PDB Chemical Component T3M

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for T3M

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O26	C24	1.400	1.347
C24	O25	1.189	1.215
C24	C23	1.528	1.476
C23	C22	1.432	1.398
C23	C27	1.413	1.398
C22	C21	1.407	1.376
C21	C20	1.364	1.395
C27	C28	1.361	1.376
C28	C20	1.484	1.396
C20	C19	1.522	1.481
C19	N14	1.347	1.328
C19	C17	1.438	1.405
N14	C13	1.306	1.329
C17	N18	1.439	1.386
C17	N16	1.354	1.326
N16	C15	1.306	1.321
C15	C13	1.478	1.395
C13	C12	1.517	1.483
C12	C4	1.417	1.394
C12	C11	1.372	1.394
C4	C3	1.435	1.383
C11	C8	1.475	1.384
C8	O9	1.403	1.360
C8	C5	1.360	1.391
O9	C10	1.402	1.429
C5	O6	1.393	1.360
C5	C3	1.407	1.391
O6	C7	1.403	1.429
C3	O2	1.397	1.360
O2	C1	1.398	1.429
O26	H26	0.950	0.968
C22	H22	1.080	1.080
C27	H27	1.080	1.080
C21	H21	1.080	1.081
C28	H28	1.080	1.080
N18	H181	1.000	0.970
N18	H182	1.001	0.970
C15	H15	1.079	1.080
C4	H4	1.080	1.080
C11	H11	1.080	1.080
C10	H101	1.100	1.090
C10	H102	1.099	1.089
C10	H103	1.100	1.089
C7	H71C	1.100	1.090
C7	H72C	1.099	1.090
C7	H73C	1.100	1.090
C1	H11C	1.100	1.090
C1	H12C	1.100	1.089
C1	H13C	1.100	1.090

Bond Angles for T3M

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O26	C24	O25	120.2	120.0
O26	C24	C23	120.5	120.0
C24	O26	H26	109.5	117.0
O25	C24	C23	119.3	120.0
C24	C23	C22	119.9	120.0
C24	C23	C27	119.9	120.0
C22	C23	C27	120.1	120.0
C23	C22	C21	119.9	119.9
C23	C22	H22	120.1	120.0
C23	C27	C28	120.3	120.0
C23	C27	H27	119.8	120.0
C22	C21	C20	120.0	120.1
C21	C22	H22	120.1	120.1
C22	C21	H21	120.0	120.0
C21	C20	C28	120.3	120.0
C21	C20	C19	119.4	120.0
C20	C21	H21	120.0	120.0
C27	C28	C20	119.4	120.0
C28	C27	H27	119.9	120.0
C27	C28	H28	120.3	120.0
C28	C20	C19	120.2	120.0
C20	C28	H28	120.3	120.0
C20	C19	N14	120.1	120.1
C20	C19	C17	120.1	120.1
N14	C19	C17	119.8	119.8
C19	N14	C13	119.7	119.9
C19	C17	N18	121.3	120.0
C19	C17	N16	120.6	119.9
N14	C13	C15	120.6	120.1
N14	C13	C12	119.4	119.9
N18	C17	N16	118.1	120.1
C17	N18	H181	109.5	120.0
C17	N18	H182	109.5	120.0
C17	N16	C15	119.4	120.2
N16	C15	C13	119.9	120.2
N16	C15	H15	120.1	119.9
C15	C13	C12	119.6	120.0
C13	C15	H15	120.1	119.9
C13	C12	C4	120.5	120.0
C13	C12	C11	118.8	120.1
C4	C12	C11	120.7	119.9
C12	C4	C3	118.8	120.0
C12	C4	H4	120.6	120.0
C12	C11	C8	119.9	120.0
C12	C11	H11	120.0	120.0
C4	C3	C5	120.3	120.1
C4	C3	O2	120.2	120.0
C3	C4	H4	120.6	120.0
C11	C8	O9	121.3	120.0
C11	C8	C5	119.4	120.1
C8	C11	H11	120.0	120.1
O9	C8	C5	119.4	120.0
C8	O9	C10	119.8	117.0
C8	C5	O6	119.1	120.0
C8	C5	C3	120.9	120.0
O9	C10	H101	109.5	109.4
O9	C10	H102	109.4	109.5
O9	C10	H103	109.4	109.5
O6	C5	C3	119.9	120.0
C5	O6	C7	118.4	117.0
C5	C3	O2	119.4	119.9
O6	C7	H71C	109.5	109.4
O6	C7	H72C	109.5	109.5
O6	C7	H73C	109.5	109.5
C3	O2	C1	119.3	117.0
O2	C1	H11C	109.5	109.4
O2	C1	H12C	109.4	109.5
O2	C1	H13C	109.5	109.5
H181	N18	H182	109.5	119.9
H101	C10	H102	109.5	109.5
H101	C10	H103	109.5	109.5
H102	C10	H103	109.5	109.5
H71C	C7	H72C	109.5	109.5
H71C	C7	H73C	109.5	109.5
H72C	C7	H73C	109.5	109.5
H11C	C1	H12C	109.5	109.5
H11C	C1	H13C	109.5	109.5
H12C	C1	H13C	109.5	109.5

Torsion Angles for T3M

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O25	C24	O26	C23	178.0	180.0
O26	C24	C23	C22	22.7	180.0
O26	C24	C23	C27	198.5	359.7
O26	C24	O25	C23	182.0	180.0
O25	C24	O26	H26	360.0	0.1
O25	C24	C23	C22	204.6	360.0
O25	C24	C23	C27	20.5	179.7
O26	C24	C23	O25	178.0	180.0
C23	C24	O26	H26	182.0	180.0
C22	C23	C24	C27	184.1	180.3
C24	C23	C22	C21	176.6	180.0
C24	C23	C22	H22	356.6	359.9
C24	C23	C27	C28	183.7	180.0
C24	C23	C27	H27	3.7	360.0
C24	C23	C22	C27	175.8	179.7
C22	C23	C27	C28	359.5	359.7
C22	C23	C27	H27	179.5	179.7
C23	C22	C21	C20	0.4	360.0
C21	C22	C23	H22	180.0	180.1
C23	C22	C21	H21	180.4	180.0
C24	C23	C27	C22	184.2	180.3
C27	C23	C22	C21	0.8	0.3
C27	C23	C22	H22	180.7	180.2
C23	C27	C28	C20	359.2	0.0
C28	C27	C23	H27	180.0	180.0
C23	C27	C28	H28	179.2	180.0
C21	C22	C23	C27	0.8	0.3
C23	C22	C21	H22	180.0	179.9
C22	C21	C20	C28	358.3	359.8
C22	C21	C20	C19	182.4	180.0
C20	C21	C22	H21	180.0	180.0
C20	C21	C22	H22	180.4	180.0
C22	C21	C20	H21	180.0	180.0
C27	C28	C20	C21	1.9	0.2
C28	C20	C21	C19	175.9	179.8
C21	C20	C28	H28	181.9	180.2
C21	C20	C19	N14	300.8	44.2
C21	C20	C19	C17	118.2	223.9
C23	C27	C28	H27	180.0	180.0
C21	C20	C28	C27	1.9	0.2
C27	C28	C20	C19	177.8	180.0
C20	C28	C27	H28	180.0	180.0
C21	C20	C28	C19	184.1	180.2
C28	C20	C21	H21	178.3	179.8
C20	C28	C27	H27	179.2	180.0
C27	C28	C20	H28	180.0	180.0
C28	C20	C19	N14	124.9	224.4
C28	C20	C19	C17	302.3	44.1
C21	C20	C19	C28	175.9	179.8
C19	C20	C21	H21	2.4	360.0
C19	C20	C28	H28	357.8	0.0
N14	C19	C20	C17	182.6	180.3
C20	C19	N14	C13	176.9	180.0
C20	C19	C17	N18	3.0	0.1
C20	C19	C17	N16	180.7	180.0
C20	C19	N14	C17	177.4	179.7
N14	C19	C17	N18	180.4	179.8
N14	C19	C17	N16	358.1	359.7
C19	N14	C13	C15	3.6	0.0
C19	N14	C13	C12	176.5	180.0
C20	C19	C17	N14	182.6	180.3
C17	C19	N14	C13	359.5	0.2
N18	C17	C19	N16	182.3	180.1
C19	C17	N18	H181	167.1	8.5
C19	C17	N18	H182	287.1	188.5
C19	C17	N16	C15	0.8	0.0
C13	N14	C19	C17	359.5	0.2
N16	C15	C13	N14	355.3	359.7
C15	C13	N14	C12	187.1	180.0
N14	C13	C15	H15	175.3	180.0
N14	C13	C12	C4	178.2	185.1
N14	C13	C12	C11	356.2	4.7
C19	C17	N18	N16	177.7	179.9
N18	C17	N16	C15	178.6	180.0
H181	N18	C17	H182	240.0	180.0
C19	C17	N16	N18	182.2	180.1
N16	C17	N18	H181	349.4	188.6
N16	C17	N18	H182	109.4	8.6
C17	N16	C15	C13	2.3	0.2
C17	N16	C15	H15	182.3	180.0
N14	C13	C15	N16	355.3	359.7
N16	C15	C13	C12	182.4	179.8
C13	C15	N16	H15	180.0	180.3
N14	C13	C15	C12	172.9	180.0
N16	C15	C13	H15	180.0	179.7
C15	C13	C12	C4	351.2	5.0
C15	C13	C12	C11	169.2	184.7
N14	C13	C12	C15	187.0	180.0
C12	C13	C15	H15	2.4	0.0
C4	C12	C13	C11	182.0	180.3
C13	C12	C4	C3	178.3	180.0
C13	C12	C4	H4	358.2	359.9
C13	C12	C11	C8	181.9	180.0
C13	C12	C11	H11	1.9	0.0
C13	C12	C4	C11	178.0	179.7
C4	C12	C11	C8	359.9	359.7
C4	C12	C11	H11	179.9	179.7
C12	C4	C3	C5	0.0	0.0
C12	C4	C3	O2	182.8	180.0
C3	C4	C12	H4	180.0	180.1
C13	C12	C11	C4	182.0	180.3
C11	C12	C4	C3	0.3	0.3
C11	C12	C4	H4	180.2	180.2
C12	C11	C8	O9	179.7	180.0
C12	C11	C8	C5	359.6	0.0
C8	C11	C12	H11	180.0	180.0
C3	C4	C12	C11	0.3	0.3
C12	C4	C3	H4	180.0	179.9
C8	C5	C3	C4	359.5	359.7
O6	C5	C3	C4	179.6	180.0
C5	C3	C4	O2	177.2	180.0
C4	C3	O2	C1	344.9	0.0
C12	C11	C8	H11	180.0	180.0
O9	C8	C11	C5	180.1	180.0
C11	C8	O9	C10	6.4	360.0
C11	C8	C5	O6	180.6	180.0
C11	C8	C5	C3	0.7	0.3
C11	C8	O9	C5	179.9	180.0
O9	C8	C11	H11	359.6	0.0
O9	C8	C5	O6	0.6	360.0
O9	C8	C5	C3	180.6	180.3
C8	O9	C10	H101	276.9	60.0
C8	O9	C10	H102	36.9	180.0
C8	O9	C10	H103	156.9	300.1
C4	C3	C5	C8	359.5	359.7
C11	C8	C5	O9	180.1	180.0
C5	C8	C11	H11	179.6	180.0
C5	C8	O9	C10	186.5	180.0
O6	C5	C8	C3	179.9	179.7
C8	C5	O6	C7	280.6	90.0
C8	C5	C3	O2	176.7	179.7
C10	O9	C8	C5	186.5	180.0
H101	C10	O9	H102	240.0	240.0
H101	C10	O9	H103	120.0	120.0
H102	C10	O9	H103	240.0	239.9
C4	C3	C5	O6	179.6	180.0
C8	C5	O6	C3	180.1	180.3
O6	C5	C3	O2	356.7	0.0
C5	O6	C7	H71C	97.8	180.0
C5	O6	C7	H72C	217.8	300.0
C5	O6	C7	H73C	337.8	60.0
C4	C3	C5	O2	182.8	180.0
C5	C3	C4	H4	180.0	180.1
C8	C5	C3	O6	179.9	179.7
C3	C5	O6	C7	100.5	269.7
C5	C3	O2	C1	167.8	180.0
C7	O6	C5	C3	100.5	269.7
H71C	C7	O6	H72C	240.0	240.0
H71C	C7	O6	H73C	120.0	120.0
H72C	C7	O6	H73C	240.0	240.0
C4	C3	O2	C5	177.2	180.0
O2	C3	C4	H4	2.9	0.1
C3	O2	C1	H11C	160.3	300.0
C3	O2	C1	H12C	280.3	60.0
C3	O2	C1	H13C	40.3	180.0
H11C	C1	O2	H12C	240.0	240.0
H11C	C1	O2	H13C	120.0	120.0
H12C	C1	O2	H13C	240.0	240.0
H26	O26	C24	O25	360.0	0.1
H26	O26	C24	C23	182.0	180.0
H22	C22	C23	C27	180.7	180.2
C23	C22	H22	C21	180.0	180.1
H22	C22	C21	C20	180.4	180.0
H22	C22	C21	H21	0.4	0.0
C23	C27	H27	C28	180.0	180.0
H27	C27	C28	C20	179.2	180.0
H27	C27	C28	H28	359.2	0.0
C22	C21	H21	C20	180.0	180.0
H21	C21	C22	H22	0.4	0.0
H21	C21	C20	C28	178.3	179.8
H21	C21	C20	C19	2.4	360.0
C27	C28	H28	C20	180.0	180.0
H28	C28	C27	H27	359.2	0.0
H28	C28	C20	C19	357.8	0.0
H181	N18	C17	N16	349.4	188.6
C17	N18	H181	H182	120.0	180.0
H182	N18	C17	N16	109.4	8.6
C17	N18	H182	H181	240.0	180.0
N16	C15	H15	C13	180.0	180.3
H15	C15	C13	C12	2.4	0.0
H4	C4	C12	C11	180.2	180.2
C12	C4	H4	C3	180.0	180.1
H4	C4	C3	C5	180.0	180.1
H4	C4	C3	O2	2.9	0.1
C12	C11	H11	C8	180.0	180.0
H11	C11	C8	O9	359.6	0.0
H11	C11	C8	C5	179.6	180.0
O9	C10	H101	H102	120.0	120.0
O9	C10	H101	H103	240.0	240.0
H102	C10	H101	H103	120.0	120.1
O9	C10	H102	H101	240.0	240.1
O9	C10	H102	H103	120.0	120.0
H101	C10	H102	H103	240.0	239.9
O9	C10	H103	H101	120.0	119.9
O9	C10	H103	H102	240.0	240.0
H101	C10	H103	H102	120.0	120.1
O6	C7	H71C	H72C	120.0	120.0
O6	C7	H71C	H73C	240.0	240.0
H72C	C7	H71C	H73C	120.0	120.0
O6	C7	H72C	H71C	240.0	240.0
O6	C7	H72C	H73C	120.0	120.0
H71C	C7	H72C	H73C	240.0	240.0
O6	C7	H73C	H71C	120.0	120.0
O6	C7	H73C	H72C	240.0	240.0
H71C	C7	H73C	H72C	120.0	120.0
O2	C1	H11C	H12C	120.0	120.0
O2	C1	H11C	H13C	240.0	240.0
H12C	C1	H11C	H13C	120.0	120.0
O2	C1	H12C	H11C	240.0	240.0
O2	C1	H12C	H13C	120.0	120.0
H11C	C1	H12C	H13C	240.0	239.9
O2	C1	H13C	H11C	120.0	120.0
O2	C1	H13C	H12C	240.0	240.0
H11C	C1	H13C	H12C	120.0	120.0