PDB Chemical Component T8A
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for T8A
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O01 |
C02 |
1.224 |
1.213 |
C02 |
C03 |
1.503 |
1.507 |
C02 |
N05 |
1.361 |
1.348 |
N05 |
C06 |
1.464 |
1.471 |
C06 |
C07 |
1.503 |
1.509 |
C07 |
C08 |
1.396 |
1.388 |
C08 |
C09 |
1.382 |
1.381 |
C09 |
C10 |
1.381 |
1.382 |
C10 |
C11 |
1.386 |
1.380 |
C11 |
C12 |
1.401 |
1.389 |
C12 |
C13 |
1.525 |
1.506 |
C14 |
C15 |
1.389 |
1.383 |
C15 |
C16 |
1.385 |
1.383 |
C16 |
C17 |
1.376 |
1.383 |
C17 |
C18 |
1.375 |
1.382 |
C18 |
C19 |
1.386 |
1.383 |
C13 |
C14 |
1.515 |
1.507 |
C13 |
C20 |
1.527 |
1.528 |
N05 |
C20 |
1.464 |
1.472 |
C07 |
C12 |
1.399 |
1.377 |
C14 |
C19 |
1.389 |
1.382 |
C10 |
H101 |
1.080 |
1.080 |
C13 |
H131 |
1.100 |
1.090 |
C15 |
H151 |
1.080 |
1.080 |
C17 |
H171 |
1.080 |
1.079 |
C20 |
H201 |
1.100 |
1.089 |
C20 |
H202 |
1.100 |
1.090 |
C03 |
H031 |
1.100 |
1.090 |
C03 |
H1 |
1.100 |
1.090 |
C03 |
H032 |
1.100 |
1.090 |
C06 |
H061 |
1.100 |
1.089 |
C06 |
H062 |
1.100 |
1.090 |
C08 |
H081 |
1.080 |
1.080 |
C09 |
H091 |
1.080 |
1.080 |
C11 |
H111 |
1.080 |
1.080 |
C16 |
H161 |
1.080 |
1.080 |
C18 |
H181 |
1.080 |
1.080 |
C19 |
H191 |
1.080 |
1.080 |
Bond Angles for T8A
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C03 |
C02 |
N05 |
118.6 |
120.0 |
C02 |
C03 |
H031 |
109.5 |
109.6 |
C02 |
C03 |
H1 |
109.5 |
109.4 |
C02 |
C03 |
H032 |
109.5 |
109.5 |
C02 |
N05 |
C06 |
120.4 |
121.3 |
N05 |
C06 |
H061 |
109.3 |
109.0 |
N05 |
C06 |
H062 |
109.3 |
110.0 |
C06 |
C07 |
C08 |
119.1 |
117.8 |
C06 |
C07 |
C12 |
121.0 |
122.3 |
C07 |
C06 |
H061 |
109.3 |
109.4 |
C07 |
C06 |
H062 |
109.3 |
109.4 |
C07 |
C08 |
C09 |
120.7 |
120.5 |
C08 |
C07 |
C12 |
119.8 |
119.9 |
C07 |
C08 |
H081 |
119.7 |
119.8 |
C09 |
C08 |
H081 |
119.7 |
119.7 |
C08 |
C09 |
H091 |
120.0 |
120.1 |
C09 |
C10 |
C11 |
120.0 |
119.9 |
C09 |
C10 |
H101 |
120.0 |
120.1 |
C10 |
C11 |
C12 |
120.9 |
120.6 |
C11 |
C10 |
H101 |
120.0 |
120.1 |
C10 |
C11 |
H111 |
119.5 |
119.7 |
C07 |
C12 |
C11 |
118.6 |
119.5 |
C12 |
C11 |
H111 |
119.5 |
119.7 |
C12 |
C13 |
C14 |
113.7 |
109.2 |
C12 |
C13 |
H131 |
106.8 |
109.2 |
C14 |
C15 |
C16 |
120.8 |
120.0 |
C13 |
C14 |
C15 |
120.9 |
120.0 |
C14 |
C15 |
H151 |
119.6 |
120.0 |
C15 |
C16 |
C17 |
120.2 |
120.0 |
C16 |
C15 |
H151 |
119.6 |
120.0 |
C15 |
C16 |
H161 |
119.9 |
120.0 |
C16 |
C17 |
C18 |
119.8 |
120.0 |
C16 |
C17 |
H171 |
120.1 |
120.0 |
C17 |
C18 |
C19 |
120.1 |
120.0 |
C18 |
C17 |
H171 |
120.2 |
120.0 |
C17 |
C18 |
H181 |
119.9 |
120.0 |
C14 |
C19 |
C18 |
120.9 |
120.0 |
C19 |
C18 |
H181 |
119.9 |
120.0 |
C18 |
C19 |
H191 |
119.6 |
120.0 |
C20 |
C13 |
C14 |
110.1 |
109.2 |
C13 |
C14 |
C19 |
121.0 |
120.0 |
C14 |
C13 |
H131 |
106.8 |
109.2 |
C20 |
C13 |
H131 |
106.7 |
109.2 |
C13 |
C20 |
H201 |
109.2 |
109.8 |
C13 |
C20 |
H202 |
109.3 |
109.8 |
N05 |
C20 |
H201 |
109.2 |
109.8 |
N05 |
C20 |
H202 |
109.2 |
109.8 |
C14 |
C19 |
H191 |
119.6 |
120.0 |
H201 |
C20 |
H202 |
109.5 |
109.8 |
H031 |
C03 |
H1 |
109.4 |
109.5 |
H031 |
C03 |
H032 |
109.5 |
109.5 |
H1 |
C03 |
H032 |
109.5 |
109.4 |
H061 |
C06 |
H062 |
109.5 |
109.5 |
Torsion Angles for T8A
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O01 |
C02 |
C03 |
H031 |
360.0 |
264.7 |
O01 |
C02 |
C03 |
H1 |
120.0 |
24.7 |
O01 |
C02 |
C03 |
H032 |
240.0 |
144.6 |
C03 |
C02 |
N05 |
C06 |
166.2 |
184.9 |
H031 |
C03 |
C02 |
H1 |
240.0 |
240.0 |
H031 |
C03 |
C02 |
H032 |
120.0 |
120.1 |
H1 |
C03 |
C02 |
H032 |
240.0 |
240.1 |
N05 |
C02 |
C03 |
H031 |
180.4 |
84.6 |
N05 |
C02 |
C03 |
H1 |
300.4 |
204.6 |
N05 |
C02 |
C03 |
H032 |
60.4 |
324.5 |
C02 |
N05 |
C06 |
H061 |
243.2 |
16.0 |
C02 |
N05 |
C06 |
H062 |
2.9 |
255.9 |
C02 |
N05 |
C20 |
H201 |
127.2 |
123.9 |
C02 |
N05 |
C20 |
H202 |
7.5 |
3.1 |
C07 |
C06 |
N05 |
H061 |
239.9 |
119.7 |
C07 |
C06 |
N05 |
H062 |
120.1 |
239.8 |
C06 |
N05 |
C20 |
H201 |
305.8 |
305.3 |
C06 |
N05 |
C20 |
H202 |
186.1 |
184.5 |
H061 |
C06 |
N05 |
H062 |
240.3 |
120.1 |
C02 |
N05 |
C06 |
C07 |
123.0 |
135.6 |
N05 |
C06 |
C07 |
H061 |
120.1 |
240.6 |
N05 |
C06 |
C07 |
H062 |
239.8 |
120.6 |
C06 |
C07 |
C08 |
C09 |
180.0 |
180.5 |
C08 |
C07 |
C06 |
C12 |
179.6 |
179.1 |
C06 |
C07 |
C08 |
H081 |
0.0 |
0.4 |
C06 |
C07 |
C12 |
C11 |
180.5 |
178.9 |
H061 |
C06 |
C07 |
H062 |
119.7 |
240.0 |
C06 |
C07 |
C08 |
C12 |
180.4 |
180.9 |
C08 |
C07 |
C06 |
H061 |
82.4 |
311.6 |
C08 |
C07 |
C06 |
H062 |
322.6 |
71.5 |
C09 |
C08 |
C07 |
H081 |
180.0 |
180.1 |
C07 |
C08 |
C09 |
H091 |
179.9 |
180.7 |
C08 |
C07 |
C12 |
C11 |
0.8 |
359.8 |
C09 |
C08 |
C07 |
C12 |
359.7 |
359.6 |
C07 |
C08 |
C09 |
H081 |
180.0 |
179.9 |
C08 |
C09 |
C10 |
C11 |
0.1 |
359.8 |
C08 |
C09 |
C10 |
H101 |
180.1 |
179.5 |
C09 |
C10 |
C11 |
C12 |
0.4 |
359.6 |
C11 |
C10 |
C09 |
H101 |
180.0 |
180.3 |
C09 |
C10 |
C11 |
H111 |
180.4 |
179.7 |
C09 |
C10 |
C11 |
H101 |
180.0 |
179.7 |
C07 |
C12 |
C11 |
C10 |
359.1 |
0.6 |
C12 |
C11 |
C10 |
H111 |
180.0 |
179.9 |
C12 |
C11 |
C10 |
H101 |
180.4 |
180.0 |
C10 |
C11 |
C12 |
H111 |
180.0 |
180.1 |
C11 |
C12 |
C13 |
C14 |
313.9 |
319.3 |
C11 |
C12 |
C13 |
H131 |
71.4 |
78.7 |
C10 |
C11 |
C12 |
C13 |
180.6 |
181.7 |
C12 |
C13 |
C14 |
C15 |
123.8 |
118.6 |
C20 |
C13 |
C12 |
C14 |
234.2 |
239.7 |
C12 |
C13 |
C14 |
C19 |
303.6 |
298.6 |
C14 |
C13 |
C12 |
H131 |
242.4 |
240.6 |
C20 |
C13 |
C12 |
H131 |
116.7 |
120.3 |
C12 |
C13 |
C20 |
H201 |
80.1 |
72.1 |
C12 |
C13 |
C20 |
H202 |
199.8 |
192.9 |
C14 |
C15 |
C16 |
C17 |
359.6 |
359.7 |
C16 |
C15 |
C14 |
H151 |
180.0 |
180.3 |
C14 |
C15 |
C16 |
H161 |
179.6 |
179.6 |
C20 |
C13 |
C14 |
C15 |
250.8 |
240.0 |
C13 |
C14 |
C15 |
C19 |
179.8 |
180.0 |
C15 |
C14 |
C13 |
H131 |
6.3 |
359.3 |
C13 |
C14 |
C15 |
C16 |
180.1 |
180.0 |
C14 |
C15 |
C16 |
H151 |
180.0 |
179.7 |
C15 |
C16 |
C17 |
C18 |
0.2 |
0.5 |
C15 |
C16 |
C17 |
H171 |
180.2 |
180.0 |
C17 |
C16 |
C15 |
H151 |
179.6 |
180.0 |
C15 |
C16 |
C17 |
H161 |
180.0 |
179.9 |
C16 |
C17 |
C18 |
C19 |
360.0 |
359.5 |
C18 |
C17 |
C16 |
H171 |
180.0 |
180.6 |
C16 |
C17 |
C18 |
H181 |
180.0 |
179.4 |
C16 |
C17 |
C18 |
H171 |
180.0 |
179.4 |
C14 |
C19 |
C18 |
C17 |
360.0 |
0.3 |
C19 |
C18 |
C17 |
H181 |
180.0 |
180.0 |
C17 |
C18 |
C19 |
H191 |
180.0 |
180.4 |
C19 |
C18 |
C17 |
H171 |
180.0 |
180.0 |
C17 |
C18 |
C19 |
H181 |
180.0 |
180.0 |
C13 |
C14 |
C19 |
C18 |
180.1 |
180.0 |
C14 |
C19 |
C18 |
H191 |
180.0 |
179.9 |
C12 |
C13 |
C14 |
H131 |
117.5 |
119.3 |
C13 |
C14 |
C15 |
H151 |
0.1 |
359.7 |
C20 |
C13 |
C14 |
H131 |
244.5 |
240.7 |
C14 |
C13 |
C20 |
H201 |
312.3 |
311.8 |
C14 |
C13 |
C20 |
H202 |
72.0 |
72.6 |
C13 |
C14 |
C19 |
H191 |
0.1 |
359.9 |
C12 |
C13 |
C20 |
C14 |
127.8 |
120.3 |
C12 |
C13 |
C20 |
H131 |
243.3 |
239.7 |
C20 |
C13 |
C14 |
C19 |
70.6 |
60.0 |
C14 |
C13 |
C20 |
H131 |
115.6 |
119.3 |
N05 |
C20 |
C13 |
H201 |
239.9 |
240.4 |
N05 |
C20 |
C13 |
H202 |
120.2 |
119.6 |
H201 |
C20 |
C13 |
H202 |
240.3 |
239.2 |
N05 |
C20 |
C13 |
H131 |
76.6 |
72.8 |
C13 |
C20 |
N05 |
H201 |
120.1 |
119.6 |
C13 |
C20 |
N05 |
H202 |
239.8 |
240.4 |
H201 |
C20 |
N05 |
H202 |
119.7 |
120.8 |
C06 |
C07 |
C12 |
C08 |
179.6 |
179.1 |
C12 |
C07 |
C06 |
H061 |
262.7 |
132.5 |
C12 |
C07 |
C06 |
H062 |
143.0 |
252.4 |
C12 |
C07 |
C08 |
C09 |
359.7 |
359.6 |
C12 |
C07 |
C08 |
H081 |
179.7 |
179.5 |
C10 |
C11 |
C12 |
C07 |
359.1 |
0.6 |
C07 |
C12 |
C11 |
H111 |
179.1 |
180.5 |
C07 |
C12 |
C13 |
C14 |
135.4 |
140.5 |
C07 |
C12 |
C13 |
H131 |
252.9 |
259.9 |
C19 |
C14 |
C15 |
C16 |
0.4 |
-0.0 |
C13 |
C14 |
C19 |
C15 |
180.2 |
180.0 |
C19 |
C14 |
C15 |
H151 |
180.4 |
179.7 |
C17 |
C18 |
C19 |
C14 |
360.0 |
0.3 |
C14 |
C19 |
C18 |
H181 |
180.0 |
180.3 |
C18 |
C19 |
C14 |
H191 |
180.0 |
180.1 |
C19 |
C14 |
C13 |
H131 |
186.1 |
179.3 |
C09 |
C10 |
H101 |
C11 |
180.0 |
180.3 |
H101 |
C10 |
C11 |
C12 |
180.4 |
180.0 |
H101 |
C10 |
C11 |
H111 |
0.4 |
0.0 |
C12 |
C13 |
H131 |
C14 |
238.0 |
240.7 |
H131 |
C13 |
C14 |
C15 |
6.3 |
359.3 |
C20 |
C13 |
H131 |
C14 |
117.7 |
119.3 |
H131 |
C13 |
C14 |
C19 |
186.1 |
179.3 |
H131 |
C13 |
C20 |
H201 |
196.8 |
192.4 |
H131 |
C13 |
C20 |
H202 |
316.5 |
313.2 |
C14 |
C15 |
H151 |
C16 |
180.0 |
180.3 |
H151 |
C15 |
C16 |
C17 |
179.6 |
180.0 |
H151 |
C15 |
C16 |
H161 |
359.6 |
359.9 |
C16 |
C17 |
H171 |
C18 |
180.0 |
180.6 |
H171 |
C17 |
C18 |
C19 |
180.0 |
180.0 |
H171 |
C17 |
C18 |
H181 |
360.0 |
0.0 |
H201 |
C20 |
C13 |
C14 |
312.3 |
311.8 |
H201 |
C20 |
C13 |
H131 |
196.8 |
192.4 |
C13 |
C20 |
H201 |
H202 |
119.6 |
120.8 |
N05 |
C20 |
H201 |
H202 |
240.4 |
239.2 |
H202 |
C20 |
C13 |
C14 |
72.0 |
72.6 |
H202 |
C20 |
C13 |
H131 |
316.5 |
313.2 |
C13 |
C20 |
H202 |
H201 |
240.4 |
239.2 |
N05 |
C20 |
H202 |
H201 |
119.5 |
120.8 |
H031 |
C03 |
C02 |
N05 |
180.4 |
84.6 |
C02 |
C03 |
H031 |
H1 |
120.0 |
120.0 |
C02 |
C03 |
H031 |
H032 |
240.0 |
239.9 |
H1 |
C03 |
H031 |
H032 |
120.0 |
119.9 |
H1 |
C03 |
C02 |
N05 |
300.4 |
204.6 |
C02 |
C03 |
H1 |
H031 |
239.9 |
239.9 |
C02 |
C03 |
H1 |
H032 |
120.0 |
120.0 |
H031 |
C03 |
H1 |
H032 |
240.0 |
240.0 |
H032 |
C03 |
C02 |
N05 |
60.4 |
324.5 |
C02 |
C03 |
H032 |
H031 |
120.0 |
120.1 |
C02 |
C03 |
H032 |
H1 |
240.0 |
240.1 |
H031 |
C03 |
H032 |
H1 |
120.0 |
120.0 |
N05 |
C06 |
H061 |
H062 |
119.6 |
239.6 |
H061 |
C06 |
C07 |
C08 |
82.4 |
311.6 |
H061 |
C06 |
C07 |
C12 |
262.7 |
132.5 |
C07 |
C06 |
H061 |
H062 |
240.4 |
119.9 |
N05 |
C06 |
H062 |
H061 |
240.4 |
119.8 |
H062 |
C06 |
C07 |
C08 |
322.6 |
71.5 |
H062 |
C06 |
C07 |
C12 |
143.0 |
252.4 |
C07 |
C06 |
H062 |
H061 |
119.6 |
240.1 |
C07 |
C08 |
H081 |
C09 |
180.0 |
180.1 |
H081 |
C08 |
C07 |
C12 |
179.7 |
179.5 |
H081 |
C08 |
C09 |
H091 |
359.9 |
0.8 |
H091 |
C09 |
C08 |
H081 |
359.9 |
0.8 |
H091 |
C09 |
C10 |
C11 |
180.1 |
179.7 |
H091 |
C09 |
C10 |
H101 |
0.1 |
359.4 |
C10 |
C11 |
H111 |
C12 |
180.0 |
179.9 |
H111 |
C11 |
C10 |
H101 |
0.4 |
0.0 |
C15 |
C16 |
H161 |
C17 |
180.0 |
180.1 |
H161 |
C16 |
C15 |
H151 |
359.6 |
359.9 |
H161 |
C16 |
C17 |
C18 |
180.3 |
180.6 |
H161 |
C16 |
C17 |
H171 |
0.3 |
0.1 |
C17 |
C18 |
H181 |
C19 |
180.0 |
180.0 |
H181 |
C18 |
C17 |
H171 |
360.0 |
0.0 |
H181 |
C18 |
C19 |
H191 |
360.0 |
0.4 |
C14 |
C19 |
H191 |
C18 |
180.0 |
180.1 |
H191 |
C19 |
C18 |
H181 |
360.0 |
0.4 |