PDB Chemical Component T8P
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for T8P
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O |
C |
1.426 |
1.429 |
C1 |
O |
1.370 |
1.361 |
C2 |
C1 |
1.388 |
1.387 |
C3 |
C2 |
1.382 |
1.381 |
C4 |
C3 |
1.396 |
1.389 |
C4 |
C5 |
1.397 |
1.388 |
C5 |
C6 |
1.383 |
1.381 |
C6 |
C1 |
1.388 |
1.387 |
N |
C4 |
1.386 |
1.399 |
C7 |
N |
1.475 |
1.469 |
C8 |
C7 |
1.512 |
1.533 |
N1 |
C8 |
1.454 |
1.472 |
N1 |
C9 |
1.456 |
1.471 |
C9 |
C10 |
1.512 |
1.532 |
C10 |
N |
1.477 |
1.469 |
C11 |
N1 |
1.353 |
1.347 |
C11 |
O1 |
1.224 |
1.212 |
C12 |
C11 |
1.509 |
1.508 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.081 |
C7 |
H7 |
1.100 |
1.091 |
C7 |
H8 |
1.100 |
1.089 |
C8 |
H9 |
1.100 |
1.090 |
C8 |
H10 |
1.100 |
1.090 |
C10 |
H13 |
1.101 |
1.090 |
C10 |
H14 |
1.100 |
1.090 |
C |
H2 |
1.100 |
1.090 |
C |
H1 |
1.100 |
1.090 |
C |
H |
1.100 |
1.090 |
C12 |
H17 |
1.100 |
1.090 |
C12 |
H15 |
1.100 |
1.089 |
C12 |
H16 |
1.100 |
1.089 |
C2 |
H3 |
1.080 |
1.079 |
C3 |
H4 |
1.081 |
1.080 |
C9 |
H11 |
1.100 |
1.090 |
C9 |
H12 |
1.100 |
1.090 |
Bond Angles for T8P
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O |
C |
H2 |
109.5 |
109.4 |
O |
C |
H1 |
109.5 |
109.5 |
O |
C |
H |
109.4 |
109.5 |
C6 |
C1 |
O |
119.0 |
120.0 |
C4 |
C3 |
C2 |
121.3 |
120.0 |
C3 |
C2 |
H3 |
120.0 |
120.0 |
C5 |
C4 |
C3 |
118.0 |
119.9 |
N |
C4 |
C3 |
120.3 |
120.0 |
C4 |
C3 |
H4 |
119.4 |
120.0 |
C4 |
C5 |
C6 |
121.0 |
120.0 |
C4 |
C5 |
H5 |
119.5 |
120.0 |
C5 |
C6 |
C1 |
120.1 |
120.0 |
C6 |
C5 |
H5 |
119.5 |
120.0 |
C5 |
C6 |
H6 |
120.0 |
120.0 |
C1 |
C6 |
H6 |
119.9 |
120.0 |
C8 |
C7 |
N |
114.6 |
109.3 |
C7 |
N |
C10 |
120.4 |
111.3 |
N |
C7 |
H7 |
108.2 |
109.5 |
N |
C7 |
H8 |
108.2 |
109.5 |
N1 |
C8 |
C7 |
109.5 |
108.5 |
C8 |
C7 |
H7 |
108.2 |
109.5 |
C8 |
C7 |
H8 |
108.2 |
109.5 |
C8 |
N1 |
C9 |
109.2 |
118.2 |
N1 |
C8 |
H9 |
109.5 |
109.7 |
N1 |
C8 |
H10 |
109.5 |
109.6 |
N1 |
C9 |
C10 |
109.6 |
108.5 |
C11 |
N1 |
C9 |
128.1 |
120.9 |
N1 |
C9 |
H11 |
109.4 |
109.6 |
N1 |
C9 |
H12 |
109.4 |
109.6 |
C9 |
C10 |
H13 |
108.2 |
109.5 |
C9 |
C10 |
H14 |
108.2 |
109.5 |
N |
C10 |
H13 |
108.2 |
109.4 |
N |
C10 |
H14 |
108.2 |
109.5 |
C12 |
C11 |
O1 |
119.3 |
120.0 |
H7 |
C7 |
H8 |
109.5 |
109.5 |
H9 |
C8 |
H10 |
109.5 |
109.8 |
H13 |
C10 |
H14 |
109.5 |
109.5 |
H2 |
C |
H1 |
109.4 |
109.5 |
H2 |
C |
H |
109.5 |
109.5 |
H1 |
C |
H |
109.5 |
109.4 |
H17 |
C12 |
H15 |
109.4 |
109.5 |
H17 |
C12 |
H16 |
109.4 |
109.5 |
H15 |
C12 |
H16 |
109.5 |
109.5 |
H11 |
C9 |
H12 |
109.5 |
109.8 |
Torsion Angles for T8P
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
O |
C |
152.9 |
180.0 |
H2 |
C |
O |
H1 |
240.0 |
240.0 |
H2 |
C |
O |
H |
120.0 |
120.0 |
H1 |
C |
O |
H |
240.0 |
240.0 |
C1 |
O |
C |
H2 |
180.0 |
180.0 |
C1 |
O |
C |
H1 |
300.0 |
300.1 |
C1 |
O |
C |
H |
60.0 |
60.0 |
C5 |
C6 |
C1 |
O |
179.9 |
179.9 |
O |
C1 |
C6 |
H6 |
360.0 |
360.0 |
C4 |
C3 |
C2 |
C1 |
0.6 |
0.1 |
C2 |
C1 |
C6 |
H6 |
180.1 |
180.0 |
C5 |
C4 |
C3 |
C2 |
359.0 |
359.9 |
N |
C4 |
C3 |
C2 |
180.7 |
179.7 |
C4 |
C3 |
C2 |
H4 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
H3 |
180.7 |
180.0 |
C3 |
C4 |
C5 |
C6 |
0.9 |
0.0 |
C3 |
C4 |
C5 |
H5 |
180.9 |
180.0 |
N |
C4 |
C5 |
C3 |
178.3 |
180.2 |
C5 |
C4 |
C3 |
H4 |
179.0 |
180.0 |
C4 |
C5 |
C6 |
C1 |
359.5 |
360.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
H6 |
179.5 |
180.0 |
C6 |
C5 |
C4 |
C3 |
0.9 |
0.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
H5 |
179.5 |
180.0 |
C5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
C5 |
C4 |
N |
C3 |
181.8 |
179.8 |
N |
C4 |
C3 |
H4 |
0.7 |
359.7 |
N |
C4 |
C5 |
H5 |
359.2 |
0.2 |
C7 |
N |
C4 |
C3 |
336.9 |
179.9 |
N1 |
C8 |
C7 |
N |
317.4 |
306.2 |
C8 |
C7 |
N |
H7 |
239.2 |
119.9 |
C8 |
C7 |
N |
H8 |
120.8 |
240.0 |
C7 |
N |
C10 |
H13 |
219.1 |
56.9 |
C7 |
N |
C10 |
H14 |
100.6 |
176.9 |
H7 |
C7 |
N |
H8 |
241.5 |
120.1 |
C8 |
C7 |
N |
C10 |
20.4 |
63.0 |
N |
C7 |
C8 |
H7 |
120.7 |
240.1 |
N |
C7 |
C8 |
H8 |
239.2 |
120.0 |
C7 |
C8 |
N1 |
C9 |
67.5 |
51.2 |
N1 |
C8 |
C7 |
H9 |
240.0 |
119.7 |
N1 |
C8 |
C7 |
H10 |
120.0 |
240.3 |
H7 |
C7 |
C8 |
H8 |
118.5 |
239.9 |
N1 |
C8 |
C7 |
H7 |
196.7 |
66.1 |
N1 |
C8 |
C7 |
H8 |
78.2 |
186.2 |
C8 |
N1 |
C9 |
C10 |
292.7 |
308.8 |
C11 |
N1 |
C8 |
C9 |
183.6 |
180.3 |
C8 |
N1 |
C9 |
H11 |
52.7 |
68.6 |
C8 |
N1 |
C9 |
H12 |
172.7 |
189.1 |
H9 |
C8 |
N1 |
H10 |
120.0 |
239.4 |
C9 |
N1 |
C8 |
C7 |
67.5 |
51.2 |
C9 |
N1 |
C8 |
H9 |
307.5 |
170.9 |
C9 |
N1 |
C8 |
H10 |
187.5 |
291.5 |
N1 |
C9 |
C10 |
H13 |
162.8 |
293.9 |
N1 |
C9 |
C10 |
H14 |
281.3 |
173.8 |
H11 |
C9 |
N1 |
H12 |
240.1 |
239.5 |
C11 |
N1 |
C9 |
C10 |
108.9 |
128.6 |
N1 |
C9 |
C10 |
H11 |
120.0 |
119.7 |
N1 |
C9 |
C10 |
H12 |
240.0 |
240.3 |
N |
C10 |
C9 |
H13 |
239.2 |
119.9 |
N |
C10 |
C9 |
H14 |
120.7 |
240.0 |
H13 |
C10 |
C9 |
H14 |
241.5 |
120.1 |
C10 |
N |
C4 |
C3 |
151.9 |
304.3 |
C10 |
N |
C7 |
H7 |
141.2 |
303.1 |
C10 |
N |
C7 |
H8 |
259.7 |
183.1 |
N1 |
C9 |
C10 |
N |
42.1 |
53.8 |
C9 |
C10 |
N |
H13 |
120.8 |
240.1 |
C9 |
C10 |
N |
H14 |
239.3 |
120.1 |
H13 |
C10 |
N |
H14 |
118.5 |
240.0 |
C8 |
N1 |
C11 |
C9 |
175.7 |
179.7 |
C11 |
N1 |
C8 |
H9 |
131.0 |
351.1 |
C11 |
N1 |
C8 |
H10 |
11.1 |
111.8 |
C11 |
N1 |
C9 |
H11 |
228.9 |
248.3 |
C11 |
N1 |
C9 |
H12 |
348.8 |
8.8 |
O1 |
C11 |
N1 |
C9 |
189.6 |
180.3 |
C12 |
C11 |
N1 |
C9 |
9.8 |
0.3 |
H5 |
C5 |
C4 |
C3 |
180.9 |
180.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.0 |
H5 |
C5 |
C6 |
C1 |
179.5 |
180.0 |
H5 |
C5 |
C6 |
H6 |
359.5 |
360.0 |
H6 |
C6 |
C1 |
O |
360.0 |
360.0 |
C5 |
C6 |
H6 |
C1 |
180.0 |
180.0 |
H6 |
C6 |
C5 |
H5 |
359.5 |
360.0 |
C8 |
C7 |
H7 |
N |
124.7 |
240.2 |
H7 |
C7 |
N |
C10 |
141.2 |
303.1 |
N |
C7 |
H7 |
H8 |
117.7 |
239.9 |
C8 |
C7 |
H7 |
H8 |
242.3 |
120.1 |
C8 |
C7 |
H8 |
N |
235.3 |
119.9 |
H8 |
C7 |
N |
C10 |
259.7 |
183.1 |
N |
C7 |
H8 |
H7 |
242.4 |
120.0 |
C8 |
C7 |
H8 |
H7 |
117.7 |
240.0 |
H9 |
C8 |
C7 |
N |
77.4 |
186.5 |
N1 |
C8 |
H9 |
C7 |
120.0 |
241.0 |
H9 |
C8 |
C7 |
H7 |
316.7 |
306.4 |
H9 |
C8 |
C7 |
H8 |
198.2 |
66.4 |
H9 |
C8 |
N1 |
C9 |
307.5 |
170.9 |
N1 |
C8 |
H9 |
H10 |
240.0 |
120.5 |
H10 |
C8 |
C7 |
N |
197.4 |
65.9 |
N1 |
C8 |
H10 |
C7 |
240.0 |
119.0 |
H10 |
C8 |
C7 |
H7 |
76.7 |
185.8 |
H10 |
C8 |
C7 |
H8 |
318.2 |
305.8 |
H10 |
C8 |
N1 |
C9 |
187.5 |
291.5 |
N1 |
C8 |
H10 |
H9 |
120.0 |
239.5 |
C9 |
C10 |
H13 |
H14 |
117.7 |
239.9 |
N |
C10 |
H13 |
H14 |
242.3 |
120.0 |
C9 |
C10 |
H14 |
H13 |
242.3 |
120.1 |
N |
C10 |
H14 |
H13 |
117.7 |
240.0 |
O |
C |
H2 |
H1 |
120.0 |
120.0 |
O |
C |
H2 |
H |
240.0 |
240.0 |
H1 |
C |
H2 |
H |
120.0 |
120.0 |
O |
C |
H1 |
H2 |
240.0 |
240.0 |
O |
C |
H1 |
H |
120.0 |
120.0 |
H2 |
C |
H1 |
H |
240.0 |
240.0 |
O |
C |
H |
H2 |
120.0 |
120.0 |
O |
C |
H |
H1 |
240.0 |
240.0 |
H2 |
C |
H |
H1 |
120.0 |
120.0 |
H17 |
C12 |
C11 |
O1 |
360.0 |
240.0 |
H15 |
C12 |
H17 |
H16 |
120.0 |
120.1 |
H15 |
C12 |
C11 |
O1 |
120.0 |
360.0 |
H17 |
C12 |
H15 |
H16 |
240.0 |
240.0 |
H16 |
C12 |
C11 |
O1 |
240.0 |
120.0 |
H17 |
C12 |
H16 |
H15 |
120.0 |
120.1 |
C4 |
C3 |
H4 |
C2 |
180.0 |
180.0 |
H4 |
C3 |
C2 |
H3 |
0.7 |
360.0 |
N1 |
C9 |
H11 |
C10 |
239.9 |
240.9 |
N1 |
C9 |
H11 |
H12 |
119.9 |
120.4 |
H11 |
C9 |
C10 |
H13 |
42.8 |
174.2 |
H11 |
C9 |
C10 |
H14 |
161.3 |
54.1 |
N1 |
C9 |
H12 |
C10 |
120.2 |
119.0 |
N1 |
C9 |
H12 |
H11 |
240.1 |
239.6 |
H12 |
C9 |
C10 |
H13 |
282.8 |
53.6 |
H12 |
C9 |
C10 |
H14 |
41.4 |
293.5 |