PDB Chemical Component T6M

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for T6M

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C	1.504	1.507
C1	O	1.223	1.212
N	C1	1.347	1.348
C2	N	1.464	1.470
C3	C2	1.506	1.533
N1	C3	1.472	1.469
N1	C4	1.467	1.470
C4	C5	1.501	1.534
C5	N	1.464	1.469
S	N1	1.635	1.655
S	O1	1.428	1.421
S	O2	1.428	1.421
C6	S	1.764	1.762
C7	C6	1.379	1.382
C8	C7	1.382	1.382
C9	C8	1.376	1.383
CL1	C9	1.739	1.736
C9	C10	1.375	1.384
C10	C11	1.382	1.382
C11	C6	1.379	1.382
C4	H7	1.100	1.090
C4	H6	1.100	1.090
C5	H9	1.100	1.089
C5	H8	1.100	1.090
C7	H10	1.080	1.080
C8	H11	1.080	1.080
C10	H12	1.080	1.080
C	H	1.100	1.090
C	H14	1.100	1.089
C	H1	1.100	1.090
C11	H13	1.080	1.080
C2	H3	1.100	1.091
C2	H2	1.100	1.090
C3	H5	1.100	1.090
C3	H4	1.100	1.090

Bond Angles for T6M

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N	C1	C	116.9	120.0
C1	C	H	109.5	109.4
C1	C	H14	109.5	109.5
C1	C	H1	109.5	109.5
N	C1	O	122.6	120.0
C5	N	C1	123.1	120.6
N1	C3	C2	108.2	108.7
C3	C2	H3	109.3	109.6
C3	C2	H2	109.2	109.8
C4	N1	C3	111.1	118.8
N1	C3	H5	109.8	109.6
N1	C3	H4	109.8	109.6
N1	C4	C5	107.6	108.6
N1	C4	H7	110.0	109.6
N1	C4	H6	109.9	109.6
C4	C5	N	110.1	108.6
C5	C4	H7	110.0	109.6
C5	C4	H6	109.9	109.6
C4	C5	H9	109.3	109.6
C4	C5	H8	109.3	109.5
N	C5	H9	109.3	109.7
N	C5	H8	109.3	109.6
C6	S	O1	108.9	106.4
C6	S	O2	108.0	106.4
C7	C6	S	119.7	120.0
C11	C6	S	119.4	120.0
C8	C7	H10	120.2	120.0
C9	C8	H11	120.4	120.0
C9	C10	H12	120.4	120.0
C11	C10	H12	120.4	120.0
C10	C11	H13	120.2	119.9
H7	C4	H6	109.5	109.8
H9	C5	H8	109.5	109.8
H	C	H14	109.4	109.5
H	C	H1	109.5	109.4
H14	C	H1	109.5	109.4
H3	C2	H2	109.4	109.6
H5	C3	H4	109.5	109.7

Torsion Angles for T6M

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N	C1	C	O	180.5	180.1
C5	N	C1	C	12.2	180.0
H	C	C1	H14	240.0	239.9
H	C	C1	H1	120.0	119.9
H14	C	C1	H1	240.0	240.0
N	C1	O	C	179.5	179.9
O	C1	C	H	0.0	239.9
O	C1	C	H14	120.0	359.9
O	C1	C	H1	240.0	119.9
C5	N	C1	O	192.6	0.1
N	C1	C	H	180.5	60.0
N	C1	C	H14	300.5	180.1
N	C1	C	H1	60.5	300.0
C4	C5	N	C1	124.1	235.2
C1	N	C5	H9	4.0	115.5
C1	N	C5	H8	244.2	354.9
N1	C3	C2	N	304.2	49.4
C2	N	C5	H9	184.3	295.5
C2	N	C5	H8	64.5	174.9
C4	N1	C3	C2	62.2	304.8
N1	C3	C2	H5	240.2	119.8
N1	C3	C2	H4	119.8	240.2
H3	C2	C3	H2	119.7	120.5
N1	C3	C2	H3	184.0	289.7
N1	C3	C2	H2	64.4	169.3
C3	N1	C4	C5	296.6	55.2
C3	N1	C4	H7	56.4	175.0
C3	N1	C4	H6	177.0	295.5
H5	C3	N1	H4	120.4	239.5
C4	N1	C3	H5	302.4	64.6
C4	N1	C3	H4	182.1	185.0
N1	C4	C5	N	58.2	310.5
C5	C4	N1	H7	240.3	240.2
C5	C4	N1	H6	119.7	119.7
N1	C4	C5	H9	178.4	70.4
N1	C4	C5	H8	298.1	190.9
H7	C4	N1	H6	239.4	239.5
C5	C4	N1	C3	296.6	55.2
N1	C4	C5	H7	119.7	119.8
N1	C4	C5	H6	240.3	240.3
N	C5	C4	H9	239.9	240.2
N	C5	C4	H8	120.1	119.7
H7	C4	C5	H6	120.6	120.5
H9	C5	C4	H8	240.2	239.5
N	C5	C4	H7	298.5	190.8
N	C5	C4	H6	177.9	70.2
C4	C5	N	H9	120.1	119.8
C4	C5	N	H8	239.9	240.4
H9	C5	N	H8	119.8	120.6
S	N1	C3	H5	80.6	244.8
S	N1	C3	H4	320.2	5.3
S	N1	C4	H7	278.0	354.7
S	N1	C4	H6	38.6	115.2
C6	S	O1	O2	125.3	237.1
C7	C6	S	O1	26.4	336.4
C11	C6	S	O1	204.6	156.2
C6	S	O2	O1	234.3	122.9
C7	C6	S	O2	158.6	203.5
C11	C6	S	O2	336.7	23.3
C11	C6	C7	S	181.9	180.2
C8	C7	C6	S	179.1	180.0
C9	C8	C7	H10	179.5	179.9
CL1	C9	C8	H11	360.0	0.0
CL1	C9	C10	H12	360.0	360.0
C10	C9	C8	H11	180.1	179.8
C11	C10	C9	H12	180.0	180.1
C9	C10	C11	H13	180.7	180.0
C10	C11	C6	S	180.8	180.0
C9	C10	C11	H12	180.0	179.9
C7	C6	C11	S	178.2	179.8
H7	C4	N1	C3	56.4	175.0
N1	C4	H7	C5	241.7	240.8
N1	C4	H7	H6	120.9	120.4
H7	C4	C5	N	298.5	190.8
C5	C4	H7	H6	239.1	239.5
H7	C4	C5	H9	58.6	310.6
H7	C4	C5	H8	178.4	71.1
H6	C4	N1	C3	177.0	295.5
N1	C4	H6	C5	118.2	119.1
N1	C4	H6	H7	239.1	239.6
H6	C4	C5	N	177.9	70.2
C5	C4	H6	H7	120.9	120.5
H6	C4	C5	H9	298.0	190.1
H6	C4	C5	H8	57.8	310.6
H9	C5	N	C1	4.0	115.5
C4	C5	H9	N	239.4	240.8
H9	C5	C4	H7	58.6	310.6
H9	C5	C4	H6	298.0	190.1
C4	C5	H9	H8	119.7	120.3
N	C5	H9	H8	240.3	239.5
H8	C5	N	C1	244.2	354.9
C4	C5	H8	N	120.6	119.1
H8	C5	C4	H7	178.4	71.1
H8	C5	C4	H6	57.8	310.6
C4	C5	H8	H9	240.3	239.6
N	C5	H8	H9	119.7	120.5
H10	C7	C6	S	359.2	0.1
H11	C8	C7	H10	359.5	359.9
H12	C10	C11	H13	0.7	0.1
C1	C	H	H14	120.0	120.0
C1	C	H	H1	240.0	240.0
H14	C	H	H1	120.0	120.0
C1	C	H14	H	240.0	240.0
C1	C	H14	H1	120.0	120.0
H	C	H14	H1	240.0	240.0
C1	C	H1	H	120.0	119.9
C1	C	H1	H14	240.0	240.0
H	C	H1	H14	120.0	120.0
H13	C11	C6	S	0.8	360.0
H13	C11	C10	H12	0.7	0.1
C3	C2	H3	H2	240.4	239.4
C3	C2	H2	H3	119.6	120.5
N1	C3	H5	C2	118.8	240.8
H5	C3	C2	H3	303.8	169.9
H5	C3	C2	H2	184.1	49.5
N1	C3	H5	H4	239.4	120.4
N1	C3	H4	C2	241.2	119.2
H4	C3	C2	H3	64.2	49.5
H4	C3	C2	H2	304.5	289.0
N1	C3	H4	H5	120.6	239.6