PDB Chemical Component T7Z

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for T7Z

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C01 N02 1.415 1.465
N02 C03 1.451 1.309
C03 N04 1.416 1.370
C03 S33 1.646 1.773
N04 C05 1.493 1.353
C05 C06 1.501 1.506
C05 C07 1.442 1.342
C07 C08 1.516 1.472
C07 S33 1.608 1.773
C08 N09 1.362 1.333
C08 C30 1.381 1.415
N09 C10 1.360 1.324
C10 N11 1.446 1.382
C10 N28 1.347 1.327
N11 C12 1.466 1.398
C12 C13 1.386 1.388
C12 C27 1.410 1.389
C13 C14 1.417 1.381
C14 S15 1.807 1.762
C14 C24 1.410 1.383
S15 N16 1.638 1.656
S15 O22 1.428 1.421
S15 O23 1.443 1.422
N16 C17 1.355 1.471
N16 C21 1.356 1.471
C17 C18 1.510 1.533
C18 O19 1.464 1.430
O19 C20 1.477 1.430
C20 C21 1.501 1.529
C24 C25 1.487 1.507
C24 C26 1.386 1.382
C26 C27 1.421 1.381
N28 C29 1.360 1.320
C29 C30 1.424 1.399
C30 C31 1.484 1.433
C31 N32 1.168 1.136
C01 H011 1.100 1.090
C01 H012 1.100 1.090
C01 H013 1.099 1.090
N04 H04 0.999 0.970
C06 H061 1.100 1.090
C06 H062 1.100 1.090
C06 H063 1.100 1.090
N11 H11 1.000 0.970
C13 H13 1.080 1.081
C27 H27 1.080 1.080
C17 H171 1.100 1.091
C17 H172 1.100 1.091
C21 H211 1.100 1.090
C21 H212 1.100 1.090
C18 H181 1.099 1.090
C18 H182 1.100 1.091
C20 H201 1.100 1.090
C20 H202 1.100 1.090
C25 H251 1.100 1.089
C25 H252 1.100 1.091
C25 H253 1.100 1.090
C26 H26 1.080 1.080
C29 H29 1.080 1.080

Bond Angles for T7Z

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C01 N02 C03 120.9 120.0
N02 C01 H011 109.5 109.4
N02 C01 H012 109.5 109.4
N02 C01 H013 109.5 109.5
N02 C03 N04 125.8 127.5
N02 C03 S33 124.0 127.5
N04 C03 S33 110.2 105.0
C03 N04 C05 109.7 117.0
C03 N04 H04 125.1 121.5
C03 S33 C07 99.7 94.5
N04 C05 C06 122.3 121.0
N04 C05 C07 110.9 118.0
C05 N04 H04 125.1 121.5
C06 C05 C07 126.8 121.1
C05 C06 H061 109.5 109.5
C05 C06 H062 109.5 109.5
C05 C06 H063 109.4 109.5
C05 C07 C08 124.8 127.2
C05 C07 S33 109.5 105.6
C08 C07 S33 125.7 127.2
C07 C08 N09 119.8 120.6
C07 C08 C30 118.9 120.7
N09 C08 C30 121.3 118.7
C08 N09 C10 120.3 120.7
C08 C30 C29 116.8 118.1
C08 C30 C31 120.1 120.9
N09 C10 N11 120.3 118.9
N09 C10 N28 120.8 122.1
N11 C10 N28 118.9 119.0
C10 N11 C12 125.1 120.0
C10 N11 H11 117.5 120.0
C10 N28 C29 120.4 121.3
N11 C12 C13 119.8 120.1
N11 C12 C27 121.3 120.1
C12 N11 H11 117.5 120.0
C13 C12 C27 118.9 119.8
C12 C13 C14 120.2 120.0
C12 C13 H13 119.9 120.0
C12 C27 C26 121.5 119.9
C12 C27 H27 119.3 120.0
C13 C14 S15 118.6 120.0
C13 C14 C24 120.3 120.0
C14 C13 H13 119.9 120.0
S15 C14 C24 121.0 119.9
C14 S15 N16 106.3 107.2
C14 S15 O22 109.9 106.4
C14 S15 O23 112.6 106.4
C14 C24 C25 121.5 119.9
C14 C24 C26 120.1 120.2
N16 S15 O22 108.4 106.4
N16 S15 O23 111.4 106.4
S15 N16 C17 110.7 121.0
S15 N16 C21 122.0 121.0
O22 S15 O23 108.1 123.1
C17 N16 C21 123.6 118.0
N16 C17 C18 110.8 108.4
N16 C17 H171 109.1 109.7
N16 C17 H172 109.1 109.7
N16 C21 C20 110.9 108.6
N16 C21 H211 109.1 109.7
N16 C21 H212 109.1 109.7
C17 C18 O19 112.5 109.2
C18 C17 H171 109.1 109.7
C18 C17 H172 109.2 109.6
C17 C18 H181 108.7 109.5
C17 C18 H182 108.7 109.5
C18 O19 C20 111.1 114.1
O19 C18 H181 108.7 109.5
O19 C18 H182 108.7 109.5
O19 C20 C21 115.6 109.3
O19 C20 H201 107.9 109.5
O19 C20 H202 107.9 109.5
C20 C21 H211 109.1 109.6
C20 C21 H212 109.1 109.5
C21 C20 H201 107.9 109.6
C21 C20 H202 107.9 109.4
C25 C24 C26 118.4 119.9
C24 C25 H251 109.5 109.5
C24 C25 H252 109.4 109.4
C24 C25 H253 109.5 109.5
C24 C26 C27 118.9 120.0
C24 C26 H26 120.5 120.0
C26 C27 H27 119.2 120.0
C27 C26 H26 120.5 120.0
N28 C29 C30 120.4 119.1
N28 C29 H29 119.8 120.5
C29 C30 C31 123.1 120.9
C30 C29 H29 119.8 120.4
C30 C31 N32 179.6 179.9
H011 C01 H012 109.4 109.4
H011 C01 H013 109.5 109.5
H012 C01 H013 109.5 109.5
H061 C06 H062 109.4 109.4
H061 C06 H063 109.5 109.5
H062 C06 H063 109.4 109.4
H171 C17 H172 109.5 109.7
H211 C21 H212 109.5 109.7
H181 C18 H182 109.4 109.6
H201 C20 H202 109.5 109.6
H251 C25 H252 109.5 109.5
H251 C25 H253 109.5 109.5
H252 C25 H253 109.5 109.5

Torsion Angles for T7Z

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C01 N02 C03 N04 297.7 0.0
C01 N02 C03 S33 119.0 179.7
H011 C01 N02 H012 240.0 240.1
H011 C01 N02 H013 120.0 120.0
H012 C01 N02 H013 240.0 240.0
C03 N02 C01 H011 180.0 180.0
C03 N02 C01 H012 300.0 299.9
C03 N02 C01 H013 60.0 60.0
N04 C03 N02 S33 178.8 180.3
N02 C03 N04 C05 180.7 180.0
N02 C03 N04 H04 0.7 359.9
N02 C03 S33 C07 179.3 179.9
N02 C03 N04 S33 181.1 179.7
N04 C03 S33 C07 0.3 359.7
C03 N04 C05 C06 181.4 180.0
C03 N04 C05 C07 0.3 360.0
C05 N04 C03 H04 180.0 180.0
N02 C03 S33 N04 178.9 180.3
S33 C03 N04 C05 359.6 0.3
S33 C03 N04 H04 179.6 180.2
C05 C07 S33 C03 359.8 0.3
C08 C07 S33 C03 181.5 180.1
C05 N04 C03 S33 359.6 0.3
C03 N04 C05 H04 180.0 180.0
C06 C05 N04 C07 181.1 180.0
N04 C05 C06 H061 180.0 360.0
N04 C05 C06 H062 300.0 120.0
N04 C05 C06 H063 60.0 239.9
N04 C05 C07 C08 178.3 180.0
N04 C05 C07 S33 360.0 359.8
N04 C05 C06 C07 178.7 180.0
C06 C05 N04 H04 1.4 0.1
C06 C05 C07 C08 357.1 360.0
C06 C05 C07 S33 178.8 179.7
H061 C06 C05 H062 240.0 240.0
H061 C06 C05 H063 120.1 120.1
H062 C06 C05 H063 240.0 240.0
C03 S33 C07 C05 359.8 0.3
N04 C05 C07 C06 181.2 180.0
C07 C05 N04 H04 180.2 180.0
C07 C05 C06 H061 1.3 180.0
C07 C05 C06 H062 121.3 300.0
C07 C05 C06 H063 241.3 60.0
C08 C07 C05 S33 178.3 180.3
C05 C07 C08 N09 227.9 0.0
C05 C07 C08 C30 45.9 179.7
C03 S33 C07 C08 181.5 180.1
C05 C07 C08 S33 182.0 179.7
N09 C08 C07 C30 181.9 180.3
C07 C08 N09 C10 179.7 180.0
C07 C08 C30 C29 181.3 179.7
C07 C08 C30 C31 3.3 0.0
C05 C07 S33 C08 178.3 180.3
S33 C07 C08 N09 45.9 180.3
S33 C07 C08 C30 224.0 0.0
N09 C08 C07 S33 45.9 180.3
C07 C08 N09 C30 178.0 179.7
N09 C08 C30 C29 359.3 359.4
N09 C08 C30 C31 181.4 179.8
C08 N09 C10 N11 178.1 180.0
C08 N09 C10 N28 357.7 360.0
C30 C08 C07 S33 224.0 0.0
C07 C08 C30 N09 182.0 180.3
C30 C08 N09 C10 1.7 0.3
N28 C29 C30 C08 0.3 0.5
C29 C30 C08 C31 178.0 179.7
C08 C30 C29 H29 180.3 180.3
C08 C30 C31 N32 312.4 309.6
C10 N09 C08 C30 1.7 0.3
N11 C10 N09 N28 180.3 180.1
N09 C10 N11 C12 342.5 174.4
N09 C10 N11 H11 162.5 354.5
N09 C10 N28 C29 1.9 0.0
N09 C10 N11 N28 179.7 179.9
N11 C10 N28 C29 181.6 180.0
C10 N11 C12 C13 16.7 146.2
C10 N11 C12 C27 193.9 326.0
C12 N11 C10 H11 180.0 179.9
N09 C10 N28 N11 180.3 180.1
N28 C10 N11 C12 162.9 354.5
N28 C10 N11 H11 342.8 174.5
C10 N28 C29 C30 359.1 359.7
C10 N28 C29 H29 179.1 180.0
C12 N11 C10 N28 162.9 354.5
C10 N11 C12 H11 180.0 180.1
C13 C12 N11 C27 182.8 180.2
N11 C12 C13 C14 178.3 180.0
N11 C12 C13 H13 358.3 0.1
N11 C12 C27 C26 181.3 179.7
N11 C12 C27 H27 1.3 359.9
N11 C12 C13 C27 177.3 179.8
C13 C12 N11 H11 196.7 326.2
C13 C12 C27 C26 358.6 359.5
C13 C12 C27 H27 178.6 179.7
C12 C13 C14 S15 179.4 180.0
C12 C13 C14 C24 0.3 0.0
C14 C13 C12 H13 180.0 180.0
N11 C12 C27 C13 182.8 180.2
C27 C12 N11 H11 14.0 146.0
C27 C12 C13 C14 1.1 0.2
C27 C12 C13 H13 181.1 180.3
C24 C26 C27 C12 0.4 0.5
C26 C27 C12 H27 180.0 179.8
C12 C27 C26 H26 180.5 180.2
C14 C13 C12 C27 1.1 0.2
C12 C13 C14 H13 180.0 180.0
S15 C14 C13 C24 179.1 180.0
C13 C14 S15 N16 206.3 115.0
C13 C14 S15 O22 323.5 228.6
C13 C14 S15 O23 84.1 1.5
C13 C14 C24 C25 179.8 180.0
C13 C14 C24 C26 358.7 0.0
C13 C14 S15 C24 180.9 180.0
S15 C14 C13 H13 359.4 360.0
S15 C14 C24 C25 0.7 0.0
S15 C14 C24 C26 179.5 180.0
N16 S15 C14 O22 242.9 246.4
N16 S15 C14 O23 122.2 113.5
C14 S15 N16 C17 111.5 90.0
C14 S15 N16 C21 270.6 269.7
O22 S15 C14 O23 239.4 227.1
C13 C14 C24 S15 179.1 180.0
C24 C14 C13 H13 180.3 180.0
C24 C14 S15 N16 25.5 295.0
C24 C14 S15 O22 142.6 48.6
C24 C14 S15 O23 263.2 181.5
C25 C24 C14 C26 181.2 180.0
C14 C24 C25 H251 89.4 90.0
C14 C24 C25 H252 209.4 210.0
C14 C24 C25 H253 329.4 330.0
C14 C24 C26 C27 1.0 359.7
C14 C24 C26 H26 180.9 180.0
N16 S15 C14 C24 25.5 295.0
C14 S15 N16 O22 118.2 113.6
C14 S15 N16 O23 237.0 246.5
O22 S15 N16 O23 118.9 132.9
C17 N16 S15 C21 200.9 180.3
S15 N16 C17 C18 109.7 129.4
S15 N16 C17 H171 229.9 249.2
S15 N16 C17 H172 349.5 9.7
S15 N16 C21 C20 247.9 230.5
S15 N16 C21 H211 8.1 350.3
S15 N16 C21 H212 127.7 110.8
O22 S15 C14 C24 142.6 48.6
C14 S15 O22 N16 244.2 245.9
C14 S15 O22 O23 123.3 122.9
N16 S15 O22 O23 239.1 237.1
O22 S15 N16 C17 353.4 336.4
O22 S15 N16 C21 152.5 156.2
O23 S15 C14 C24 263.2 181.5
C14 S15 O23 N16 119.3 114.1
C14 S15 O23 O22 238.3 237.0
N16 S15 O23 O22 119.0 122.9
O23 S15 N16 C17 234.5 203.6
O23 S15 N16 C21 33.6 23.3
C17 N16 S15 O22 353.4 336.4
C17 N16 S15 O23 234.5 203.6
S15 N16 C17 C21 158.7 179.7
C17 N16 C21 C20 44.3 50.2
C17 N16 C21 H211 164.5 170.0
C17 N16 C21 H212 284.1 290.6
N16 C17 C18 O19 48.9 52.3
C18 C17 N16 H171 239.8 240.2
C18 C17 N16 H172 120.2 119.7
N16 C17 C18 H181 169.3 172.2
N16 C17 C18 H182 288.4 292.4
H171 C17 N16 H172 240.4 239.5
C21 N16 S15 O22 152.5 156.2
C21 N16 S15 O23 33.6 23.3
S15 N16 C21 C17 203.6 180.3
C21 N16 C17 C18 311.0 309.7
C21 N16 C17 H171 71.2 69.5
C21 N16 C17 H172 190.8 190.0
O19 C20 C21 N16 319.5 307.9
C20 C21 N16 H211 239.8 240.2
C20 C21 N16 H212 120.2 119.7
N16 C21 C20 H201 198.6 187.9
N16 C21 C20 H202 80.4 67.8
H211 C21 N16 H212 240.4 239.4
C18 C17 N16 C21 311.0 309.7
N16 C17 C18 H171 120.2 119.8
N16 C17 C18 H172 239.8 240.2
C17 C18 O19 C20 310.8 297.4
O19 C18 C17 H181 239.6 240.1
O19 C18 C17 H182 120.5 119.9
H171 C17 C18 H172 119.6 120.5
H181 C18 C17 H182 240.9 239.8
O19 C18 C17 H171 288.7 292.5
O19 C18 C17 H172 169.1 172.0
C17 C18 O19 H181 120.4 119.9
C17 C18 O19 H182 239.5 240.1
C18 O19 C20 C21 45.9 62.5
C18 O19 C20 H201 166.7 182.5
C18 O19 C20 H202 285.0 302.7
H181 C18 O19 H182 119.1 120.2
N16 C21 C20 O19 319.5 307.9
C20 O19 C18 H181 190.4 177.5
C20 O19 C18 H182 71.3 57.3
O19 C20 C21 H211 199.3 188.0
O19 C20 C21 H212 79.7 67.7
C21 C20 O19 H201 239.1 240.0
C21 C20 O19 H202 120.9 119.8
H201 C20 O19 H202 241.8 239.8
N16 C21 C20 H211 120.2 119.9
N16 C21 C20 H212 239.8 240.2
O19 C20 C21 H201 120.9 120.0
O19 C20 C21 H202 239.1 240.1
H211 C21 C20 H212 119.6 120.4
H201 C20 C21 H202 118.2 120.1
C14 C24 C25 C26 178.8 180.0
C25 C24 C26 C27 179.8 179.7
C25 C24 C26 H26 359.8 0.0
H251 C25 C24 H252 240.0 240.0
H251 C25 C24 H253 120.0 120.1
H252 C25 C24 H253 240.0 240.0
C12 C27 C26 C24 0.4 0.5
C14 C24 C26 C25 181.2 180.0
C26 C24 C25 H251 270.6 270.0
C26 C24 C25 H252 30.6 30.0
C26 C24 C25 H253 150.6 150.0
C24 C26 C27 H27 180.4 180.3
C27 C26 C24 H26 180.0 179.7
C12 C27 C26 H27 180.0 180.2
C24 C26 C27 H26 180.0 180.3
C08 C30 C29 N28 0.3 0.5
N28 C29 C30 C31 178.2 180.2
C30 C29 N28 H29 180.0 179.7
C08 C30 C29 C31 182.1 180.3
N28 C29 C30 H29 180.0 180.3
C29 C30 C31 N32 134.6 129.9
C08 C30 C31 C29 177.8 179.7
C31 C30 C29 H29 358.2 360.0
H011 C01 N02 C03 180.0 180.0
N02 C01 H011 H012 120.0 119.9
N02 C01 H011 H013 240.0 240.0
H012 C01 H011 H013 120.0 120.0
H012 C01 N02 C03 300.0 299.9
N02 C01 H012 H011 240.0 240.1
N02 C01 H012 H013 120.0 120.1
H011 C01 H012 H013 240.0 240.0
H013 C01 N02 C03 60.0 60.0
N02 C01 H013 H011 120.0 120.0
N02 C01 H013 H012 240.0 240.0
H011 C01 H013 H012 120.0 120.0
H04 N04 C03 S33 179.6 180.2
C03 N04 H04 C05 180.0 180.0
H04 N04 C05 C06 1.4 0.1
H04 N04 C05 C07 180.2 180.0
H061 C06 C05 C07 1.3 180.0
C05 C06 H061 H062 120.0 120.0
C05 C06 H061 H063 240.0 239.9
H062 C06 H061 H063 120.0 119.9
H062 C06 C05 C07 121.3 300.0
C05 C06 H062 H061 240.0 239.9
C05 C06 H062 H063 120.0 120.0
H061 C06 H062 H063 240.0 240.1
H063 C06 C05 C07 241.3 60.0
C05 C06 H063 H061 120.0 120.1
C05 C06 H063 H062 240.0 240.0
H061 C06 H063 H062 120.0 119.9
H11 N11 C10 N28 342.8 174.5
C10 N11 H11 C12 180.0 179.9
H11 N11 C12 C13 196.7 326.2
H11 N11 C12 C27 14.0 146.0
H13 C13 C12 C27 181.1 180.3
C12 C13 H13 C14 180.0 180.0
H13 C13 C14 S15 359.4 360.0
H13 C13 C14 C24 180.3 180.0
C12 C27 H27 C26 180.0 179.8
H27 C27 C26 H26 0.4 0.0
H171 C17 N16 C21 71.2 69.5
N16 C17 H171 C18 238.8 241.0
N16 C17 H171 H172 119.4 120.6
H171 C17 C18 O19 288.7 292.5
C18 C17 H171 H172 240.6 239.6
H171 C17 C18 H181 49.2 52.4
H171 C17 C18 H182 168.2 172.6
H172 C17 N16 C21 190.8 190.0
N16 C17 H172 C18 121.2 119.0
N16 C17 H172 H171 240.6 239.4
H172 C17 C18 O19 169.1 172.0
C18 C17 H172 H171 119.4 120.5
H172 C17 C18 H181 289.6 292.0
H172 C17 C18 H182 48.6 52.2
N16 C21 H211 C20 238.7 240.8
N16 C21 H211 H212 119.4 120.5
C20 C21 H211 H212 240.7 239.7
H211 C21 C20 H201 78.4 68.1
H211 C21 C20 H202 320.2 308.0
N16 C21 H212 C20 121.3 119.1
N16 C21 H212 H211 240.6 239.4
C20 C21 H212 H211 119.4 120.3
H212 C21 C20 H201 318.8 307.7
H212 C21 C20 H202 200.6 187.6
C17 C18 H181 O19 237.2 240.3
H181 C18 C17 H171 49.2 52.4
H181 C18 C17 H172 289.6 292.0
C17 C18 H181 H182 118.6 120.2
H181 C18 O19 C20 190.4 177.5
O19 C18 H181 H182 241.4 239.9
C17 C18 H182 O19 122.8 119.7
H182 C18 C17 H171 168.2 172.6
H182 C18 C17 H172 48.6 52.2
C17 C18 H182 H181 241.4 239.8
H182 C18 O19 C20 71.3 57.3
O19 C18 H182 H181 118.6 120.1
O19 C20 H201 C21 234.4 240.1
O19 C20 H201 H202 117.2 120.1
H201 C20 C21 H211 78.4 68.1
H201 C20 C21 H212 318.8 307.7
C21 C20 H201 H202 242.8 240.0
O19 C20 H202 C21 125.6 119.8
O19 C20 H202 H201 242.8 239.9
H202 C20 C21 H211 320.2 308.0
H202 C20 C21 H212 200.6 187.6
C21 C20 H202 H201 117.2 120.1
H251 C25 C24 C26 270.6 270.0
C24 C25 H251 H252 120.0 120.0
C24 C25 H251 H253 240.0 240.0
H252 C25 H251 H253 120.0 120.0
H252 C25 C24 C26 30.6 30.0
C24 C25 H252 H251 240.0 240.0
C24 C25 H252 H253 120.0 120.0
H251 C25 H252 H253 240.0 240.0
H253 C25 C24 C26 150.6 150.0
C24 C25 H253 H251 120.0 120.0
C24 C25 H253 H252 240.0 240.0
H251 C25 H253 H252 120.0 120.0
C24 C26 H26 C27 180.0 179.7
H26 C26 C27 H27 0.4 0.0
N28 C29 H29 C30 180.0 179.7
H29 C29 C30 C31 358.2 360.0