PDB Chemical Component T53
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for T53
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CAA |
NBP |
1.466 |
1.469 |
| CAG |
CAF |
1.363 |
1.382 |
| CAG |
CAS |
1.359 |
1.383 |
| CAF |
CAP |
1.375 |
1.382 |
| CAS |
CBO |
1.367 |
1.386 |
| NBP |
CAW |
1.463 |
1.469 |
| NBP |
CAX |
1.466 |
1.470 |
| CAW |
CAY |
1.516 |
1.530 |
| CAX |
CAZ |
1.520 |
1.531 |
| CAP |
CBN |
1.365 |
1.387 |
| CBO |
CBN |
1.359 |
1.393 |
| CBO |
OBE |
1.334 |
1.360 |
| CBN |
NBD |
1.332 |
1.400 |
| CAY |
NBQ |
1.464 |
1.470 |
| CBA |
OBE |
1.395 |
1.429 |
| CBA |
CBJ |
1.484 |
1.506 |
| CBB |
NBQ |
1.440 |
1.469 |
| CBB |
CBI |
1.492 |
1.507 |
| CAZ |
NBQ |
1.463 |
1.469 |
| CAN |
CBI |
1.368 |
1.384 |
| CAN |
CAQ |
1.357 |
1.379 |
| NBD |
CBG |
1.302 |
1.348 |
| CBI |
CAO |
1.377 |
1.383 |
| OAC |
CBG |
1.169 |
1.216 |
| CBJ |
CAT |
1.366 |
1.382 |
| CBJ |
CAK |
1.362 |
1.383 |
| CBG |
CBL |
1.489 |
1.478 |
| CAQ |
CBK |
1.365 |
1.396 |
| CAT |
CBH |
1.371 |
1.383 |
| CAO |
CAR |
1.374 |
1.380 |
| CAK |
CAH |
1.368 |
1.383 |
| CBK |
CAR |
1.377 |
1.396 |
| CBK |
CBF |
1.472 |
1.479 |
| CBL |
CAU |
1.373 |
1.396 |
| CBL |
CAL |
1.393 |
1.396 |
| NBC |
CBF |
1.298 |
1.347 |
| NBC |
CAV |
1.420 |
1.465 |
| CBH |
CAJ |
1.369 |
1.382 |
| CBH |
CAV |
1.495 |
1.507 |
| CAH |
CAJ |
1.368 |
1.382 |
| CAU |
CBM |
1.363 |
1.380 |
| CBF |
OAB |
1.193 |
1.215 |
| OAE |
NBR |
1.367 |
1.218 |
| CAL |
CAI |
1.364 |
1.379 |
| CBM |
NBR |
1.373 |
1.481 |
| CBM |
CAM |
1.359 |
1.383 |
| NBR |
OAD |
1.363 |
1.218 |
| CAI |
CAM |
1.369 |
1.383 |
| CAU |
H1 |
1.080 |
1.079 |
| CAM |
H2 |
1.080 |
1.080 |
| CAI |
H3 |
1.080 |
1.080 |
| CAL |
H4 |
1.080 |
1.080 |
| NBD |
H5 |
1.000 |
0.970 |
| CAP |
H6 |
1.080 |
1.080 |
| CAF |
H7 |
1.080 |
1.081 |
| CAG |
H8 |
1.080 |
1.080 |
| CAS |
H9 |
1.080 |
1.080 |
| CBA |
H10 |
1.100 |
1.090 |
| CBA |
H11 |
1.100 |
1.090 |
| CAT |
H12 |
1.081 |
1.079 |
| CAK |
H13 |
1.080 |
1.080 |
| CAH |
H14 |
1.080 |
1.080 |
| CAJ |
H15 |
1.080 |
1.080 |
| CAV |
H16 |
1.100 |
1.090 |
| CAV |
H17 |
1.099 |
1.090 |
| NBC |
H18 |
0.999 |
0.970 |
| CAR |
H19 |
1.080 |
1.080 |
| CAO |
H20 |
1.080 |
1.079 |
| CAQ |
H21 |
1.080 |
1.080 |
| CAN |
H22 |
1.080 |
1.080 |
| CBB |
H23 |
1.100 |
1.090 |
| CBB |
H24 |
1.100 |
1.090 |
| CAY |
H26 |
1.100 |
1.091 |
| CAY |
H27 |
1.100 |
1.090 |
| CAW |
H28 |
1.100 |
1.090 |
| CAW |
H29 |
1.100 |
1.090 |
| CAA |
H31 |
1.100 |
1.090 |
| CAA |
H32 |
1.100 |
1.090 |
| CAA |
H33 |
1.100 |
1.090 |
| CAX |
H34 |
1.100 |
1.091 |
| CAX |
H35 |
1.100 |
1.090 |
| CAZ |
H36 |
1.100 |
1.090 |
| CAZ |
H37 |
1.100 |
1.090 |
Bond Angles for T53
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAA |
NBP |
CAX |
110.8 |
111.0 |
| CAG |
CAF |
H7 |
119.3 |
119.8 |
| CAG |
CAS |
CBO |
119.5 |
120.0 |
| CAS |
CAG |
H8 |
120.5 |
119.9 |
| CAG |
CAS |
H9 |
120.2 |
120.0 |
| CAF |
CAP |
H6 |
120.3 |
120.0 |
| CAS |
CBO |
OBE |
120.7 |
120.0 |
| CBO |
CAS |
H9 |
120.2 |
120.0 |
| NBP |
CAW |
H28 |
110.2 |
109.5 |
| NBP |
CAW |
H29 |
110.2 |
109.5 |
| NBP |
CAX |
CAZ |
107.3 |
109.4 |
| NBP |
CAX |
H34 |
110.0 |
109.5 |
| NBP |
CAX |
H35 |
110.0 |
109.5 |
| CAW |
CAY |
H26 |
109.1 |
109.5 |
| CAW |
CAY |
H27 |
109.1 |
109.5 |
| CAZ |
CAX |
H34 |
110.0 |
109.5 |
| CAZ |
CAX |
H35 |
110.0 |
109.5 |
| CAX |
CAZ |
H36 |
109.0 |
109.5 |
| CAX |
CAZ |
H37 |
109.0 |
109.4 |
| CBN |
NBD |
H5 |
116.7 |
120.0 |
| CBA |
CBJ |
CAT |
121.2 |
120.0 |
| CBA |
CBJ |
CAK |
118.8 |
120.0 |
| CBJ |
CBA |
H10 |
110.7 |
109.5 |
| CBJ |
CBA |
H11 |
110.6 |
109.5 |
| NBQ |
CBB |
H23 |
109.4 |
109.4 |
| NBQ |
CBB |
H24 |
109.4 |
109.5 |
| CBI |
CAN |
H22 |
120.0 |
119.9 |
| CAN |
CAQ |
H21 |
120.3 |
120.1 |
| CBI |
CAO |
H20 |
120.5 |
120.0 |
| CAT |
CBJ |
CAK |
119.9 |
120.0 |
| CBJ |
CAT |
CBH |
120.2 |
120.0 |
| CBJ |
CAT |
H12 |
119.9 |
120.0 |
| CBJ |
CAK |
CAH |
120.2 |
120.0 |
| CBJ |
CAK |
H13 |
119.9 |
120.0 |
| CAT |
CBH |
CAJ |
119.8 |
120.0 |
| CAT |
CBH |
CAV |
121.7 |
120.0 |
| CBH |
CAT |
H12 |
119.9 |
120.0 |
| CAO |
CAR |
H19 |
120.5 |
120.1 |
| CAK |
CAH |
CAJ |
120.0 |
120.0 |
| CAH |
CAK |
H13 |
119.9 |
120.0 |
| CAK |
CAH |
H14 |
120.0 |
120.0 |
| CBK |
CAR |
H19 |
120.5 |
120.1 |
| CBL |
CAU |
H1 |
119.7 |
120.1 |
| CBL |
CAL |
H4 |
120.3 |
120.0 |
| NBC |
CBF |
OAB |
123.2 |
120.0 |
| CBF |
NBC |
H18 |
119.3 |
120.1 |
| NBC |
CAV |
H16 |
109.2 |
109.5 |
| NBC |
CAV |
H17 |
109.2 |
109.5 |
| CBH |
CAJ |
H15 |
120.0 |
120.0 |
| CBH |
CAV |
H16 |
109.1 |
109.5 |
| CBH |
CAV |
H17 |
109.1 |
109.5 |
| CAJ |
CAH |
H14 |
120.0 |
120.0 |
| CAH |
CAJ |
H15 |
120.1 |
120.0 |
| CAU |
CBM |
CAM |
120.2 |
120.2 |
| CAL |
CAI |
H3 |
119.8 |
119.9 |
| CBM |
CAM |
H2 |
119.9 |
119.9 |
| CAI |
CAM |
H2 |
119.9 |
119.8 |
| H10 |
CBA |
H11 |
109.5 |
109.5 |
| H16 |
CAV |
H17 |
109.5 |
109.5 |
| H23 |
CBB |
H24 |
109.5 |
109.4 |
| H26 |
CAY |
H27 |
109.5 |
109.5 |
| H28 |
CAW |
H29 |
109.5 |
109.5 |
| H31 |
CAA |
H32 |
109.5 |
109.4 |
| H31 |
CAA |
H33 |
109.5 |
109.5 |
| H32 |
CAA |
H33 |
109.4 |
109.5 |
| H34 |
CAX |
H35 |
109.5 |
109.5 |
| H36 |
CAZ |
H37 |
109.5 |
109.5 |
Torsion Angles for T53
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CAA |
NBP |
CAW |
H28 |
291.0 |
175.5 |
| CAA |
NBP |
CAW |
H29 |
52.0 |
55.4 |
| CAA |
NBP |
CAX |
CAZ |
185.8 |
64.6 |
| CAA |
NBP |
CAX |
H34 |
305.5 |
184.6 |
| CAA |
NBP |
CAX |
H35 |
66.2 |
304.6 |
| CAG |
CAF |
CAP |
H6 |
178.8 |
180.1 |
| CAS |
CAG |
CAF |
H7 |
180.6 |
180.0 |
| CAG |
CAS |
CBO |
OBE |
180.4 |
180.0 |
| CBO |
CAS |
CAG |
H9 |
180.0 |
179.7 |
| CBO |
CAS |
CAG |
H8 |
179.4 |
179.7 |
| CAG |
CAS |
CBO |
H9 |
180.0 |
180.3 |
| NBP |
CAW |
CAY |
H26 |
180.0 |
181.6 |
| NBP |
CAW |
CAY |
H27 |
299.6 |
61.6 |
| H28 |
CAW |
NBP |
H29 |
239.0 |
120.0 |
| CAX |
NBP |
CAW |
H28 |
51.5 |
299.4 |
| CAX |
NBP |
CAW |
H29 |
172.5 |
179.3 |
| CAZ |
CAX |
NBP |
H34 |
240.3 |
240.0 |
| CAZ |
CAX |
NBP |
H35 |
119.6 |
120.0 |
| NBP |
CAX |
CAZ |
H36 |
63.4 |
298.4 |
| NBP |
CAX |
CAZ |
H37 |
182.8 |
178.4 |
| H34 |
CAX |
NBP |
H35 |
239.3 |
239.9 |
| H26 |
CAY |
CAW |
H27 |
240.5 |
120.1 |
| NBP |
CAX |
CAZ |
H34 |
119.6 |
120.0 |
| NBP |
CAX |
CAZ |
H35 |
240.3 |
240.0 |
| H34 |
CAX |
CAZ |
H35 |
120.7 |
120.1 |
| H36 |
CAZ |
CAX |
H37 |
240.6 |
120.1 |
| CAP |
CBN |
NBD |
H5 |
236.1 |
214.7 |
| CBO |
CBN |
NBD |
H5 |
53.7 |
34.4 |
| OBE |
CBO |
CAS |
H9 |
0.4 |
359.7 |
| CAY |
NBQ |
CBB |
H23 |
206.4 |
50.0 |
| CAY |
NBQ |
CBB |
H24 |
326.3 |
290.1 |
| CAT |
CBJ |
CBA |
CAK |
181.1 |
180.2 |
| CBA |
CBJ |
CAT |
CBH |
179.5 |
180.0 |
| CBA |
CBJ |
CAT |
H12 |
359.5 |
0.0 |
| CBA |
CBJ |
CAK |
CAH |
180.4 |
180.0 |
| CBA |
CBJ |
CAK |
H13 |
0.4 |
359.9 |
| H10 |
CBA |
CBJ |
H11 |
121.5 |
120.0 |
| H23 |
CBB |
NBQ |
H24 |
240.1 |
119.9 |
| CBB |
CBI |
CAN |
H22 |
0.1 |
359.2 |
| CBB |
CBI |
CAO |
H20 |
0.2 |
0.3 |
| CAZ |
NBQ |
CBB |
H23 |
327.6 |
173.8 |
| CAZ |
NBQ |
CBB |
H24 |
87.5 |
53.9 |
| CBI |
CAN |
CAQ |
H21 |
179.6 |
179.5 |
| CAN |
CBI |
CAO |
H20 |
180.3 |
179.5 |
| CBI |
CAO |
CAR |
H19 |
179.8 |
180.0 |
| CBA |
CBJ |
CAT |
CAK |
178.9 |
179.8 |
| CAT |
CBJ |
CBA |
H10 |
116.8 |
330.0 |
| CAT |
CBJ |
CBA |
H11 |
355.3 |
210.0 |
| CAT |
CBJ |
CAK |
CAH |
359.3 |
359.8 |
| CAT |
CBJ |
CAK |
H13 |
179.3 |
179.7 |
| CBJ |
CAT |
CBH |
CAJ |
359.8 |
0.1 |
| CBJ |
CAT |
CBH |
CAV |
180.0 |
180.0 |
| CBH |
CAT |
CBJ |
H12 |
180.0 |
179.9 |
| CBA |
CBJ |
CAK |
CAT |
181.1 |
180.2 |
| CAK |
CBJ |
CBA |
H10 |
295.7 |
149.8 |
| CAK |
CBJ |
CBA |
H11 |
174.1 |
29.8 |
| CAK |
CBJ |
CAT |
CBH |
0.6 |
0.2 |
| CAK |
CBJ |
CAT |
H12 |
180.6 |
180.2 |
| CBJ |
CAK |
CAH |
CAJ |
0.4 |
359.9 |
| CAH |
CAK |
CBJ |
H13 |
180.0 |
180.1 |
| CBJ |
CAK |
CAH |
H14 |
180.5 |
179.9 |
| CBG |
CBL |
CAU |
H1 |
1.0 |
0.0 |
| CBG |
CBL |
CAL |
H4 |
358.5 |
0.0 |
| CAQ |
CBK |
CAR |
H19 |
179.8 |
180.3 |
| CBH |
CAT |
CBJ |
CAK |
0.6 |
0.2 |
| CBJ |
CAT |
CBH |
H12 |
180.0 |
180.1 |
| CAT |
CBH |
CAJ |
H15 |
180.0 |
180.0 |
| CAT |
CBH |
CAV |
H16 |
239.8 |
210.1 |
| CAT |
CBH |
CAV |
H17 |
120.1 |
330.0 |
| CBK |
CAR |
CAO |
H19 |
180.0 |
180.1 |
| CBJ |
CAK |
CAH |
H13 |
180.0 |
179.9 |
| CAJ |
CAH |
CAK |
H14 |
180.0 |
180.0 |
| CAK |
CAH |
CAJ |
H15 |
179.9 |
180.0 |
| CAO |
CAR |
CBK |
H19 |
180.0 |
179.9 |
| CBK |
CBF |
NBC |
H18 |
4.8 |
360.0 |
| CAL |
CBL |
CAU |
H1 |
181.5 |
180.0 |
| CBL |
CAL |
CAI |
H3 |
181.8 |
180.2 |
| CBF |
NBC |
CAV |
H16 |
307.2 |
60.0 |
| CBF |
NBC |
CAV |
H17 |
66.9 |
300.0 |
| CBH |
CAV |
NBC |
H16 |
239.8 |
120.0 |
| CBH |
CAV |
NBC |
H17 |
120.2 |
240.0 |
| H16 |
CAV |
NBC |
H17 |
240.3 |
120.0 |
| CAT |
CBH |
CAJ |
CAV |
180.2 |
179.9 |
| CAJ |
CBH |
CAT |
H12 |
179.8 |
180.1 |
| CBH |
CAJ |
CAH |
H14 |
179.9 |
180.4 |
| CAH |
CAJ |
CBH |
H15 |
180.0 |
179.6 |
| CAT |
CBH |
CAV |
CAJ |
179.8 |
180.1 |
| CAV |
CBH |
CAT |
H12 |
360.0 |
359.9 |
| NBC |
CAV |
CBH |
H16 |
120.2 |
240.0 |
| NBC |
CAV |
CBH |
H17 |
239.8 |
120.0 |
| CAV |
CBH |
CAJ |
H15 |
359.8 |
0.1 |
| H16 |
CAV |
CBH |
H17 |
119.6 |
240.0 |
| CAT |
CBH |
CAJ |
CAH |
360.0 |
359.6 |
| CAJ |
CAH |
CAK |
H13 |
180.4 |
180.0 |
| CAK |
CAH |
CAJ |
H14 |
180.0 |
180.0 |
| CBH |
CAJ |
CAH |
H15 |
180.0 |
180.4 |
| CAU |
CBM |
CAM |
H2 |
180.3 |
179.7 |
| OAB |
CBF |
NBC |
H18 |
185.2 |
180.0 |
| CAL |
CAI |
CAM |
H2 |
179.0 |
180.1 |
| CAI |
CAM |
CBM |
H2 |
180.0 |
180.0 |
| CBM |
CAM |
CAI |
H2 |
180.0 |
180.0 |
| H1 |
CAU |
CBM |
CAM |
179.4 |
180.2 |
| H3 |
CAI |
CAM |
H2 |
359.0 |
0.0 |
| H4 |
CAL |
CAI |
H3 |
1.8 |
0.1 |
| H7 |
CAF |
CAP |
H6 |
358.8 |
0.0 |
| H8 |
CAG |
CAF |
H7 |
0.6 |
0.0 |
| H8 |
CAG |
CAS |
CBO |
179.4 |
179.7 |
| H8 |
CAG |
CAS |
H9 |
359.4 |
0.0 |
| CAG |
CAS |
H9 |
CBO |
180.0 |
179.7 |
| H9 |
CAS |
CAG |
H8 |
359.4 |
0.0 |
| H9 |
CAS |
CBO |
OBE |
0.4 |
359.7 |
| H10 |
CBA |
CBJ |
CAT |
116.8 |
330.0 |
| H10 |
CBA |
CBJ |
CAK |
295.7 |
149.8 |
| CBJ |
CBA |
H10 |
H11 |
237.8 |
240.0 |
| H11 |
CBA |
CBJ |
CAT |
355.3 |
210.0 |
| H11 |
CBA |
CBJ |
CAK |
174.1 |
29.8 |
| CBJ |
CBA |
H11 |
H10 |
122.2 |
120.0 |
| H12 |
CAT |
CBJ |
CAK |
180.6 |
180.2 |
| CBJ |
CAT |
H12 |
CBH |
180.0 |
179.9 |
| H12 |
CAT |
CBH |
CAJ |
179.8 |
180.1 |
| H12 |
CAT |
CBH |
CAV |
360.0 |
359.9 |
| CBJ |
CAK |
H13 |
CAH |
180.0 |
180.1 |
| H13 |
CAK |
CAH |
CAJ |
180.4 |
180.0 |
| H13 |
CAK |
CAH |
H14 |
0.4 |
0.0 |
| CAK |
CAH |
H14 |
CAJ |
180.0 |
180.0 |
| H14 |
CAH |
CAK |
H13 |
0.4 |
0.0 |
| H14 |
CAH |
CAJ |
H15 |
359.9 |
360.0 |
| H15 |
CAJ |
CAH |
H14 |
359.9 |
360.0 |
| NBC |
CAV |
H16 |
H17 |
119.5 |
240.0 |
| CBH |
CAV |
H16 |
H17 |
240.6 |
120.0 |
| NBC |
CAV |
H17 |
H16 |
240.5 |
120.0 |
| CBH |
CAV |
H17 |
H16 |
119.4 |
240.0 |
| H18 |
NBC |
CBF |
OAB |
185.2 |
180.0 |
| H18 |
NBC |
CAV |
H16 |
127.2 |
240.0 |
| H18 |
NBC |
CAV |
H17 |
246.9 |
120.0 |
| H20 |
CAO |
CAR |
H19 |
359.8 |
360.0 |
| H22 |
CAN |
CAQ |
H21 |
359.6 |
0.3 |
| NBQ |
CBB |
H23 |
H24 |
119.9 |
240.1 |
| NBQ |
CBB |
H24 |
H23 |
240.2 |
119.9 |
| CAW |
CAY |
H26 |
H27 |
119.3 |
239.9 |
| CAW |
CAY |
H27 |
H26 |
240.7 |
120.1 |
| NBP |
CAW |
H28 |
H29 |
121.4 |
239.9 |
| H28 |
CAW |
CAY |
H26 |
60.5 |
301.6 |
| H28 |
CAW |
CAY |
H27 |
180.0 |
181.5 |
| NBP |
CAW |
H29 |
H28 |
238.6 |
120.1 |
| H29 |
CAW |
CAY |
H26 |
299.5 |
61.6 |
| H29 |
CAW |
CAY |
H27 |
59.1 |
301.6 |
| H31 |
CAA |
NBP |
CAX |
60.9 |
296.2 |
| H32 |
CAA |
H31 |
H33 |
120.0 |
120.0 |
| H32 |
CAA |
NBP |
CAX |
181.0 |
56.2 |
| H31 |
CAA |
H32 |
H33 |
240.0 |
240.0 |
| H33 |
CAA |
NBP |
CAX |
300.9 |
176.2 |
| H31 |
CAA |
H33 |
H32 |
120.0 |
120.0 |
| NBP |
CAX |
H34 |
CAZ |
242.0 |
240.1 |
| NBP |
CAX |
H34 |
H35 |
121.0 |
120.0 |
| CAZ |
CAX |
H34 |
H35 |
239.0 |
239.9 |
| H34 |
CAX |
CAZ |
H36 |
303.8 |
178.5 |
| H34 |
CAX |
CAZ |
H37 |
63.2 |
58.4 |
| NBP |
CAX |
H35 |
CAZ |
118.0 |
119.9 |
| NBP |
CAX |
H35 |
H34 |
239.0 |
240.0 |
| CAZ |
CAX |
H35 |
H34 |
121.0 |
120.1 |
| H35 |
CAX |
CAZ |
H36 |
183.1 |
58.4 |
| H35 |
CAX |
CAZ |
H37 |
302.5 |
298.3 |
| H36 |
CAZ |
CAX |
H34 |
303.8 |
178.5 |
| H36 |
CAZ |
CAX |
H35 |
183.1 |
58.4 |
| CAX |
CAZ |
H36 |
H37 |
119.1 |
240.0 |
| H37 |
CAZ |
CAX |
H34 |
63.2 |
58.4 |
| H37 |
CAZ |
CAX |
H35 |
302.5 |
298.3 |
| CAX |
CAZ |
H37 |
H36 |
240.9 |
120.0 |