PDB Chemical Component T9N

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for T9N

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C01 N02 1.439 1.464
N02 C03 1.402 1.381
C03 N04 1.374 1.301
C03 S24 1.671 1.709
N04 C05 1.383 1.312
C05 C06 1.511 1.507
C05 C07 1.415 1.354
C07 C08 1.505 1.470
C07 S24 1.663 1.761
C08 N09 1.341 1.333
C08 C21 1.452 1.417
N09 C10 1.361 1.323
C10 N11 1.453 1.382
C10 N19 1.381 1.328
N11 C12 1.470 1.397
C12 C13 1.402 1.388
C12 C18 1.408 1.389
C13 C14 1.395 1.386
C14 O15 1.395 1.359
C14 C16 1.441 1.389
C16 C17 1.381 1.381
C17 C18 1.431 1.382
N19 C20 1.359 1.322
C20 C21 1.403 1.399
C21 C22 1.524 1.432
C22 N23 1.145 1.136
C01 H011 1.100 1.090
C01 H012 1.100 1.091
C01 H013 1.100 1.090
N02 H02 1.000 0.970
C06 H061 1.100 1.090
C06 H062 1.100 1.090
C06 H063 1.100 1.090
N11 H11 1.000 0.971
C13 H13 1.080 1.080
C18 H18 1.080 1.080
O15 H15 0.950 0.967
C16 H16 1.080 1.080
C17 H17 1.080 1.080
C20 H20 1.080 1.079

Bond Angles for T9N

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C01 N02 C03 118.9 120.0
N02 C01 H011 109.5 109.5
N02 C01 H012 109.4 109.5
N02 C01 H013 109.5 109.5
C01 N02 H02 107.0 120.0
N02 C03 N04 129.4 124.9
N02 C03 S24 123.7 124.8
C03 N02 H02 107.1 120.0
N04 C03 S24 106.9 110.3
C03 N04 C05 113.2 117.2
C03 S24 C07 99.8 90.4
N04 C05 C06 121.0 122.9
N04 C05 C07 116.2 114.2
C06 C05 C07 122.8 122.9
C05 C06 H061 109.5 109.4
C05 C06 H062 109.5 109.5
C05 C06 H063 109.4 109.5
C05 C07 C08 128.9 126.0
C05 C07 S24 103.8 107.9
C08 C07 S24 127.2 126.1
C07 C08 N09 121.0 120.7
C07 C08 C21 118.6 120.6
N09 C08 C21 120.2 118.7
C08 N09 C10 118.2 120.7
C08 C21 C20 119.1 118.1
C08 C21 C22 119.3 120.9
N09 C10 N11 117.5 119.0
N09 C10 N19 124.0 122.1
N11 C10 N19 118.4 118.9
C10 N11 C12 121.9 120.0
C10 N11 H11 119.1 120.0
C10 N19 C20 119.5 121.2
N11 C12 C13 117.9 120.1
N11 C12 C18 122.1 120.0
C12 N11 H11 119.0 120.0
C13 C12 C18 119.9 119.9
C12 C13 C14 119.5 119.9
C12 C13 H13 120.3 120.1
C12 C18 C17 120.7 120.0
C12 C18 H18 119.7 120.0
C13 C14 O15 118.1 120.0
C13 C14 C16 121.1 119.9
C14 C13 H13 120.2 120.0
O15 C14 C16 120.8 120.0
C14 O15 H15 109.5 114.0
C14 C16 C17 119.2 120.1
C14 C16 H16 120.4 119.9
C16 C17 C18 119.5 120.2
C17 C16 H16 120.4 120.0
C16 C17 H17 120.2 119.9
C17 C18 H18 119.7 120.0
C18 C17 H17 120.2 119.9
N19 C20 C21 118.9 119.1
N19 C20 H20 120.6 120.4
C20 C21 C22 121.5 120.9
C21 C20 H20 120.6 120.5
C21 C22 N23 177.1 180.0
H011 C01 H012 109.5 109.4
H011 C01 H013 109.5 109.4
H012 C01 H013 109.5 109.5
H061 C06 H062 109.5 109.5
H061 C06 H063 109.5 109.5
H062 C06 H063 109.5 109.5

Torsion Angles for T9N

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C01 N02 C03 N04 120.3 0.1
C01 N02 C03 S24 300.7 179.7
C03 N02 C01 H02 238.7 179.9
H011 C01 N02 H012 240.0 240.0
H011 C01 N02 H013 120.0 120.0
H012 C01 N02 H013 240.0 240.0
C03 N02 C01 H011 180.0 180.0
C03 N02 C01 H012 300.0 299.9
C03 N02 C01 H013 60.0 60.0
C01 N02 C03 H02 121.3 180.1
N04 C03 N02 S24 179.6 180.3
N02 C03 N04 C05 179.6 180.0
N02 C03 S24 C07 181.3 179.9
N02 C03 N04 S24 180.4 179.7
N04 C03 N02 H02 359.0 180.0
N04 C03 S24 C07 1.7 359.7
C03 N04 C05 C06 179.5 180.0
C03 N04 C05 C07 359.4 0.0
N02 C03 S24 N04 179.7 180.3
S24 C03 N02 H02 179.4 359.7
S24 C03 N04 C05 359.2 0.2
C05 C07 S24 C03 358.1 0.3
C08 C07 S24 C03 177.0 180.0
C05 N04 C03 S24 359.2 0.2
C06 C05 N04 C07 180.1 179.9
N04 C05 C06 H061 0.0 90.0
N04 C05 C06 H062 120.0 210.0
N04 C05 C06 H063 240.0 330.0
N04 C05 C07 C08 182.8 180.0
N04 C05 C07 S24 1.7 359.7
N04 C05 C06 C07 179.9 180.1
C06 C05 C07 C08 2.7 0.1
C06 C05 C07 S24 181.6 179.8
H061 C06 C05 H062 240.0 240.0
H061 C06 C05 H063 120.0 120.0
H062 C06 C05 H063 240.0 240.0
C03 S24 C07 C05 358.1 0.3
N04 C05 C07 C06 180.1 179.9
C07 C05 C06 H061 180.1 269.9
C07 C05 C06 H062 300.1 29.9
C07 C05 C06 H063 60.1 149.9
C08 C07 C05 S24 181.1 180.3
C05 C07 C08 N09 211.0 360.0
C05 C07 C08 C21 35.0 179.7
C03 S24 C07 C08 177.0 180.0
C05 C07 C08 S24 178.7 179.6
N09 C08 C07 C21 176.0 180.3
C07 C08 N09 C10 181.2 180.0
C07 C08 C21 C20 179.3 179.8
C07 C08 C21 C22 1.3 0.0
C05 C07 S24 C08 181.1 180.3
S24 C07 C08 N09 32.3 180.4
S24 C07 C08 C21 216.3 0.0
N09 C08 C07 S24 32.3 180.4
C07 C08 N09 C21 184.0 179.7
N09 C08 C21 C20 3.2 359.5
N09 C08 C21 C22 185.2 179.7
C08 N09 C10 N11 182.5 180.0
C08 N09 C10 N19 0.9 360.0
C21 C08 C07 S24 216.3 0.0
C07 C08 C21 N09 176.1 180.3
C21 C08 N09 C10 357.1 0.3
N19 C20 C21 C08 358.5 0.5
C20 C21 C08 C22 178.0 179.7
C08 C21 C20 H20 178.5 180.2
C08 C21 C22 N23 271.3 317.9
C10 N09 C08 C21 357.1 0.3
N11 C10 N09 N19 181.5 180.0
N09 C10 N11 C12 334.1 174.5
N09 C10 N11 H11 154.1 354.5
N09 C10 N19 C20 0.8 0.0
N09 C10 N11 N19 178.6 180.0
N11 C10 N19 C20 179.2 180.0
C10 N11 C12 C13 209.6 146.2
C10 N11 C12 C18 30.3 326.0
C12 N11 C10 H11 180.0 180.0
N09 C10 N19 N11 181.5 180.0
N19 C10 N11 C12 155.5 354.5
N19 C10 N11 H11 335.5 174.5
C10 N19 C20 C21 359.6 359.7
C10 N19 C20 H20 179.6 180.0
C12 N11 C10 N19 155.5 354.5
C10 N11 C12 H11 180.0 180.0
C13 C12 N11 C18 179.3 180.2
N11 C12 C13 C14 179.4 180.0
N11 C12 C13 H13 359.4 0.0
N11 C12 C18 C17 180.0 179.8
N11 C12 C18 H18 360.0 359.9
N11 C12 C13 C18 180.6 179.8
C13 C12 N11 H11 29.6 326.2
C13 C12 C18 C17 0.7 359.6
C13 C12 C18 H18 180.7 179.7
C12 C13 C14 O15 181.3 180.0
C12 C13 C14 C16 1.2 0.0
C14 C13 C12 H13 180.0 179.9
N11 C12 C18 C13 179.3 180.2
C18 C12 N11 H11 210.3 146.0
C18 C12 C13 C14 358.8 0.2
C18 C12 C13 H13 178.8 180.3
C16 C17 C18 C12 360.0 0.5
C17 C18 C12 H18 180.0 179.8
C12 C18 C17 H17 179.9 180.2
C14 C13 C12 C18 358.8 0.2
C12 C13 C14 H13 180.0 180.1
O15 C14 C13 C16 180.1 180.0
C13 C14 O15 H15 180.0 90.0
C13 C14 C16 C17 359.4 360.0
C13 C14 C16 H16 179.5 179.9
C13 C14 O15 C16 179.9 180.0
O15 C14 C13 H13 1.2 360.0
O15 C14 C16 C17 179.4 180.0
O15 C14 C16 H16 359.4 359.9
C13 C14 C16 O15 180.1 180.0
C16 C14 C13 H13 181.2 180.0
C16 C14 O15 H15 0.1 270.0
C14 C16 C17 C18 360.0 359.8
C17 C16 C14 H16 180.0 180.0
C14 C16 C17 H17 180.0 180.0
C12 C18 C17 C16 360.0 0.5
C14 C16 C17 H16 180.0 180.0
C16 C17 C18 H18 180.0 180.3
C18 C17 C16 H17 180.0 179.8
C12 C18 C17 H18 180.0 180.2
C18 C17 C16 H16 180.0 179.8
C16 C17 C18 H17 180.0 180.2
C08 C21 C20 N19 358.5 0.5
N19 C20 C21 C22 176.4 180.3
C21 C20 N19 H20 180.0 179.7
C08 C21 C20 C22 182.1 180.3
N19 C20 C21 H20 180.0 180.3
C20 C21 C22 N23 93.4 138.1
C08 C21 C22 C20 177.9 179.7
C22 C21 C20 H20 356.4 360.0
H011 C01 N02 C03 180.0 180.0
N02 C01 H011 H012 120.0 120.0
N02 C01 H011 H013 240.0 239.9
H011 C01 N02 H02 301.3 0.1
H012 C01 H011 H013 120.0 119.9
H012 C01 N02 C03 300.0 299.9
N02 C01 H012 H011 240.0 240.0
N02 C01 H012 H013 120.0 120.1
H012 C01 N02 H02 61.3 120.0
H011 C01 H012 H013 240.0 240.1
H013 C01 N02 C03 60.0 60.0
N02 C01 H013 H011 120.0 120.0
N02 C01 H013 H012 240.0 239.9
H013 C01 N02 H02 181.3 240.1
H011 C01 H013 H012 120.0 119.9
C01 N02 H02 C03 231.5 179.9
H02 N02 C01 H011 301.3 0.1
H02 N02 C01 H012 61.3 120.0
H02 N02 C01 H013 181.3 240.1
H02 N02 C03 N04 359.0 180.0
H02 N02 C03 S24 179.4 359.7
H061 C06 C05 C07 180.1 269.9
C05 C06 H061 H062 120.0 119.9
C05 C06 H061 H063 240.0 240.0
H062 C06 H061 H063 120.0 120.1
H062 C06 C05 C07 300.1 29.9
C05 C06 H062 H061 240.0 240.1
C05 C06 H062 H063 120.0 120.0
H061 C06 H062 H063 240.0 240.0
H063 C06 C05 C07 60.1 149.9
C05 C06 H063 H061 120.0 120.0
C05 C06 H063 H062 240.0 240.0
H061 C06 H063 H062 120.0 120.0
H11 N11 C10 N19 335.5 174.5
C10 N11 H11 C12 180.0 180.0
H11 N11 C12 C13 29.6 326.2
H11 N11 C12 C18 210.3 146.0
H13 C13 C12 C18 178.8 180.3
C12 C13 H13 C14 180.0 179.9
H13 C13 C14 O15 1.2 360.0
H13 C13 C14 C16 181.2 180.0
C12 C18 H18 C17 180.0 179.8
H18 C18 C17 H17 360.0 0.1
H15 O15 C14 C16 0.1 270.0
C14 C16 H16 C17 180.0 180.0
H16 C16 C17 C18 180.0 179.8
H16 C16 C17 H17 360.0 0.0
C16 C17 H17 C18 180.0 179.8
H17 C17 C16 H16 360.0 0.0
H17 C17 C18 H18 360.0 0.1
N19 C20 H20 C21 180.0 179.7
H20 C20 C21 C22 356.4 360.0