PDB Chemical Component T3E

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for T3E

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C7A N6A 1.458 1.465
N6A C3A 1.441 1.381
C3A N2A 1.380 1.301
C3A S4A 1.635 1.709
N2A C1A 1.474 1.312
C1A C8A 1.463 1.507
C1A C5A 1.419 1.354
C5A C4 1.480 1.470
C5A S4A 1.566 1.762
C4 N3 1.366 1.333
C4 C5 1.364 1.417
N3 C2 1.401 1.323
C2 N7 1.435 1.383
C2 N1 1.368 1.327
N7 C1B 1.453 1.398
C1B C2B 1.381 1.390
C1B C6B 1.417 1.388
C2B C3B 1.402 1.380
C3B S7B 1.765 1.762
C3B C4B 1.407 1.382
S7B O8B 1.454 1.421
S7B N9B 1.642 1.656
S7B O1B 1.457 1.421
C4B C5B 1.400 1.383
C5B C6B 1.421 1.381
N1 C6 1.373 1.321
C6 C5 1.386 1.399
C5 C8 1.482 1.432
C8 N9 1.150 1.136
C7A H7A1 1.100 1.089
C7A H7A2 1.100 1.090
C7A H7A3 1.100 1.090
N6A H6A 1.000 0.970
C8A H8A1 1.100 1.090
C8A H8A2 1.100 1.090
C8A H8A3 1.100 1.091
N7 H7 1.000 0.970
C2B H2B 1.080 1.081
C6B H6B 1.080 1.080
C4B H4B 1.080 1.081
N9B H9B1 1.000 0.970
N9B H9B2 1.000 0.970
C5B H5B 1.080 1.081
C6 H6 1.080 1.080

Bond Angles for T3E

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C7A N6A C3A 120.0 120.0
N6A C7A H7A1 109.5 109.5
N6A C7A H7A2 109.5 109.5
N6A C7A H7A3 109.5 109.4
C7A N6A H6A 106.8 120.0
N6A C3A N2A 124.3 124.8
N6A C3A S4A 127.8 124.8
C3A N6A H6A 106.8 120.0
N2A C3A S4A 107.8 110.3
C3A N2A C1A 110.5 117.1
C3A S4A C5A 102.3 90.4
N2A C1A C8A 119.0 122.9
N2A C1A C5A 112.2 114.3
C8A C1A C5A 128.7 122.9
C1A C8A H8A1 109.5 109.5
C1A C8A H8A2 109.5 109.5
C1A C8A H8A3 109.4 109.5
C1A C5A C4 131.1 126.0
C1A C5A S4A 107.1 107.9
C4 C5A S4A 121.8 126.1
C5A C4 N3 119.8 120.6
C5A C4 C5 120.8 120.6
N3 C4 C5 119.4 118.7
C4 N3 C2 119.1 120.7
C4 C5 C6 120.6 118.1
C4 C5 C8 120.8 121.0
N3 C2 N7 121.9 118.9
N3 C2 N1 122.5 122.2
N7 C2 N1 115.6 118.9
C2 N7 C1B 121.3 120.0
C2 N7 H7 119.3 120.0
C2 N1 C6 116.7 121.3
N7 C1B C2B 113.6 120.1
N7 C1B C6B 126.7 120.1
C1B N7 H7 119.3 120.0
C2B C1B C6B 119.8 119.9
C1B C2B C3B 118.8 119.9
C1B C2B H2B 120.6 120.0
C1B C6B C5B 121.3 119.9
C1B C6B H6B 119.3 120.1
C2B C3B S7B 116.1 119.9
C2B C3B C4B 122.6 120.1
C3B C2B H2B 120.6 120.0
S7B C3B C4B 121.3 119.9
C3B S7B O8B 106.9 106.4
C3B S7B N9B 108.4 107.2
C3B S7B O1B 106.7 106.4
C3B C4B C5B 119.1 120.1
C3B C4B H4B 120.5 120.0
O8B S7B N9B 109.6 106.4
O8B S7B O1B 114.1 123.2
N9B S7B O1B 110.9 106.4
S7B N9B H9B1 109.5 120.0
S7B N9B H9B2 109.5 120.0
C4B C5B C6B 118.5 120.1
C5B C4B H4B 120.5 119.9
C4B C5B H5B 120.8 119.9
C5B C6B H6B 119.3 120.0
C6B C5B H5B 120.8 120.0
N1 C6 C5 121.7 119.1
N1 C6 H6 119.1 120.5
C6 C5 C8 118.5 120.9
C5 C6 H6 119.2 120.5
C5 C8 N9 176.7 180.0
H7A1 C7A H7A2 109.5 109.5
H7A1 C7A H7A3 109.4 109.5
H7A2 C7A H7A3 109.4 109.4
H8A1 C8A H8A2 109.5 109.5
H8A1 C8A H8A3 109.5 109.5
H8A2 C8A H8A3 109.5 109.4
H9B1 N9B H9B2 109.4 120.0

Torsion Angles for T3E

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C7A N6A C3A N2A 93.0 0.1
C7A N6A C3A S4A 274.4 179.7
C3A N6A C7A H6A 238.5 180.0
H7A1 C7A N6A H7A2 240.0 240.0
H7A1 C7A N6A H7A3 120.0 120.0
H7A2 C7A N6A H7A3 240.0 240.0
C3A N6A C7A H7A1 180.0 300.0
C3A N6A C7A H7A2 300.0 60.0
C3A N6A C7A H7A3 60.0 179.9
C7A N6A C3A H6A 121.5 180.0
N2A C3A N6A S4A 178.6 180.4
N6A C3A N2A C1A 180.6 179.9
N6A C3A S4A C5A 180.5 180.0
N6A C3A N2A S4A 181.2 179.6
N2A C3A N6A H6A 331.5 180.0
N2A C3A S4A C5A 1.7 359.7
C3A N2A C1A C8A 177.4 180.0
C3A N2A C1A C5A 359.1 0.0
N6A C3A S4A N2A 178.8 180.4
S4A C3A N6A H6A 152.9 359.6
S4A C3A N2A C1A 359.4 0.3
C1A C5A S4A C3A 357.9 0.3
C4 C5A S4A C3A 179.3 180.0
C1A N2A C3A S4A 359.4 0.3
C8A C1A N2A C5A 178.3 180.0
N2A C1A C8A H8A1 0.0 90.0
N2A C1A C8A H8A2 120.0 210.0
N2A C1A C8A H8A3 240.0 330.0
N2A C1A C5A C4 180.4 180.0
N2A C1A C5A S4A 2.0 359.7
N2A C1A C8A C5A 182.0 180.0
C8A C1A C5A C4 2.3 0.0
C8A C1A C5A S4A 183.9 179.7
H8A1 C8A C1A H8A2 240.0 239.9
H8A1 C8A C1A H8A3 120.0 120.0
H8A2 C8A C1A H8A3 240.0 240.0
C3A S4A C5A C1A 357.9 0.3
N2A C1A C5A C8A 178.1 180.0
C5A C1A C8A H8A1 178.0 270.0
C5A C1A C8A H8A2 298.0 30.0
C5A C1A C8A H8A3 58.0 150.0
C4 C5A C1A S4A 178.4 180.3
C1A C5A C4 N3 214.7 359.9
C1A C5A C4 C5 37.6 179.7
C3A S4A C5A C4 179.3 180.0
C1A C5A C4 S4A 181.8 179.6
N3 C4 C5A C5 177.1 180.2
C5A C4 N3 C2 181.7 180.0
C5A C4 C5 C6 179.1 179.8
C5A C4 C5 C8 2.1 360.0
C1A C5A S4A C4 178.6 180.3
S4A C5A C4 N3 32.9 180.3
S4A C5A C4 C5 215.9 0.1
N3 C4 C5A S4A 32.9 180.3
C5A C4 N3 C5 182.9 179.8
N3 C4 C5 C6 2.0 359.6
N3 C4 C5 C8 185.0 179.8
C4 N3 C2 N7 180.3 180.0
C4 N3 C2 N1 359.6 0.0
C5 C4 C5A S4A 215.9 0.1
C5A C4 C5 N3 177.1 180.2
C5 C4 N3 C2 358.8 0.2
N1 C6 C5 C4 358.8 0.5
C6 C5 C4 C8 177.0 179.8
C4 C5 C6 H6 178.8 180.2
C4 C5 C8 N9 263.7 140.1
C2 N3 C4 C5 358.8 0.2
N7 C2 N3 N1 180.7 180.0
N3 C2 N7 C1B 351.6 174.5
N3 C2 N7 H7 171.6 354.5
N3 C2 N1 C6 1.1 0.0
N3 C2 N7 N1 179.4 180.0
N7 C2 N1 C6 180.5 180.0
C2 N7 C1B C2B 165.9 146.3
C2 N7 C1B C6B 345.9 326.0
C1B N7 C2 H7 180.0 180.0
N3 C2 N1 N7 180.6 180.0
N1 C2 N7 C1B 172.2 354.5
N1 C2 N7 H7 352.3 174.5
C2 N1 C6 C5 359.7 359.7
C2 N1 C6 H6 179.7 180.0
C1B N7 C2 N1 172.2 354.5
C2 N7 C1B H7 180.0 180.0
C2B C1B N7 C6B 180.0 180.3
N7 C1B C2B C3B 180.4 180.0
N7 C1B C2B H2B 0.4 360.0
N7 C1B C6B C5B 180.5 179.7
N7 C1B C6B H6B 0.5 0.0
N7 C1B C2B C6B 180.0 179.7
C2B C1B N7 H7 345.9 326.3
C2B C1B C6B C5B 0.5 359.5
C2B C1B C6B H6B 180.5 179.8
C1B C2B C3B S7B 178.2 180.0
C1B C2B C3B C4B 359.2 0.0
C3B C2B C1B H2B 180.0 180.0
N7 C1B C6B C2B 180.1 180.3
C6B C1B N7 H7 165.8 146.0
C6B C1B C2B C3B 0.4 0.2
C6B C1B C2B H2B 180.4 180.2
C4B C5B C6B C1B 359.0 0.6
C5B C6B C1B H6B 180.0 179.7
C1B C6B C5B H5B 179.0 180.2
C3B C2B C1B C6B 0.4 0.2
C1B C2B C3B H2B 180.0 180.0
S7B C3B C2B C4B 179.0 180.0
C2B C3B S7B O8B 179.6 336.5
C2B C3B S7B N9B 61.6 90.0
C2B C3B S7B O1B 302.1 203.5
C2B C3B C4B C5B 0.3 0.0
C2B C3B C4B H4B 180.3 180.0
C2B C3B S7B C4B 181.0 180.0
S7B C3B C2B H2B 358.2 0.0
S7B C3B C4B C5B 181.3 180.0
S7B C3B C4B H4B 1.4 0.0
O8B S7B C3B N9B 118.1 246.5
O8B S7B C3B O1B 237.5 133.0
N9B S7B C3B O1B 119.5 246.5
C3B S7B N9B H9B1 180.0 150.0
C3B S7B N9B H9B2 300.0 330.0
C2B C3B C4B S7B 178.9 180.0
C4B C3B C2B H2B 179.2 180.0
C4B C3B S7B O8B 358.6 156.5
C4B C3B S7B N9B 240.5 270.0
C4B C3B S7B O1B 121.1 23.5
C3B C4B C5B C6B 0.6 359.7
C5B C4B C3B H4B 180.0 180.0
C3B C4B C5B H5B 180.6 180.0
O8B S7B C3B C4B 358.6 156.5
C3B S7B O8B N9B 242.7 114.1
C3B S7B O8B O1B 117.8 237.0
N9B S7B O8B O1B 235.0 122.9
O8B S7B N9B H9B1 63.7 263.6
O8B S7B N9B H9B2 183.6 83.6
N9B S7B C3B C4B 240.5 270.0
C3B S7B N9B O8B 116.4 246.4
C3B S7B N9B O1B 243.2 113.5
O8B S7B N9B O1B 126.8 227.1
H9B1 N9B S7B H9B2 240.0 180.1
O1B S7B C3B C4B 121.1 23.5
C3B S7B O1B O8B 242.1 123.0
C3B S7B O1B N9B 117.8 245.9
O8B S7B O1B N9B 235.7 122.9
O1B S7B N9B H9B1 296.9 36.5
O1B S7B N9B H9B2 56.8 216.5
C1B C6B C5B C4B 359.0 0.6
C3B C4B C5B H4B 180.0 180.0
C4B C5B C6B H6B 179.0 180.3
C6B C5B C4B H5B 180.0 179.7
C1B C6B C5B H6B 180.0 180.3
C6B C5B C4B H4B 180.5 179.7
C4B C5B C6B H5B 180.0 180.3
C4 C5 C6 N1 358.8 0.5
N1 C6 C5 C8 175.8 180.3
C5 C6 N1 H6 180.0 179.7
C4 C5 C6 C8 182.9 180.2
N1 C6 C5 H6 180.0 180.3
C6 C5 C8 N9 86.6 320.2
C4 C5 C8 C6 177.1 179.8
C8 C5 C6 H6 355.9 360.0
H7A1 C7A N6A C3A 180.0 300.0
N6A C7A H7A1 H7A2 120.0 120.0
N6A C7A H7A1 H7A3 240.0 240.0
H7A1 C7A N6A H6A 301.5 120.0
H7A2 C7A H7A1 H7A3 119.9 120.0
H7A2 C7A N6A C3A 300.0 60.0
N6A C7A H7A2 H7A1 240.0 240.0
N6A C7A H7A2 H7A3 120.0 120.0
H7A2 C7A N6A H6A 61.5 240.0
H7A1 C7A H7A2 H7A3 240.1 240.0
H7A3 C7A N6A C3A 60.0 179.9
N6A C7A H7A3 H7A1 120.0 120.0
N6A C7A H7A3 H7A2 240.0 240.0
H7A3 C7A N6A H6A 181.5 360.0
H7A1 C7A H7A3 H7A2 120.0 120.0
C7A N6A H6A C3A 230.5 180.0
H6A N6A C7A H7A1 301.5 120.0
H6A N6A C7A H7A2 61.5 240.0
H6A N6A C7A H7A3 181.5 360.0
H6A N6A C3A N2A 331.5 180.0
H6A N6A C3A S4A 152.9 359.6
H8A1 C8A C1A C5A 178.0 270.0
C1A C8A H8A1 H8A2 120.0 120.0
C1A C8A H8A1 H8A3 240.0 240.0
H8A2 C8A H8A1 H8A3 120.0 120.0
H8A2 C8A C1A C5A 298.0 30.0
C1A C8A H8A2 H8A1 240.0 240.0
C1A C8A H8A2 H8A3 120.0 120.0
H8A1 C8A H8A2 H8A3 240.0 240.0
H8A3 C8A C1A C5A 58.0 150.0
C1A C8A H8A3 H8A1 120.0 120.0
C1A C8A H8A3 H8A2 240.0 240.0
H8A1 C8A H8A3 H8A2 120.0 120.0
H7 N7 C2 N1 352.3 174.5
C2 N7 H7 C1B 180.0 180.0
H7 N7 C1B C2B 345.9 326.3
H7 N7 C1B C6B 165.8 146.0
H2B C2B C1B C6B 180.4 180.2
C1B C2B H2B C3B 180.0 180.0
H2B C2B C3B S7B 358.2 0.0
H2B C2B C3B C4B 179.2 180.0
C1B C6B H6B C5B 180.0 179.7
H6B C6B C5B H5B 359.0 360.0
C3B C4B H4B C5B 180.0 180.0
H4B C4B C5B C6B 180.5 179.7
H4B C4B C5B H5B 0.5 0.0
H9B1 N9B S7B O1B 296.9 36.5
S7B N9B H9B1 H9B2 120.0 179.9
H9B2 N9B S7B O1B 56.8 216.5
S7B N9B H9B2 H9B1 240.0 180.1
C4B C5B H5B C6B 180.0 179.7
H5B C5B C4B H4B 0.5 0.0
H5B C5B C6B H6B 359.0 360.0
N1 C6 H6 C5 180.0 179.7
H6 C6 C5 C8 355.9 360.0