PDB Chemical Component T1J
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for T1J
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C02 |
O01 |
1.399 |
1.359 |
| C03 |
C02 |
1.388 |
1.387 |
| C04 |
C03 |
1.386 |
1.381 |
| C05 |
C04 |
1.391 |
1.382 |
| C06 |
C05 |
1.390 |
1.384 |
| C07 |
C06 |
1.391 |
1.380 |
| C08 |
C07 |
1.520 |
1.508 |
| N09 |
C08 |
1.451 |
1.465 |
| C10 |
N09 |
1.452 |
1.379 |
| N11 |
C10 |
1.332 |
1.310 |
| C12 |
N11 |
1.363 |
1.360 |
| C13 |
C12 |
1.429 |
1.396 |
| C14 |
C13 |
1.393 |
1.378 |
| C15 |
C14 |
1.399 |
1.387 |
| C16 |
C15 |
1.391 |
1.380 |
| C17 |
C16 |
1.426 |
1.387 |
| N18 |
C17 |
1.358 |
1.385 |
| C02 |
C07 |
1.387 |
1.388 |
| C10 |
N18 |
1.333 |
1.365 |
| C12 |
C17 |
1.363 |
1.405 |
| C13 |
H131 |
1.080 |
1.080 |
| C15 |
H151 |
1.080 |
1.080 |
| C03 |
H031 |
1.080 |
1.080 |
| C04 |
H041 |
1.079 |
1.080 |
| C05 |
H051 |
1.080 |
1.080 |
| C06 |
H061 |
1.080 |
1.080 |
| C08 |
H081 |
1.100 |
1.090 |
| C08 |
H082 |
1.100 |
1.090 |
| C14 |
H141 |
1.080 |
1.080 |
| C16 |
H161 |
1.080 |
1.080 |
| N09 |
H091 |
1.000 |
0.970 |
| N18 |
H181 |
1.000 |
0.970 |
| O01 |
H011 |
0.950 |
0.966 |
Bond Angles for T1J
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C03 |
C02 |
O01 |
120.6 |
120.1 |
| C07 |
C02 |
O01 |
119.4 |
120.1 |
| C02 |
O01 |
H011 |
109.5 |
114.0 |
| C03 |
C02 |
C07 |
120.0 |
119.9 |
| C04 |
C03 |
H031 |
120.3 |
120.0 |
| C05 |
C04 |
H041 |
119.7 |
120.0 |
| C06 |
C05 |
H051 |
120.0 |
119.9 |
| C02 |
C07 |
C06 |
120.6 |
120.0 |
| C07 |
C06 |
H061 |
120.4 |
120.0 |
| C10 |
N09 |
C08 |
118.6 |
120.0 |
| N09 |
C08 |
H081 |
109.2 |
109.5 |
| N09 |
C08 |
H082 |
109.1 |
109.5 |
| N09 |
C10 |
N18 |
127.6 |
125.1 |
| C10 |
N09 |
H091 |
107.1 |
120.0 |
| N11 |
C10 |
N18 |
108.0 |
109.9 |
| C13 |
C12 |
N11 |
132.8 |
133.4 |
| C13 |
C12 |
C17 |
120.0 |
119.6 |
| C12 |
C13 |
H131 |
120.1 |
120.2 |
| C14 |
C13 |
H131 |
120.1 |
120.1 |
| C14 |
C15 |
H151 |
120.0 |
119.8 |
| C15 |
C14 |
H141 |
119.9 |
119.7 |
| C16 |
C15 |
H151 |
120.1 |
119.8 |
| C12 |
C17 |
C16 |
120.1 |
119.9 |
| C17 |
C16 |
H161 |
119.9 |
120.0 |
| C10 |
N18 |
C17 |
109.3 |
107.3 |
| C10 |
N18 |
H181 |
125.3 |
126.4 |
| H081 |
C08 |
H082 |
109.5 |
109.4 |
Torsion Angles for T1J
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C03 |
C02 |
O01 |
C07 |
180.6 |
180.3 |
| O01 |
C02 |
C07 |
C06 |
179.9 |
179.8 |
| C07 |
C02 |
C03 |
O01 |
180.6 |
180.3 |
| C03 |
C02 |
O01 |
H011 |
180.0 |
270.3 |
| C03 |
C02 |
C07 |
C06 |
359.3 |
359.5 |
| C04 |
C03 |
C02 |
O01 |
180.2 |
180.0 |
| C04 |
C03 |
C02 |
C07 |
0.9 |
0.3 |
| C05 |
C04 |
C03 |
H031 |
179.2 |
180.0 |
| C06 |
C05 |
C04 |
H041 |
180.5 |
180.0 |
| C02 |
C07 |
C06 |
C05 |
0.4 |
0.5 |
| C06 |
C07 |
C02 |
O01 |
179.9 |
179.8 |
| C07 |
C06 |
C05 |
H051 |
179.7 |
179.8 |
| C08 |
C07 |
C02 |
O01 |
0.7 |
0.0 |
| C08 |
C07 |
C06 |
H061 |
359.6 |
0.0 |
| C10 |
N09 |
C08 |
C07 |
169.9 |
179.9 |
| C08 |
N09 |
C10 |
N18 |
188.3 |
0.1 |
| C10 |
N09 |
C08 |
H091 |
238.7 |
179.9 |
| H081 |
C08 |
N09 |
H082 |
119.6 |
120.0 |
| C10 |
N09 |
C08 |
H081 |
49.7 |
59.9 |
| C10 |
N09 |
C08 |
H082 |
290.0 |
299.9 |
| N11 |
C10 |
N09 |
N18 |
180.1 |
180.2 |
| N09 |
C10 |
N18 |
C17 |
180.0 |
180.0 |
| N09 |
C10 |
N18 |
H181 |
359.9 |
359.9 |
| N09 |
C10 |
N11 |
N18 |
179.9 |
179.8 |
| N11 |
C10 |
N09 |
H091 |
247.1 |
0.2 |
| N11 |
C10 |
N18 |
C17 |
359.9 |
359.8 |
| N11 |
C10 |
N18 |
H181 |
179.9 |
179.7 |
| C12 |
N11 |
C10 |
N18 |
0.1 |
0.2 |
| C13 |
C12 |
N11 |
C17 |
180.1 |
180.1 |
| N11 |
C12 |
C13 |
H131 |
359.8 |
360.0 |
| N11 |
C12 |
C17 |
C16 |
179.8 |
180.0 |
| C14 |
C13 |
C12 |
H131 |
180.0 |
180.1 |
| C13 |
C12 |
C17 |
C16 |
359.7 |
359.9 |
| C14 |
C13 |
C12 |
N11 |
179.8 |
180.0 |
| C12 |
C13 |
C14 |
H131 |
180.0 |
179.9 |
| C15 |
C14 |
C13 |
H131 |
180.4 |
180.0 |
| C16 |
C15 |
C14 |
H151 |
180.0 |
179.9 |
| C14 |
C15 |
C16 |
H151 |
180.0 |
180.1 |
| C16 |
C15 |
C14 |
H141 |
179.8 |
180.0 |
| C17 |
C16 |
C15 |
H151 |
179.7 |
180.0 |
| C10 |
N18 |
C17 |
C16 |
180.4 |
180.1 |
| N18 |
C17 |
C16 |
H161 |
0.1 |
0.0 |
| C10 |
N18 |
C17 |
H181 |
180.0 |
179.9 |
| C03 |
C02 |
C07 |
O01 |
179.4 |
179.7 |
| C07 |
C02 |
O01 |
H011 |
359.4 |
90.0 |
| C02 |
C07 |
C06 |
H061 |
180.4 |
180.3 |
| N18 |
C10 |
N09 |
C08 |
188.3 |
0.1 |
| N18 |
C10 |
N09 |
H091 |
67.0 |
180.0 |
| C13 |
C12 |
C17 |
N11 |
179.9 |
179.9 |
| C17 |
C12 |
C13 |
H131 |
179.9 |
180.1 |
| C12 |
C17 |
C16 |
H161 |
180.5 |
180.0 |
| C10 |
N18 |
C17 |
C12 |
0.0 |
0.1 |
| H131 |
C13 |
C12 |
N11 |
359.8 |
360.0 |
| H131 |
C13 |
C12 |
C17 |
179.9 |
180.1 |
| H151 |
C15 |
C14 |
H141 |
359.8 |
0.1 |
| H031 |
C03 |
C02 |
O01 |
0.2 |
360.0 |
| H031 |
C03 |
C02 |
C07 |
180.8 |
180.3 |
| H041 |
C04 |
C03 |
H031 |
359.2 |
0.0 |
| H051 |
C05 |
C04 |
H041 |
0.5 |
360.0 |
| H061 |
C06 |
C05 |
H051 |
359.7 |
360.0 |
| N09 |
C08 |
H081 |
H082 |
240.6 |
239.9 |
| N09 |
C08 |
H082 |
H081 |
119.4 |
120.1 |
| H141 |
C14 |
C13 |
H131 |
0.4 |
360.0 |
| H141 |
C14 |
C15 |
H151 |
359.8 |
0.1 |
| H161 |
C16 |
C15 |
H151 |
359.7 |
360.0 |
| C10 |
N09 |
H091 |
C08 |
128.3 |
180.1 |
| H091 |
N09 |
C08 |
H081 |
170.9 |
240.1 |
| H091 |
N09 |
C08 |
H082 |
51.3 |
120.0 |
| H091 |
N09 |
C10 |
N18 |
67.0 |
180.0 |
| C10 |
N18 |
H181 |
C17 |
180.0 |
180.1 |