PDB Chemical Component T47
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for T47
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C |
1.507 |
1.507 |
C1 |
O |
1.226 |
1.212 |
N |
C1 |
1.356 |
1.348 |
C2 |
N |
1.463 |
1.470 |
C3 |
C2 |
1.512 |
1.532 |
N1 |
C3 |
1.466 |
1.469 |
C4 |
N1 |
1.468 |
1.469 |
C5 |
C4 |
1.508 |
1.507 |
C6 |
C5 |
1.385 |
1.382 |
C7 |
C6 |
1.384 |
1.382 |
C8 |
C7 |
1.380 |
1.383 |
C9 |
C8 |
1.377 |
1.383 |
CL1 |
C9 |
1.741 |
1.737 |
C9 |
C10 |
1.376 |
1.384 |
C10 |
C5 |
1.383 |
1.383 |
N1 |
C11 |
1.466 |
1.470 |
C11 |
C12 |
1.511 |
1.532 |
C12 |
N |
1.459 |
1.472 |
C4 |
H6 |
1.100 |
1.090 |
C4 |
H7 |
1.100 |
1.090 |
C6 |
H8 |
1.080 |
1.081 |
C7 |
H9 |
1.079 |
1.079 |
C8 |
H10 |
1.080 |
1.080 |
C10 |
H11 |
1.081 |
1.079 |
C |
H |
1.100 |
1.089 |
C |
H17 |
1.100 |
1.090 |
C |
H1 |
1.100 |
1.090 |
C11 |
H12 |
1.100 |
1.090 |
C11 |
H13 |
1.100 |
1.091 |
C12 |
H14 |
1.101 |
1.090 |
C12 |
H15 |
1.100 |
1.090 |
C2 |
H2 |
1.099 |
1.090 |
C2 |
H3 |
1.100 |
1.089 |
C3 |
H4 |
1.100 |
1.091 |
C3 |
H5 |
1.100 |
1.090 |
Bond Angles for T47
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
C1 |
C |
118.1 |
120.0 |
C1 |
C |
H |
109.5 |
109.5 |
C1 |
C |
H17 |
109.5 |
109.5 |
C1 |
C |
H1 |
109.5 |
109.4 |
N |
C1 |
O |
122.7 |
120.0 |
N1 |
C3 |
C2 |
112.0 |
109.4 |
C3 |
C2 |
H2 |
109.4 |
109.6 |
C3 |
C2 |
H3 |
109.4 |
109.8 |
C4 |
N1 |
C3 |
109.9 |
111.0 |
C11 |
N1 |
C3 |
110.9 |
111.3 |
N1 |
C3 |
H4 |
108.8 |
109.5 |
N1 |
C3 |
H5 |
108.8 |
109.5 |
C4 |
N1 |
C11 |
112.1 |
111.0 |
C5 |
C4 |
H6 |
108.2 |
109.5 |
C5 |
C4 |
H7 |
108.2 |
109.5 |
C7 |
C6 |
H8 |
119.7 |
120.0 |
C8 |
C7 |
H9 |
119.7 |
120.0 |
C9 |
C8 |
H10 |
120.8 |
120.0 |
C9 |
C10 |
H11 |
119.8 |
120.0 |
N1 |
C11 |
C12 |
110.7 |
109.3 |
N1 |
C11 |
H12 |
109.2 |
109.5 |
N1 |
C11 |
H13 |
109.2 |
109.4 |
C12 |
C11 |
H12 |
109.2 |
109.5 |
C12 |
C11 |
H13 |
109.2 |
109.5 |
C11 |
C12 |
H14 |
109.6 |
109.6 |
C11 |
C12 |
H15 |
109.6 |
109.6 |
H6 |
C4 |
H7 |
109.5 |
109.4 |
H |
C |
H17 |
109.4 |
109.5 |
H |
C |
H1 |
109.5 |
109.5 |
H17 |
C |
H1 |
109.5 |
109.5 |
H12 |
C11 |
H13 |
109.4 |
109.5 |
H14 |
C12 |
H15 |
109.5 |
109.8 |
H2 |
C2 |
H3 |
109.4 |
109.6 |
H4 |
C3 |
H5 |
109.5 |
109.5 |
Torsion Angles for T47
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N |
C1 |
C |
O |
179.5 |
179.9 |
H |
C |
C1 |
H17 |
240.0 |
240.0 |
H |
C |
C1 |
H1 |
120.0 |
120.0 |
H17 |
C |
C1 |
H1 |
240.0 |
240.0 |
N |
C1 |
O |
C |
180.5 |
180.1 |
O |
C1 |
C |
H |
0.0 |
185.4 |
O |
C1 |
C |
H17 |
120.0 |
305.5 |
O |
C1 |
C |
H1 |
240.0 |
65.5 |
N |
C1 |
C |
H |
179.5 |
5.4 |
N |
C1 |
C |
H17 |
299.5 |
125.4 |
N |
C1 |
C |
H1 |
59.5 |
245.4 |
N1 |
C3 |
C2 |
N |
55.2 |
53.8 |
C4 |
N1 |
C3 |
C2 |
181.8 |
172.8 |
C11 |
N1 |
C3 |
C2 |
306.3 |
297.0 |
N1 |
C3 |
C2 |
H4 |
239.6 |
119.9 |
N1 |
C3 |
C2 |
H5 |
120.4 |
240.0 |
H2 |
C2 |
C3 |
H3 |
119.9 |
120.5 |
N1 |
C3 |
C2 |
H2 |
295.1 |
294.1 |
N1 |
C3 |
C2 |
H3 |
175.3 |
173.7 |
C4 |
N1 |
C3 |
C11 |
235.5 |
235.8 |
C3 |
N1 |
C11 |
C12 |
55.6 |
63.1 |
C3 |
N1 |
C11 |
H12 |
175.8 |
183.0 |
C3 |
N1 |
C11 |
H13 |
295.4 |
303.1 |
H4 |
C3 |
N1 |
H5 |
119.2 |
239.9 |
C11 |
N1 |
C4 |
C3 |
236.2 |
235.6 |
C4 |
N1 |
C3 |
H4 |
61.5 |
292.7 |
C4 |
N1 |
C3 |
H5 |
302.2 |
52.8 |
C4 |
N1 |
C11 |
C12 |
178.9 |
187.3 |
C4 |
N1 |
C11 |
H12 |
299.1 |
307.3 |
C4 |
N1 |
C11 |
H13 |
58.7 |
67.4 |
C5 |
C4 |
N1 |
C3 |
158.7 |
190.0 |
C5 |
C4 |
N1 |
C11 |
34.9 |
65.7 |
H6 |
C4 |
C5 |
H7 |
118.6 |
120.0 |
C6 |
C5 |
C4 |
H6 |
324.5 |
330.0 |
C6 |
C5 |
C4 |
H7 |
205.9 |
210.0 |
C8 |
C7 |
C6 |
H8 |
179.6 |
180.0 |
C9 |
C8 |
C7 |
H9 |
180.6 |
180.0 |
CL1 |
C9 |
C8 |
H10 |
359.9 |
0.1 |
CL1 |
C9 |
C10 |
H11 |
359.8 |
0.0 |
C10 |
C9 |
C8 |
H10 |
179.5 |
179.9 |
C10 |
C5 |
C4 |
H6 |
144.6 |
149.7 |
C10 |
C5 |
C4 |
H7 |
26.0 |
29.8 |
C4 |
N1 |
C11 |
C3 |
123.2 |
124.2 |
C11 |
N1 |
C3 |
H4 |
186.0 |
56.9 |
C11 |
N1 |
C3 |
H5 |
66.7 |
177.0 |
C12 |
C11 |
N1 |
H12 |
239.8 |
240.0 |
C12 |
C11 |
N1 |
H13 |
120.2 |
119.9 |
N1 |
C11 |
C12 |
H14 |
60.4 |
186.5 |
N1 |
C11 |
C12 |
H15 |
180.5 |
65.9 |
H12 |
C11 |
N1 |
H13 |
240.4 |
239.9 |
C12 |
C11 |
N1 |
C3 |
55.6 |
63.1 |
N1 |
C11 |
C12 |
H12 |
120.2 |
120.0 |
N1 |
C11 |
C12 |
H13 |
239.8 |
240.1 |
H12 |
C11 |
C12 |
H13 |
119.6 |
120.1 |
H14 |
C12 |
C11 |
H15 |
239.9 |
120.6 |
N1 |
C11 |
C12 |
N |
300.5 |
306.2 |
H6 |
C4 |
N1 |
C3 |
279.4 |
310.1 |
H6 |
C4 |
N1 |
C11 |
155.6 |
185.7 |
C5 |
C4 |
H6 |
H7 |
242.2 |
240.0 |
H7 |
C4 |
N1 |
C3 |
37.9 |
70.0 |
H7 |
C4 |
N1 |
C11 |
274.2 |
305.6 |
C5 |
C4 |
H7 |
H6 |
117.8 |
120.0 |
H9 |
C7 |
C6 |
H8 |
359.6 |
0.0 |
H10 |
C8 |
C7 |
H9 |
0.6 |
359.9 |
C1 |
C |
H |
H17 |
120.0 |
120.0 |
C1 |
C |
H |
H1 |
240.0 |
240.1 |
H17 |
C |
H |
H1 |
120.0 |
120.0 |
C1 |
C |
H17 |
H |
240.0 |
240.0 |
C1 |
C |
H17 |
H1 |
120.0 |
120.0 |
H |
C |
H17 |
H1 |
240.0 |
240.0 |
C1 |
C |
H1 |
H |
120.0 |
120.0 |
C1 |
C |
H1 |
H17 |
240.0 |
240.0 |
H |
C |
H1 |
H17 |
120.0 |
120.0 |
H12 |
C11 |
N1 |
C3 |
175.8 |
183.0 |
N1 |
C11 |
H12 |
C12 |
238.9 |
240.1 |
N1 |
C11 |
H12 |
H13 |
119.5 |
120.0 |
C12 |
C11 |
H12 |
H13 |
240.6 |
239.9 |
H12 |
C11 |
C12 |
H14 |
300.2 |
66.5 |
H12 |
C11 |
C12 |
H15 |
60.3 |
305.9 |
H13 |
C11 |
N1 |
C3 |
295.4 |
303.1 |
N1 |
C11 |
H13 |
C12 |
121.1 |
119.8 |
N1 |
C11 |
H13 |
H12 |
240.5 |
240.0 |
C12 |
C11 |
H13 |
H12 |
119.4 |
120.1 |
H13 |
C11 |
C12 |
H14 |
180.6 |
306.4 |
H13 |
C11 |
C12 |
H15 |
300.7 |
185.8 |
H14 |
C12 |
C11 |
H12 |
300.2 |
66.5 |
H14 |
C12 |
C11 |
H13 |
180.6 |
306.4 |
C11 |
C12 |
H14 |
H15 |
120.2 |
239.5 |
H15 |
C12 |
C11 |
H12 |
60.3 |
305.9 |
H15 |
C12 |
C11 |
H13 |
300.7 |
185.8 |
C11 |
C12 |
H15 |
H14 |
239.8 |
120.5 |
C3 |
C2 |
H2 |
H3 |
240.2 |
239.4 |
C3 |
C2 |
H3 |
H2 |
119.8 |
120.4 |
N1 |
C3 |
H4 |
C2 |
122.3 |
240.1 |
H4 |
C3 |
C2 |
H2 |
55.5 |
174.2 |
H4 |
C3 |
C2 |
H3 |
295.6 |
53.7 |
N1 |
C3 |
H4 |
H5 |
241.2 |
120.1 |
N1 |
C3 |
H5 |
C2 |
237.7 |
119.9 |
H5 |
C3 |
C2 |
H2 |
174.7 |
54.1 |
H5 |
C3 |
C2 |
H3 |
54.9 |
293.7 |
N1 |
C3 |
H5 |
H4 |
118.8 |
239.9 |