PDB Chemical Component T6A

Ideal Model

Chemical Description

Name N-[N-(9-B-D-RIBOFURANOSYLPURIN-6-YL)CARBAMOYL]THREONINE-5'-MONOPHOSPHATE
Synonyms N-(NEBULARIN-6-YLCARBAMOYL)-L-THREONINE-5'-MONOPHOSPHATE
Formula C15 H21 N6 O11 P
Formal charge 0
Molecular weight 492.335 g/mol
Component type RNA LINKING
Nonstandard Parent Id A

Chemical features

Atom count 54
Chiral atom count 6
Chiral atoms C4' C3' C2' C1' C12 C14
Observed leaving atoms OP3 HO3'
Bond count 56
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) (2S,3R)-2-{[(9-{(2R,3R,4S,5R)-3,4-dihydroxy-5-[(phosphonooxy)methyl]tetrahydrofuran-2-yl}-9H-purin-6-yl)carbamoyl]amino}-3-hydroxybutanoic acid (non-preferred name)
Systematic name (OpenEye OEToolkits) (2S,3R)-2-[[9-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(phosphonooxymethyl)oxolan-2-yl]purin-6-yl]carbamoylamino]-3-hydroxy-butanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) C[C@@H](O)[C@H](NC(=O)Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O)C(O)=O
SMILES (CACTVS) C[CH](O)[CH](NC(=O)Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O)C(O)=O
Stereo SMILES (OpenEye) C[C@H]([C@@H](C(=O)O)NC(=O)Nc1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)O
InChI descriptor InChI=1S/C15H21N6O11P/c1-5(22)7(14(25)26)19-15(27)20-11-8-12(17-3-16-11)21(4-18-8)13-10(24)9(23)6(32-13)2-31-33(28,29)30/h3-7,9-10,13,22-24H,2H2,1H3,(H,25,26)(H2,28,29,30)(H2,16,17,19,20,27)/t5-,6-,7+,9-,10-,13-/m1/s1
InChIKey descriptor BHFCEFYJTLMMEQ-DWVDDHQFSA-N

Status Information

Last modified 2021-03-01
Created 1999-07-08
Release status REL
Model PDB code 1FL8
Processing site RCSB