N1 C2 N3 C4 103.4  
N1 C2 N3 C6 23.7  
C6 N1 C1' H1' 169.6  
C1' N1 C6 C2 237.7  
C6 N1 C2 O2 150.4  
C6 N1 C2 N3 335.9  
C2 N3 C6 N1 338.0  
C4 N3 C6 N1 211.6  
N3 C6 N1 C5 77.4  
N3 C6 N1 H6 215.2  
C4 C5 C6 N1 106.2  
C5M C5 C6 N1 260.6  
N1 C6 C5 H5 333.8  
C5 C6 N1 H6 137.8  
O2 C2 N1 C6 150.4  
N1 C2 O2 N3 188.5  
O2 C2 N3 C4 289.9  
O2 C2 N3 C6 210.2  
N3 C2 N1 C6 335.9  
N1 C2 N3 O2 173.4  
N1 C6 N3 C2 338.0  
C4 N3 C2 C6 79.7  
C2 N3 C4 C5 308.2  
C2 N3 C4 H41 188.2  
C2 N3 C4 H42 73.5  
C2 N3 C6 C5 100.9  
C2 N3 C6 H6 219.3  
N1 C6 N3 C4 211.6  
C2 N3 C4 C6 279.3  
C4 N3 C6 C5 334.5  
C4 N3 C6 H6 92.9  
C5 C4 N3 H41 120.0  
C5 C4 N3 H42 234.7  
N3 C4 C5 C5M 179.4  
N3 C4 C5 C6 331.2  
N3 C4 C5 H5 110.1  
H41 C4 N3 H42 114.7  
N1 C6 N3 C5 237.1  
N1 C6 N3 H6 118.7  
C2 N3 C6 C4 126.4  
C6 N3 C4 C5 28.8  
C6 N3 C4 H41 268.9  
C6 N3 C4 H42 154.2  
C4 C5 C6 N3 27.9  
C5M C5 C6 N3 182.3  
N3 C6 C5 H5 255.5  
C5 C6 N3 H6 241.6  
N1 C6 C5 C4 106.2  
C5 C4 N3 C6 28.8  
N3 C4 C5 H41 240.0  
N3 C4 C5 H42 125.4  
N3 C6 C5 C4 27.9  
H41 C4 C5 H42 245.4  
C5M C5 C4 C6 208.3  
C5M C5 C4 H5 69.3  
C4 C5 C5M H71 301.2  
C4 C5 C5M H72 61.2  
C4 C5 C5M H73 181.1  
C6 C5 C4 H5 221.1  
C4 C5 C6 H6 243.5  
H41 C4 N3 C6 268.9  
N3 C4 H41 C5 105.2  
N3 C4 H41 H42 232.6  
C5 C4 H41 H42 127.3  
H41 C4 C5 C5M 299.5  
H41 C4 C5 C6 91.2  
H41 C4 C5 H5 230.1  
H42 C4 N3 C6 154.2  
N3 C4 H42 C5 249.8  
N3 C4 H42 H41 124.9  
C5 C4 H42 H41 235.2  
H42 C4 C5 C5M 54.1  
H42 C4 C5 C6 205.8  
H42 C4 C5 H5 344.8  
N1 C6 C5 C5M 260.6  
N3 C6 C5 C5M 182.3  
C5M C5 C4 H41 299.5  
C5M C5 C4 H42 54.1  
C4 C5 C5M C6 142.2  
C4 C5 C5M H5 258.9  
C6 C5 C5M H5 116.8  
C5M C5 C6 H6 38.0  
H71 C5M C5 H72 240.0  
H71 C5M C5 H73 120.0  
H72 C5M C5 H73 240.0  
N1 C6 C5 N3 78.3  
N1 C6 C5 H6 222.7  
N3 C6 C5 H6 144.4  
C6 C5 C4 H41 91.2  
C6 C5 C4 H42 205.8  
C4 C5 C6 C5M 205.5  
C4 C5 C6 H5 132.4  
C5M C5 C6 H5 286.8  
C6 C5 C5M H71 159.0  
C6 C5 C5M H72 279.0  
C6 C5 C5M H73 39.0  
H5 C5 C4 H41 230.1  
H5 C5 C4 H42 344.8  
C4 C5 H5 C5M 125.9  
C4 C5 H5 C6 240.3  
C5M C5 H5 C6 114.4  
H5 C5 C5M H71 42.2  
H5 C5 C5M H72 162.2  
H5 C5 C5M H73 282.2  
H5 C5 C6 H6 111.1  
H71 C5M C5 C6 159.0  
H71 C5M C5 H5 42.2  
C5 C5M H71 H72 120.0  
C5 C5M H71 H73 240.0  
H72 C5M H71 H73 120.0  
H72 C5M C5 C6 279.0  
H72 C5M C5 H5 162.2  
C5 C5M H72 H71 240.0  
C5 C5M H72 H73 120.0  
H71 C5M H72 H73 240.0  
H73 C5M C5 C6 39.0  
H73 C5M C5 H5 282.2  
C5 C5M H73 H71 120.0  
C5 C5M H73 H72 240.0  
H71 C5M H73 H72 120.0  
N1 C6 H6 N3 250.1  
N1 C6 H6 C5 141.5  
N3 C6 H6 C5 251.4  
H6 C6 C5 H5 111.1