PDB Chemical Component T7A
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for T7A
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O |
C |
1.427 |
1.429 |
| C1 |
O |
1.360 |
1.359 |
| C1 |
C2 |
1.393 |
1.376 |
| C3 |
C2 |
1.397 |
1.387 |
| C4 |
C3 |
1.378 |
1.377 |
| C5 |
C4 |
1.390 |
1.394 |
| S |
C5 |
1.744 |
1.762 |
| C6 |
S |
1.748 |
1.758 |
| N |
C6 |
1.380 |
1.386 |
| C7 |
N |
1.369 |
1.347 |
| O1 |
C7 |
1.220 |
1.213 |
| C7 |
C8 |
1.510 |
1.507 |
| C6 |
N1 |
1.303 |
1.288 |
| N1 |
C9 |
1.385 |
1.348 |
| C9 |
C1 |
1.393 |
1.416 |
| C9 |
C5 |
1.403 |
1.397 |
| C4 |
H5 |
1.080 |
1.081 |
| C8 |
H9 |
1.100 |
1.090 |
| C8 |
H7 |
1.100 |
1.090 |
| C8 |
H8 |
1.099 |
1.090 |
| N |
H6 |
1.000 |
0.970 |
| C |
H1 |
1.100 |
1.091 |
| C |
H2 |
1.100 |
1.090 |
| C |
H |
1.100 |
1.090 |
| C2 |
H3 |
1.080 |
1.080 |
| C3 |
H4 |
1.080 |
1.079 |
Bond Angles for T7A
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O |
C |
H1 |
109.5 |
109.5 |
| O |
C |
H2 |
109.5 |
109.5 |
| O |
C |
H |
109.5 |
109.5 |
| C1 |
C2 |
H3 |
120.0 |
119.8 |
| C4 |
C3 |
C2 |
121.3 |
120.0 |
| C3 |
C2 |
H3 |
120.0 |
119.7 |
| C5 |
C4 |
C3 |
118.0 |
120.3 |
| C3 |
C4 |
H5 |
121.0 |
119.8 |
| C4 |
C3 |
H4 |
119.4 |
120.0 |
| C5 |
C4 |
H5 |
121.0 |
119.8 |
| N |
C6 |
S |
122.7 |
124.8 |
| C8 |
C7 |
N |
115.2 |
120.0 |
| C7 |
N |
H6 |
117.2 |
120.0 |
| C7 |
C8 |
H9 |
109.5 |
109.5 |
| C7 |
C8 |
H7 |
109.5 |
109.5 |
| C7 |
C8 |
H8 |
109.5 |
109.5 |
| C6 |
N1 |
C9 |
109.4 |
117.9 |
| N1 |
C9 |
C1 |
125.8 |
128.7 |
| N1 |
C9 |
C5 |
115.7 |
112.9 |
| H9 |
C8 |
H7 |
109.4 |
109.4 |
| H9 |
C8 |
H8 |
109.5 |
109.5 |
| H7 |
C8 |
H8 |
109.5 |
109.5 |
| H1 |
C |
H2 |
109.5 |
109.5 |
| H1 |
C |
H |
109.5 |
109.4 |
| H2 |
C |
H |
109.5 |
109.5 |
Torsion Angles for T7A
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H1 |
C |
O |
H2 |
240.0 |
240.0 |
| H1 |
C |
O |
H |
120.0 |
119.9 |
| H2 |
C |
O |
H |
240.0 |
240.0 |
| C1 |
O |
C |
H1 |
180.0 |
180.0 |
| C1 |
O |
C |
H2 |
300.0 |
300.0 |
| C1 |
O |
C |
H |
60.0 |
60.1 |
| N1 |
C9 |
C1 |
O |
359.7 |
-0.0 |
| C4 |
C3 |
C2 |
C1 |
0.1 |
-0.0 |
| C3 |
C2 |
C1 |
H3 |
180.0 |
180.1 |
| N1 |
C9 |
C1 |
C2 |
180.1 |
180.0 |
| C1 |
C2 |
C3 |
H3 |
180.0 |
179.9 |
| C5 |
C4 |
C3 |
C2 |
0.1 |
-0.0 |
| C2 |
C3 |
C4 |
H5 |
180.1 |
180.0 |
| C4 |
C3 |
C2 |
H4 |
180.0 |
179.9 |
| C4 |
C3 |
C2 |
H3 |
180.1 |
180.1 |
| C5 |
C4 |
C3 |
H5 |
180.0 |
180.0 |
| C3 |
C4 |
C5 |
H5 |
180.0 |
180.0 |
| C5 |
C4 |
C3 |
H4 |
180.1 |
179.9 |
| N1 |
C9 |
C5 |
C4 |
180.1 |
180.0 |
| S |
C5 |
C4 |
H5 |
360.0 |
360.0 |
| S |
C6 |
N1 |
C9 |
352.3 |
360.0 |
| N |
C6 |
N1 |
C9 |
172.3 |
180.0 |
| C7 |
N |
C6 |
S |
3.6 |
-0.0 |
| N |
C7 |
C8 |
H9 |
179.9 |
90.1 |
| N |
C7 |
C8 |
H7 |
299.9 |
210.0 |
| N |
C7 |
C8 |
H8 |
59.9 |
330.0 |
| O1 |
C7 |
N |
H6 |
179.9 |
180.0 |
| O1 |
C7 |
C8 |
H9 |
0.0 |
270.0 |
| O1 |
C7 |
C8 |
H7 |
120.0 |
29.9 |
| O1 |
C7 |
C8 |
H8 |
240.0 |
150.0 |
| C8 |
C7 |
N |
H6 |
0.0 |
359.9 |
| H9 |
C8 |
C7 |
H7 |
240.0 |
240.0 |
| H9 |
C8 |
C7 |
H8 |
120.0 |
120.0 |
| H7 |
C8 |
C7 |
H8 |
240.0 |
240.0 |
| C6 |
N1 |
C9 |
C1 |
184.9 |
180.0 |
| C6 |
N1 |
C9 |
C5 |
4.8 |
360.0 |
| C9 |
C1 |
C2 |
H3 |
179.8 |
179.9 |
| N1 |
C9 |
C1 |
C5 |
179.8 |
180.0 |
| C9 |
C5 |
C4 |
H5 |
179.9 |
180.0 |
| N1 |
C9 |
C5 |
C1 |
180.1 |
180.0 |
| H5 |
C4 |
C3 |
C2 |
180.1 |
180.0 |
| C5 |
C4 |
H5 |
C3 |
180.0 |
180.0 |
| H5 |
C4 |
C3 |
H4 |
0.1 |
359.9 |
| H9 |
C8 |
C7 |
N |
179.9 |
90.1 |
| C7 |
C8 |
H9 |
H7 |
120.0 |
120.0 |
| C7 |
C8 |
H9 |
H8 |
240.0 |
240.0 |
| H7 |
C8 |
H9 |
H8 |
120.0 |
120.0 |
| H7 |
C8 |
C7 |
N |
299.9 |
210.0 |
| C7 |
C8 |
H7 |
H9 |
240.0 |
240.0 |
| C7 |
C8 |
H7 |
H8 |
120.0 |
120.1 |
| H9 |
C8 |
H7 |
H8 |
240.0 |
240.0 |
| H8 |
C8 |
C7 |
N |
59.9 |
330.0 |
| C7 |
C8 |
H8 |
H9 |
120.0 |
120.0 |
| C7 |
C8 |
H8 |
H7 |
240.0 |
239.9 |
| H9 |
C8 |
H8 |
H7 |
120.0 |
119.9 |
| H6 |
N |
C6 |
S |
183.7 |
180.1 |
| O |
C |
H1 |
H2 |
120.0 |
120.1 |
| O |
C |
H1 |
H |
240.0 |
240.0 |
| H2 |
C |
H1 |
H |
120.0 |
120.0 |
| O |
C |
H2 |
H1 |
240.0 |
240.0 |
| O |
C |
H2 |
H |
120.0 |
120.0 |
| H1 |
C |
H2 |
H |
240.0 |
240.1 |
| O |
C |
H |
H1 |
120.0 |
120.0 |
| O |
C |
H |
H2 |
240.0 |
239.9 |
| H1 |
C |
H |
H2 |
120.0 |
120.0 |
| C4 |
C3 |
H4 |
C2 |
180.0 |
180.1 |
| H4 |
C3 |
C2 |
H3 |
0.1 |
0.1 |
| H4 |
C3 |
C4 |
H5 |
0.1 |
359.9 |