PDB Chemical Component T3C

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for T3C

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C01 N02 1.452 1.464
N02 C03 1.435 1.382
C03 N04 1.332 1.300
C03 S30 1.727 1.710
N04 C05 1.347 1.311
C05 C06 1.541 1.507
C05 C07 1.417 1.354
C07 C08 1.387 1.469
C07 S30 1.678 1.762
C08 N09 1.374 1.333
C08 C27 1.421 1.418
N09 C10 1.349 1.323
C10 N11 1.461 1.383
C10 N25 1.371 1.328
N11 C12 1.425 1.398
C12 C13 1.435 1.389
C12 C24 1.409 1.387
C13 C14 1.386 1.382
C14 C15 1.409 1.381
C15 C16 1.404 1.390
C16 N17 1.478 1.397
C16 C24 1.427 1.388
N17 C18 1.451 1.400
N17 C23 1.432 1.477
C18 C19 1.501 1.545
C19 C20 1.511 1.507
C20 N21 1.443 1.480
N21 C22 1.453 1.477
C22 C23 1.510 1.507
N25 C26 1.373 1.321
C26 C27 1.390 1.399
C27 C28 1.482 1.432
C28 N29 1.144 1.137
C01 H011 1.100 1.091
C01 H012 1.100 1.089
C01 H013 1.100 1.090
N02 H02 1.000 0.970
C06 H061 1.100 1.091
C06 H062 1.099 1.089
C06 H063 1.100 1.090
N11 H11 1.000 0.970
C13 H13 1.080 1.080
C24 H24 1.080 1.080
C14 H14 1.080 1.080
C15 H15 1.080 1.080
C18 H181 1.100 1.090
C18 H182 1.100 1.090
C23 H231 1.100 1.089
C23 H232 1.100 1.090
C19 H191 1.100 1.089
C19 H192 1.100 1.089
C20 H201 1.100 1.090
C20 H202 1.100 1.090
N21 H21 1.000 1.009
C22 H221 1.100 1.089
C22 H222 1.100 1.091
C26 H26 1.080 1.080

Bond Angles for T3C

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C01 N02 C03 117.5 120.0
N02 C01 H011 109.5 109.5
N02 C01 H012 109.5 109.5
N02 C01 H013 109.4 109.5
C01 N02 H02 107.4 120.0
N02 C03 N04 129.2 124.8
N02 C03 S30 126.3 124.8
C03 N02 H02 107.4 119.9
N04 C03 S30 104.5 110.3
C03 N04 C05 116.6 117.2
C03 S30 C07 99.3 90.4
N04 C05 C06 117.3 122.9
N04 C05 C07 117.3 114.3
C06 C05 C07 125.3 122.8
C05 C06 H061 109.5 109.4
C05 C06 H062 109.5 109.5
C05 C06 H063 109.5 109.4
C05 C07 C08 133.1 126.1
C05 C07 S30 102.2 107.9
C08 C07 S30 124.7 126.0
C07 C08 N09 118.8 120.7
C07 C08 C27 121.8 120.7
N09 C08 C27 119.4 118.7
C08 N09 C10 120.2 120.7
C08 C27 C26 118.8 118.1
C08 C27 C28 121.0 120.9
N09 C10 N11 121.0 119.0
N09 C10 N25 121.7 122.1
N11 C10 N25 117.3 118.9
C10 N11 C12 124.7 120.0
C10 N11 H11 117.7 119.9
C10 N25 C26 119.8 121.3
N11 C12 C13 114.5 120.0
N11 C12 C24 125.5 120.0
C12 N11 H11 117.7 120.0
C13 C12 C24 120.0 119.9
C12 C13 C14 120.3 120.1
C12 C13 H13 119.8 120.0
C12 C24 C16 119.2 119.9
C12 C24 H24 120.4 120.1
C13 C14 C15 119.6 120.2
C14 C13 H13 119.9 120.0
C13 C14 H14 120.2 119.9
C14 C15 C16 121.3 120.1
C15 C14 H14 120.2 119.9
C14 C15 H15 119.3 120.0
C15 C16 N17 117.4 120.0
C15 C16 C24 119.5 119.9
C16 C15 H15 119.4 120.0
N17 C16 C24 123.1 120.1
C16 N17 C18 126.2 111.0
C16 N17 C23 107.0 111.0
C16 C24 H24 120.4 120.1
C18 N17 C23 114.8 114.6
N17 C18 C19 117.5 111.5
N17 C18 H181 107.4 109.1
N17 C18 H182 107.4 109.1
N17 C23 C22 114.5 108.1
N17 C23 H231 108.2 109.7
N17 C23 H232 108.2 109.7
C18 C19 C20 113.6 108.9
C19 C18 H181 107.4 109.0
C19 C18 H182 107.4 109.1
C18 C19 H191 108.4 109.5
C18 C19 H192 108.5 109.5
C19 C20 N21 114.3 113.0
C20 C19 H191 108.5 109.6
C20 C19 H192 108.4 109.6
C19 C20 H201 108.2 108.8
C19 C20 H202 108.2 108.8
C20 N21 C22 118.9 113.8
N21 C20 H201 108.3 108.8
N21 C20 H202 108.3 108.8
C20 N21 H21 107.1 111.0
N21 C22 C23 115.2 111.9
C22 N21 H21 107.1 111.0
N21 C22 H221 108.1 109.0
N21 C22 H222 108.0 108.9
C22 C23 H231 108.2 109.8
C22 C23 H232 108.2 109.8
C23 C22 H221 108.0 109.0
C23 C22 H222 108.0 109.0
N25 C26 C27 120.1 119.1
N25 C26 H26 120.0 120.5
C26 C27 C28 120.3 120.9
C27 C26 H26 120.0 120.5
C27 C28 N29 179.7 180.0
H011 C01 H012 109.5 109.5
H011 C01 H013 109.4 109.4
H012 C01 H013 109.5 109.5
H061 C06 H062 109.5 109.5
H061 C06 H063 109.4 109.4
H062 C06 H063 109.5 109.5
H181 C18 H182 109.5 109.0
H231 C23 H232 109.5 109.8
H191 C19 H192 109.5 109.7
H201 C20 H202 109.5 108.6
H221 C22 H222 109.5 108.9

Torsion Angles for T3C

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C01 N02 C03 N04 199.2 0.0
C01 N02 C03 S30 20.1 179.7
C03 N02 C01 H02 238.8 180.0
H011 C01 N02 H012 240.0 240.0
H011 C01 N02 H013 120.0 119.9
H012 C01 N02 H013 240.0 240.0
C03 N02 C01 H011 180.0 300.0
C03 N02 C01 H012 300.0 60.0
C03 N02 C01 H013 60.0 180.1
C01 N02 C03 H02 121.2 180.0
N04 C03 N02 S30 179.2 180.3
N02 C03 N04 C05 179.9 180.0
N02 C03 S30 C07 180.7 179.9
N02 C03 N04 S30 180.7 179.8
N04 C03 N02 H02 78.1 180.0
N04 C03 S30 C07 1.4 359.7
C03 N04 C05 C06 179.9 180.0
C03 N04 C05 C07 359.6 0.0
N02 C03 S30 N04 179.3 180.2
S30 C03 N02 H02 258.9 359.7
S30 C03 N04 C05 359.2 0.2
C05 C07 S30 C03 358.5 0.3
C08 C07 S30 C03 179.4 180.1
C05 N04 C03 S30 359.2 0.2
C06 C05 N04 C07 180.3 180.0
N04 C05 C06 H061 360.0 90.0
N04 C05 C06 H062 120.0 210.0
N04 C05 C06 H063 240.0 330.0
N04 C05 C07 C08 180.3 180.0
N04 C05 C07 S30 1.4 359.8
N04 C05 C06 C07 179.6 180.0
C06 C05 C07 C08 359.9 0.0
C06 C05 C07 S30 181.0 179.8
H061 C06 C05 H062 239.9 240.0
H061 C06 C05 H063 120.0 119.9
H062 C06 C05 H063 240.0 240.0
C03 S30 C07 C05 358.5 0.3
N04 C05 C07 C06 180.4 180.0
C07 C05 C06 H061 180.3 269.9
C07 C05 C06 H062 300.4 29.9
C07 C05 C06 H063 60.3 150.0
C08 C07 C05 S30 178.9 180.2
C05 C07 C08 N09 227.5 360.0
C05 C07 C08 C27 48.5 179.7
C03 S30 C07 C08 179.4 180.1
C05 C07 C08 S30 181.3 179.7
N09 C08 C07 C27 179.0 180.3
C07 C08 N09 C10 180.2 180.0
C07 C08 C27 C26 180.1 179.8
C07 C08 C27 C28 0.9 0.0
C05 C07 S30 C08 179.0 180.2
S30 C07 C08 N09 46.2 180.3
S30 C07 C08 C27 227.2 360.0
N09 C08 C07 S30 46.2 180.3
C07 C08 N09 C27 181.0 179.7
N09 C08 C27 C26 1.2 359.5
N09 C08 C27 C28 182.0 179.7
C08 N09 C10 N11 181.0 180.0
C08 N09 C10 N25 0.2 360.0
C27 C08 C07 S30 227.2 360.0
C07 C08 C27 N09 179.0 180.3
C27 C08 N09 C10 359.2 0.3
N25 C26 C27 C08 359.1 0.5
C26 C27 C08 C28 179.2 179.8
C08 C27 C26 H26 179.1 180.3
C08 C27 C28 N29 350.6 254.4
C10 N09 C08 C27 359.2 0.3
N11 C10 N09 N25 180.8 180.1
N09 C10 N11 C12 340.9 174.5
N09 C10 N11 H11 160.9 354.5
N09 C10 N25 C26 0.1 0.0
N09 C10 N11 N25 179.2 179.9
N11 C10 N25 C26 179.3 180.0
C10 N11 C12 C13 201.5 146.2
C10 N11 C12 C24 22.5 326.0
C12 N11 C10 H11 180.0 180.0
N09 C10 N25 N11 180.8 180.1
N25 C10 N11 C12 161.7 354.5
N25 C10 N11 H11 341.7 174.5
C10 N25 C26 C27 0.3 359.7
C10 N25 C26 H26 180.3 179.9
C12 N11 C10 N25 161.7 354.5
C10 N11 C12 H11 180.0 180.0
C13 C12 N11 C24 178.9 180.3
N11 C12 C13 C14 180.1 180.0
N11 C12 C13 H13 0.1 0.0
N11 C12 C24 C16 180.1 179.7
N11 C12 C24 H24 0.1 360.0
N11 C12 C13 C24 181.0 179.7
C13 C12 N11 H11 21.5 326.2
C13 C12 C24 C16 1.2 359.4
C13 C12 C24 H24 181.2 179.7
C12 C13 C14 C15 0.1 0.0
C14 C13 C12 H13 180.0 180.0
C12 C13 C14 H14 180.1 180.0
N11 C12 C24 C13 178.9 180.3
C24 C12 N11 H11 202.6 146.0
C24 C12 C13 C14 359.1 0.3
C24 C12 C13 H13 179.0 180.3
C15 C16 C24 C12 359.3 0.6
N17 C16 C24 C12 180.3 180.2
C16 C24 C12 H24 180.0 179.7
C14 C13 C12 C24 359.1 0.3
C12 C13 C14 H13 180.0 180.0
C13 C14 C15 C16 0.4 0.0
C15 C14 C13 H14 180.0 180.0
C13 C14 C15 H15 180.4 180.0
C15 C14 C13 H13 180.1 180.0
C13 C14 C15 H14 180.0 180.0
C14 C15 C16 N17 179.0 180.0
C14 C15 C16 C24 359.9 359.7
C16 C15 C14 H15 180.0 180.0
C12 C24 C16 C15 359.3 0.6
C16 C15 C14 H14 180.4 180.1
C14 C15 C16 H15 180.0 180.0
N17 C16 C15 C24 179.1 180.4
C15 C16 N17 C18 340.2 360.0
C15 C16 N17 C23 120.2 128.7
C15 C16 C24 H24 179.3 180.3
C12 C24 C16 N17 180.3 180.2
C15 C16 N17 C24 180.9 179.6
N17 C16 C15 H15 359.0 0.0
N17 C16 C24 H24 0.3 359.9
C18 N17 C16 C23 219.9 231.3
C16 N17 C18 C19 103.2 188.2
C16 N17 C18 H181 224.3 308.7
C16 N17 C18 H182 342.0 67.6
C16 N17 C23 C22 160.6 152.0
C16 N17 C23 H231 281.3 271.6
C16 N17 C23 H232 39.9 32.3
C12 C24 C16 H24 180.0 180.3
C15 C16 C24 N17 179.0 180.4
C24 C16 C15 H15 179.9 179.7
C24 C16 N17 C18 159.2 180.3
C24 C16 N17 C23 299.3 309.0
C18 N17 C16 C24 159.2 180.3
C16 N17 C18 C23 137.5 126.8
C18 N17 C23 C22 305.8 278.7
C18 N17 C23 H231 66.5 38.4
C18 N17 C23 H232 185.0 159.1
N17 C18 C19 C20 72.2 284.0
C19 C18 N17 H181 238.8 239.5
C19 C18 N17 H182 121.1 120.5
N17 C18 C19 H191 192.8 43.9
N17 C18 C19 H192 311.6 164.2
H181 C18 N17 H182 242.3 241.1
C23 N17 C16 C24 299.3 309.0
C16 N17 C23 C18 214.8 233.2
C23 N17 C18 C19 325.7 61.4
C23 N17 C18 H181 86.9 181.9
C23 N17 C18 H182 204.6 300.9
N21 C22 C23 N17 57.3 94.6
C22 C23 N17 H231 239.3 240.4
C22 C23 N17 H232 120.7 119.7
N17 C23 C22 H221 296.5 333.9
N17 C23 C22 H222 178.2 215.2
H231 C23 N17 H232 241.5 239.3
C19 C18 N17 C23 325.7 61.4
N17 C18 C19 H181 121.1 120.5
N17 C18 C19 H182 238.8 239.5
C18 C19 C20 N21 359.5 92.6
C20 C19 C18 H191 239.4 240.2
C20 C19 C18 H192 120.6 119.8
C18 C19 C20 H201 120.3 213.6
C18 C19 C20 H202 238.8 331.8
H181 C18 C19 H182 117.7 118.9
H191 C19 C18 H192 241.2 239.7
C20 C19 C18 H181 311.0 163.5
C20 C19 C18 H182 193.3 44.5
C18 C19 C20 H191 120.6 119.8
C18 C19 C20 H192 239.4 240.2
C19 C20 N21 C22 291.5 318.3
N21 C20 C19 H201 239.3 239.1
N21 C20 C19 H202 120.7 120.9
C19 C20 N21 H21 52.8 84.3
H191 C19 C20 H192 118.8 120.4
H201 C20 C19 H202 241.4 241.8
N21 C20 C19 H191 238.9 332.8
N21 C20 C19 H192 120.2 212.4
C19 C20 N21 H201 120.7 120.9
C19 C20 N21 H202 239.3 239.1
C20 N21 C22 C23 31.8 318.8
C22 N21 C20 H21 238.7 234.0
C20 N21 C22 H221 152.6 79.5
C20 N21 C22 H222 271.0 198.2
H201 C20 N21 H202 118.6 118.2
N17 C23 C22 N21 57.3 94.6
C22 N21 C20 H201 170.8 197.4
C22 N21 C20 H202 52.2 79.2
C20 N21 C22 H21 121.3 126.0
N21 C22 C23 H231 296.6 335.0
N21 C22 C23 H232 178.0 214.3
C23 C22 N21 H221 239.2 239.3
C23 C22 N21 H222 120.8 120.6
H221 C22 N21 H222 241.6 241.3
N17 C23 C22 H231 120.7 119.6
N17 C23 C22 H232 239.3 240.4
C23 C22 N21 H21 270.5 192.8
N21 C22 C23 H221 120.9 120.7
N21 C22 C23 H222 239.2 239.4
H231 C23 C22 H232 118.6 120.8
H221 C22 C23 H222 118.3 118.7
C08 C27 C26 N25 359.1 0.5
N25 C26 C27 C28 178.3 180.3
C27 C26 N25 H26 180.0 179.8
C08 C27 C26 C28 180.8 180.2
N25 C26 C27 H26 180.0 180.2
C26 C27 C28 N29 171.4 74.6
C08 C27 C28 C26 179.2 179.8
C28 C27 C26 H26 358.3 0.0
H011 C01 N02 C03 180.0 300.0
N02 C01 H011 H012 120.0 120.0
N02 C01 H011 H013 240.0 240.0
H011 C01 N02 H02 301.1 120.0
H012 C01 H011 H013 120.0 120.0
H012 C01 N02 C03 300.0 60.0
N02 C01 H012 H011 240.0 240.0
N02 C01 H012 H013 120.0 120.0
H012 C01 N02 H02 61.2 240.0
H011 C01 H012 H013 240.0 240.0
H013 C01 N02 C03 60.0 180.1
N02 C01 H013 H011 120.0 120.0
N02 C01 H013 H012 240.0 239.9
H013 C01 N02 H02 181.2 0.1
H011 C01 H013 H012 120.0 120.0
C01 N02 H02 C03 232.7 180.0
H02 N02 C01 H011 301.1 120.0
H02 N02 C01 H012 61.2 240.0
H02 N02 C01 H013 181.2 0.1
H02 N02 C03 N04 78.1 180.0
H02 N02 C03 S30 258.9 359.7
H061 C06 C05 C07 180.3 269.9
C05 C06 H061 H062 120.0 120.0
C05 C06 H061 H063 240.0 240.1
H062 C06 H061 H063 120.0 120.0
H062 C06 C05 C07 300.4 29.9
C05 C06 H062 H061 239.9 240.0
C05 C06 H062 H063 120.0 120.0
H061 C06 H062 H063 240.0 240.0
H063 C06 C05 C07 60.3 150.0
C05 C06 H063 H061 120.0 119.9
C05 C06 H063 H062 240.0 240.0
H061 C06 H063 H062 120.0 120.0
H11 N11 C10 N25 341.7 174.5
C10 N11 H11 C12 180.0 180.0
H11 N11 C12 C13 21.5 326.2
H11 N11 C12 C24 202.6 146.0
H13 C13 C12 C24 179.0 180.3
C12 C13 H13 C14 180.0 180.0
H13 C13 C14 C15 180.1 180.0
H13 C13 C14 H14 0.1 360.0
C12 C24 H24 C16 180.0 179.7
C13 C14 H14 C15 180.0 180.0
H14 C14 C13 H13 0.1 360.0
H14 C14 C15 C16 180.4 180.1
H14 C14 C15 H15 0.4 0.0
C14 C15 H15 C16 180.0 180.0
H15 C15 C14 H14 0.4 0.0
H15 C15 C16 N17 359.0 0.0
H15 C15 C16 C24 179.9 179.7
H181 C18 N17 C23 86.9 181.9
N17 C18 H181 C19 232.7 238.0
N17 C18 H181 H182 116.4 119.0
H181 C18 C19 C20 311.0 163.5
C19 C18 H181 H182 243.6 241.0
H181 C18 C19 H191 71.7 283.3
H181 C18 C19 H192 190.5 43.6
H182 C18 N17 C23 204.6 300.9
N17 C18 H182 C19 127.3 122.0
N17 C18 H182 H181 243.6 241.0
H182 C18 C19 C20 193.3 44.5
C19 C18 H182 H181 116.4 119.0
H182 C18 C19 H191 314.0 164.4
H182 C18 C19 H192 72.7 284.7
N17 C23 H231 C22 235.4 241.4
N17 C23 H231 H232 117.7 120.7
C22 C23 H231 H232 242.3 239.3
H231 C23 C22 H221 175.7 214.3
H231 C23 C22 H222 57.4 95.6
N17 C23 H232 C22 124.6 118.6
N17 C23 H232 H231 242.3 239.4
C22 C23 H232 H231 117.7 120.7
H232 C23 C22 H221 57.2 93.6
H232 C23 C22 H222 298.9 334.8
C18 C19 H191 C20 236.3 240.5
H191 C19 C18 H181 71.7 283.3
H191 C19 C18 H182 314.0 164.4
C18 C19 H191 H192 118.2 120.3
H191 C19 C20 N21 238.9 332.8
C20 C19 H191 H192 241.9 239.7
H191 C19 C20 H201 359.6 93.8
H191 C19 C20 H202 118.2 211.9
C18 C19 H192 C20 123.7 119.4
H192 C19 C18 H181 190.5 43.6
H192 C19 C18 H182 72.7 284.7
C18 C19 H192 H191 241.9 239.7
H192 C19 C20 N21 120.2 212.4
C20 C19 H192 H191 118.1 120.3
H192 C19 C20 H201 240.9 333.4
H192 C19 C20 H202 359.4 91.6
C19 C20 H201 N21 235.6 236.5
H201 C20 C19 H191 359.6 93.8
H201 C20 C19 H192 240.9 333.4
C19 C20 H201 H202 117.8 118.3
H201 C20 N21 C22 170.8 197.4
N21 C20 H201 H202 242.2 241.8
H201 C20 N21 H21 292.1 323.4
C19 C20 H202 N21 124.4 123.4
H202 C20 C19 H191 118.2 211.9
H202 C20 C19 H192 359.4 91.6
C19 C20 H202 H201 242.2 241.7
H202 C20 N21 C22 52.2 79.2
N21 C20 H202 H201 117.8 118.3
H202 C20 N21 H21 173.5 205.2
C20 N21 H21 C22 231.5 232.5
H21 N21 C20 H201 292.1 323.4
H21 N21 C20 H202 173.5 205.2
H21 N21 C22 C23 270.5 192.8
H21 N21 C22 H221 31.3 313.5
H21 N21 C22 H222 149.7 72.2
N21 C22 H221 C23 234.8 237.5
H221 C22 N21 H21 31.3 313.5
N21 C22 H221 H222 117.4 118.8
H221 C22 C23 H231 175.7 214.3
H221 C22 C23 H232 57.2 93.6
C23 C22 H221 H222 242.6 241.2
N21 C22 H222 C23 125.2 122.4
H222 C22 N21 H21 149.7 72.2
N21 C22 H222 H221 242.6 241.2
H222 C22 C23 H231 57.4 95.6
H222 C22 C23 H232 298.9 334.8
C23 C22 H222 H221 117.4 118.8
N25 C26 H26 C27 180.0 179.8
H26 C26 C27 C28 358.3 0.0