PDB Chemical Component T3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for T3

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C3	1.433	1.382
C1	C11	1.446	1.383
C1	C13	1.557	1.507
C2	C4	1.374	1.387
C2	C12	1.412	1.388
C2	O2	1.448	1.359
C3	C5	1.397	1.381
C3	HC3	1.103	1.080
C4	C6	1.386	1.382
C4	HC4	1.104	1.079
C5	C7	1.428	1.387
C5	I1	2.116	2.095
C6	C8	1.457	1.387
C6	I2	2.011	2.095
C7	C9	1.381	1.388
C7	O2	1.363	1.357
C8	C10	1.371	1.386
C8	O1	1.364	1.359
C9	C11	1.397	1.381
C9	I3	2.034	2.095
C10	C12	1.423	1.381
C10	HC10	1.102	1.080
C11	HC11	1.103	1.080
C12	HC12	1.103	1.080
C13	CA	1.545	1.529
C13	H131	1.115	1.090
C13	H132	1.115	1.090
CA	C	1.508	1.507
CA	N	1.500	1.469
CA	HA	1.115	1.090
C	OXT	1.239	1.342
C	O	1.250	1.208
N	H2	1.020	1.009
N	H	1.020	1.008
O1	HO1	0.950	0.968
OXT	HXT	0.949	0.966

Bond Angles for T3

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C3	C1	C11	116.4	120.1
C3	C1	C13	120.8	120.0
C1	C3	C5	121.4	120.1
C1	C3	HC3	120.6	119.9
C11	C1	C13	122.6	119.9
C1	C11	C9	122.2	120.1
C1	C11	HC11	120.7	119.9
C1	C13	CA	117.9	109.5
C1	C13	H131	109.2	109.4
C1	C13	H132	109.2	109.5
C4	C2	C12	123.1	120.0
C4	C2	O2	116.1	120.0
C2	C4	C6	119.5	120.0
C2	C4	HC4	119.9	120.0
C12	C2	O2	120.8	120.0
C2	C12	C10	116.3	120.0
C2	C12	HC12	121.5	120.0
C2	O2	C7	123.1	106.8
C5	C3	HC3	118.0	120.0
C3	C5	C7	119.4	120.0
C3	C5	I1	118.4	120.0
C6	C4	HC4	120.7	120.1
C4	C6	C8	120.4	120.0
C4	C6	I2	120.5	120.0
C7	C5	I1	122.1	120.0
C5	C7	C9	121.2	119.8
C5	C7	O2	118.1	120.1
C8	C6	I2	118.8	120.0
C6	C8	C10	117.7	120.0
C6	C8	O1	118.2	120.0
C9	C7	O2	120.7	120.1
C7	C9	C11	119.4	119.9
C7	C9	I3	120.7	120.0
C10	C8	O1	124.1	120.0
C8	C10	C12	123.1	120.0
C8	C10	HC10	116.4	120.1
C8	O1	HO1	118.2	106.8
C11	C9	I3	119.9	120.0
C9	C11	HC11	117.1	120.0
C12	C10	HC10	120.5	119.9
C10	C12	HC12	122.2	120.0
CA	C13	H131	109.2	109.5
CA	C13	H132	109.2	109.5
C13	CA	C	115.3	109.5
C13	CA	N	112.9	109.5
C13	CA	HA	104.3	109.4
H131	C13	H132	101.0	109.4
C	CA	N	113.9	109.5
C	CA	HA	103.0	109.5
CA	C	OXT	116.5	120.0
CA	C	O	118.6	120.0
N	CA	HA	106.0	109.4
CA	N	H2	112.9	106.7
CA	N	H	111.0	106.7
OXT	C	O	124.8	120.0
C	OXT	HXT	116.5	120.0
H2	N	H	110.9	106.7

Torsion Angles for T3

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C11	C1	C3	C13	185.0	180.3
C3	C1	C11	C9	0.5	359.4
C3	C1	C11	HC11	180.5	179.9
C3	C1	C13	CA	121.3	90.0
C3	C1	C13	H131	246.6	330.0
C3	C1	C13	H132	356.1	210.1
C5	C3	C1	HC3	180.0	180.1
C1	C3	C5	C7	359.9	359.9
C1	C3	C5	I1	182.9	180.0
C3	C1	C11	C13	174.9	179.7
C11	C1	C3	C5	359.5	0.3
C11	C1	C3	HC3	179.5	180.3
C11	C1	C13	CA	296.0	269.7
C11	C1	C13	H131	61.2	149.6
C11	C1	C13	H132	170.7	29.8
C7	C9	C11	C1	0.1	0.5
C1	C11	C9	I3	180.4	180.2
C9	C11	C1	HC11	180.0	179.5
C3	C1	C13	C11	185.4	180.3
C13	C1	C3	C5	174.5	180.0
C13	C1	C3	HC3	354.5	359.9
C13	C1	C11	C9	185.6	179.8
C13	C1	C11	HC11	5.6	0.3
CA	C13	C1	H131	234.8	120.0
CA	C13	C1	H132	125.3	239.9
C1	C13	CA	C	197.0	180.0
C1	C13	CA	N	330.3	300.1
C1	C13	CA	HA	84.9	60.0
H131	C13	C1	H132	250.5	119.9
C12	C2	C4	O2	180.2	179.7
C4	C2	C12	C10	359.9	0.3
C4	C2	C12	HC12	179.9	180.2
C4	C2	O2	C7	203.8	359.7
C6	C4	C2	HC4	180.0	179.6
C2	C4	C6	C8	0.1	0.5
C2	C4	C6	I2	186.3	180.3
C4	C2	C12	O2	179.8	180.3
C12	C2	C4	C6	0.2	359.5
C12	C2	C4	HC4	180.2	179.9
C12	C2	O2	C7	23.7	180.0
C8	C10	C12	C2	359.8	0.0
C2	C12	C10	HC10	179.8	180.0
C10	C12	C2	HC12	180.0	180.0
C4	C2	O2	C12	180.2	179.7
O2	C2	C4	C6	180.0	179.8
O2	C2	C4	HC4	0.0	0.2
O2	C2	C12	C10	180.1	180.0
O2	C2	C12	HC12	0.1	359.9
C5	C7	O2	C2	84.0	90.1
C9	C7	O2	C2	264.3	270.0
C5	C3	C1	C11	359.5	0.3
C5	C3	C1	C13	174.5	180.0
C1	C3	C5	HC3	180.0	179.9
C7	C5	C3	I1	177.0	180.0
C3	C5	C7	C9	0.7	0.0
C3	C5	C7	O2	181.0	180.0
HC3	C3	C1	C11	179.5	180.3
HC3	C3	C1	C13	354.5	359.9
C1	C3	HC3	C5	180.0	180.1
HC3	C3	C5	C7	179.9	180.0
HC3	C3	C5	I1	2.9	0.1
C6	C4	C2	C12	0.2	359.5
C6	C4	C2	O2	180.0	179.8
C2	C4	C6	HC4	180.0	180.4
C8	C6	C4	I2	173.8	180.2
C4	C6	C8	C10	359.6	359.8
C4	C6	C8	O1	177.4	179.7
HC4	C4	C2	C12	180.2	179.9
HC4	C4	C2	O2	0.0	0.2
C2	C4	HC4	C6	180.0	179.6
HC4	C4	C6	C8	180.1	180.0
HC4	C4	C6	I2	6.3	359.9
C2	O2	C7	C5	84.0	90.1
C7	C5	C3	HC3	179.9	180.0
C3	C5	C7	I1	183.1	180.0
C9	C7	C5	O2	179.7	180.1
C5	C7	C9	C11	359.3	359.7
C5	C7	C9	I3	179.0	180.0
I1	C5	C3	HC3	2.9	0.1
C3	C5	I1	C7	176.9	180.0
I1	C5	C7	C9	177.6	180.0
I1	C5	C7	O2	357.9	359.9
C8	C6	C4	HC4	180.1	180.0
C4	C6	C8	I2	186.1	179.8
C10	C8	C6	O1	182.2	180.1
C6	C8	C10	C12	0.4	359.9
C6	C8	C10	HC10	180.4	180.0
C6	C8	O1	HO1	180.1	270.0
I2	C6	C4	HC4	6.3	359.9
C4	C6	I2	C8	173.9	180.2
I2	C6	C8	C10	173.5	180.0
I2	C6	C8	O1	351.2	359.9
C1	C11	C9	C7	0.1	0.5
C2	O2	C7	C9	264.3	270.0
C9	C7	C5	I1	177.6	180.0
C5	C7	C9	O2	180.3	179.9
C11	C9	C7	I3	180.3	179.7
C7	C9	C11	HC11	180.1	180.0
O2	C7	C5	I1	357.9	359.9
C5	C7	O2	C9	179.7	180.1
O2	C7	C9	C11	179.0	179.8
O2	C7	C9	I3	358.7	0.1
C2	C12	C10	C8	359.8	0.0
C10	C8	C6	I2	173.5	180.0
C6	C8	C10	O1	177.6	179.9
C10	C8	O1	HO1	357.6	90.0
C12	C10	C8	HC10	180.0	180.0
C8	C10	C12	HC12	179.8	180.1
O1	C8	C6	I2	351.2	359.9
C6	C8	O1	C10	182.4	180.1
O1	C8	C10	C12	182.8	180.0
O1	C8	C10	HC10	2.8	0.1
C9	C11	C1	C13	185.6	179.8
C1	C11	C9	HC11	180.0	180.5
C11	C9	C7	O2	179.0	179.8
C7	C9	C11	I3	179.7	180.3
I3	C9	C7	O2	358.7	0.1
C7	C9	I3	C11	180.3	179.7
I3	C9	C11	HC11	0.3	359.7
C10	C12	C2	O2	180.1	180.0
C2	C12	C10	HC12	180.0	180.0
C12	C10	C8	O1	182.8	180.0
C8	C10	C12	HC10	180.0	180.0
HC10	C10	C8	O1	2.8	0.1
C8	C10	HC10	C12	180.0	180.0
HC10	C10	C12	HC12	359.8	0.0
HC11	C11	C1	C13	5.6	0.3
C1	C11	HC11	C9	180.0	179.5
HC11	C11	C9	I3	0.3	359.7
HC12	C12	C2	O2	0.1	359.9
C2	C12	HC12	C10	180.0	180.0
HC12	C12	C10	HC10	359.8	0.0
C1	C13	CA	H131	125.2	240.0
C1	C13	CA	H132	234.7	120.1
H131	C13	CA	H132	109.5	240.1
C	CA	C13	N	226.7	239.9
C	CA	C13	HA	112.1	120.0
C13	CA	C	OXT	144.7	270.0
C13	CA	C	O	325.1	90.0
N	CA	C13	HA	245.4	240.1
C13	CA	N	H2	180.0	299.9
C13	CA	N	H	54.7	53.7
C1	C13	H131	CA	229.8	120.0
C1	C13	H131	H132	114.9	240.0
CA	C13	H131	H132	245.1	120.0
H131	C13	CA	C	71.8	300.0
H131	C13	CA	N	205.1	60.1
H131	C13	CA	HA	319.7	180.0
C1	C13	H132	CA	130.2	239.9
C1	C13	H132	H131	245.1	119.9
CA	C13	H132	H131	114.9	240.0
H132	C13	CA	C	322.3	60.0
H132	C13	CA	N	95.6	180.0
H132	C13	CA	HA	210.2	299.9
C	CA	C13	H131	71.8	300.0
C	CA	C13	H132	322.3	60.0
C13	CA	C	N	132.8	120.0
C13	CA	C	HA	247.1	240.0
N	CA	C	HA	114.3	120.0
C	CA	N	H2	313.9	60.0
C	CA	N	H	188.7	173.7
OXT	C	CA	O	179.7	180.0
CA	C	OXT	HXT	180.0	180.0
N	CA	C13	H131	205.1	60.1
N	CA	C13	H132	95.6	180.0
C13	CA	N	C	226.1	239.9
C13	CA	N	HA	113.6	119.9
C	CA	N	HA	247.5	240.0
N	CA	C	OXT	11.9	150.0
N	CA	C	O	192.3	330.0
H2	N	CA	H	125.3	246.3
HA	CA	C13	H131	319.7	180.0
HA	CA	C13	H132	210.2	299.9
C13	CA	HA	C	120.7	120.0
C13	CA	HA	N	240.6	240.1
C	CA	HA	N	119.9	120.0
HA	CA	C	OXT	257.6	30.0
HA	CA	C	O	78.0	210.0
HA	CA	N	H2	66.4	180.0
HA	CA	N	H	301.1	293.7
OXT	C	CA	N	11.9	150.0
OXT	C	CA	HA	257.6	30.0
CA	C	OXT	O	180.4	180.0
O	C	CA	N	192.3	330.0
O	C	CA	HA	78.0	210.0
CA	C	O	OXT	179.6	180.0
O	C	OXT	HXT	359.6	360.0
H2	N	CA	HA	66.4	180.0
CA	N	H2	H	234.7	113.8
H	N	CA	HA	301.1	293.7
CA	N	H	H2	126.4	246.3
HXT	OXT	C	O	359.6	360.0