PDB Chemical Component T0J
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for T0J
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C02 |
N01 |
1.458 |
1.348 |
O03 |
C02 |
1.181 |
1.213 |
C04 |
C02 |
1.536 |
1.507 |
C05 |
C04 |
1.480 |
1.530 |
C06 |
C05 |
1.533 |
1.532 |
N07 |
C06 |
1.521 |
1.469 |
C09 |
C08 |
1.519 |
1.532 |
C08 |
N07 |
1.500 |
1.469 |
C10 |
N07 |
1.463 |
1.347 |
O11 |
C10 |
1.189 |
1.216 |
N12 |
C10 |
1.449 |
1.348 |
C13 |
N12 |
1.445 |
1.400 |
C14 |
C13 |
1.382 |
1.389 |
C15 |
C14 |
1.388 |
1.381 |
C16 |
C15 |
1.391 |
1.383 |
C17 |
C16 |
1.390 |
1.383 |
C18 |
C17 |
1.386 |
1.381 |
C04 |
C09 |
1.467 |
1.530 |
C13 |
C18 |
1.391 |
1.389 |
N12 |
H121 |
1.000 |
0.969 |
C15 |
H151 |
1.080 |
1.080 |
C17 |
H171 |
1.080 |
1.079 |
C04 |
H041 |
1.099 |
1.091 |
C05 |
H052 |
1.100 |
1.090 |
C05 |
H051 |
1.100 |
1.090 |
C06 |
H062 |
1.100 |
1.090 |
C06 |
H061 |
1.100 |
1.090 |
C08 |
H081 |
1.100 |
1.090 |
C08 |
H082 |
1.100 |
1.090 |
C09 |
H092 |
1.100 |
1.089 |
C09 |
H091 |
1.100 |
1.090 |
C14 |
H141 |
1.080 |
1.080 |
C16 |
H161 |
1.080 |
1.081 |
C18 |
H181 |
1.080 |
1.079 |
N01 |
H012 |
1.000 |
0.971 |
N01 |
H011 |
1.000 |
0.969 |
Bond Angles for T0J
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C04 |
C02 |
N01 |
123.8 |
120.0 |
C02 |
N01 |
H012 |
120.0 |
120.0 |
C02 |
N01 |
H011 |
120.0 |
120.0 |
C05 |
C04 |
C09 |
107.1 |
109.6 |
C05 |
C04 |
H041 |
107.2 |
109.4 |
C06 |
C05 |
H052 |
109.1 |
109.5 |
C06 |
C05 |
H051 |
109.1 |
109.5 |
C10 |
N07 |
C06 |
126.0 |
120.6 |
N07 |
C06 |
H062 |
107.3 |
109.6 |
N07 |
C06 |
H061 |
107.3 |
109.7 |
C09 |
C08 |
N07 |
115.8 |
108.8 |
C04 |
C09 |
C08 |
105.6 |
109.3 |
C09 |
C08 |
H081 |
107.9 |
109.6 |
C09 |
C08 |
H082 |
107.8 |
109.7 |
C10 |
N07 |
C08 |
117.6 |
120.6 |
N07 |
C08 |
H081 |
107.9 |
109.6 |
N07 |
C08 |
H082 |
107.9 |
109.6 |
N12 |
C10 |
N07 |
121.4 |
120.0 |
C13 |
N12 |
H121 |
119.3 |
120.0 |
C14 |
C13 |
C18 |
120.3 |
119.9 |
C14 |
C15 |
H151 |
120.1 |
119.9 |
C15 |
C14 |
H141 |
120.0 |
120.1 |
C16 |
C15 |
H151 |
120.0 |
120.0 |
C16 |
C17 |
H171 |
120.0 |
120.0 |
C17 |
C16 |
H161 |
119.9 |
119.9 |
C13 |
C18 |
C17 |
119.8 |
119.9 |
C18 |
C17 |
H171 |
120.1 |
120.0 |
C09 |
C04 |
H041 |
107.4 |
109.5 |
C04 |
C09 |
H092 |
110.4 |
109.5 |
C04 |
C09 |
H091 |
110.4 |
109.5 |
C13 |
C18 |
H181 |
120.1 |
120.0 |
H052 |
C05 |
H051 |
109.5 |
109.5 |
H062 |
C06 |
H061 |
109.5 |
109.5 |
H081 |
C08 |
H082 |
109.4 |
109.5 |
H092 |
C09 |
H091 |
109.5 |
109.5 |
H012 |
N01 |
H011 |
120.0 |
120.0 |
Torsion Angles for T0J
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H012 |
N01 |
C02 |
H011 |
180.1 |
180.1 |
O03 |
C02 |
N01 |
H012 |
0.0 |
180.0 |
O03 |
C02 |
N01 |
H011 |
180.0 |
359.9 |
C04 |
C02 |
N01 |
H012 |
177.9 |
0.0 |
C04 |
C02 |
N01 |
H011 |
357.8 |
180.0 |
C05 |
C04 |
C02 |
N01 |
117.1 |
300.1 |
C05 |
C04 |
C09 |
C08 |
75.6 |
61.3 |
C09 |
C04 |
C05 |
H041 |
245.0 |
240.0 |
C05 |
C04 |
C09 |
H092 |
316.2 |
181.3 |
C05 |
C04 |
C09 |
H091 |
194.9 |
301.4 |
C06 |
C05 |
C04 |
C09 |
296.6 |
298.6 |
C06 |
C05 |
C04 |
H041 |
51.6 |
58.7 |
C10 |
N07 |
C06 |
C05 |
174.1 |
126.3 |
H052 |
C05 |
C06 |
H051 |
119.5 |
120.1 |
N07 |
C06 |
C05 |
H052 |
268.0 |
294.7 |
N07 |
C06 |
C05 |
H051 |
148.5 |
174.6 |
C10 |
N07 |
C06 |
C08 |
181.1 |
179.9 |
N12 |
C10 |
N07 |
C06 |
358.5 |
355.0 |
H062 |
C06 |
N07 |
H061 |
117.6 |
120.3 |
C10 |
N07 |
C08 |
C09 |
198.8 |
233.6 |
N07 |
C08 |
C09 |
H081 |
239.0 |
240.2 |
N07 |
C08 |
C09 |
H082 |
120.9 |
119.9 |
C08 |
C09 |
C04 |
H041 |
320.7 |
301.3 |
C04 |
C09 |
C08 |
H092 |
240.6 |
120.0 |
C04 |
C09 |
C08 |
H091 |
119.4 |
240.1 |
H081 |
C08 |
C09 |
H082 |
241.9 |
239.7 |
C10 |
N07 |
C08 |
C06 |
179.0 |
180.1 |
C08 |
N07 |
C06 |
H062 |
231.8 |
186.6 |
C08 |
N07 |
C06 |
H061 |
114.2 |
66.3 |
C04 |
C09 |
C08 |
N07 |
306.8 |
305.4 |
C09 |
C08 |
N07 |
H081 |
121.0 |
119.8 |
C09 |
C08 |
N07 |
H082 |
239.1 |
240.1 |
N12 |
C10 |
N07 |
C08 |
179.6 |
174.9 |
H081 |
C08 |
N07 |
H082 |
118.1 |
120.2 |
C10 |
N07 |
C06 |
H062 |
52.9 |
6.5 |
C10 |
N07 |
C06 |
H061 |
295.3 |
246.2 |
C09 |
C08 |
N07 |
C10 |
198.8 |
233.6 |
C10 |
N07 |
C08 |
H081 |
77.8 |
113.8 |
C10 |
N07 |
C08 |
H082 |
319.7 |
353.6 |
C13 |
N12 |
C10 |
N07 |
180.4 |
185.7 |
C14 |
C13 |
N12 |
H121 |
303.0 |
213.2 |
C14 |
C13 |
C18 |
C17 |
359.9 |
359.7 |
C14 |
C13 |
C18 |
H181 |
180.0 |
179.7 |
C15 |
C14 |
C13 |
C18 |
0.1 |
0.3 |
C16 |
C15 |
C14 |
H151 |
180.0 |
180.0 |
C14 |
C15 |
C16 |
H151 |
180.0 |
180.0 |
C16 |
C15 |
C14 |
H141 |
179.9 |
180.0 |
C17 |
C16 |
C15 |
H151 |
180.1 |
179.8 |
C13 |
C18 |
C17 |
C16 |
0.0 |
0.0 |
C18 |
C17 |
C16 |
H171 |
180.0 |
180.2 |
C16 |
C17 |
C18 |
H171 |
180.0 |
179.8 |
C18 |
C17 |
C16 |
H161 |
180.0 |
180.3 |
C13 |
C18 |
C17 |
H181 |
180.0 |
180.0 |
C09 |
C04 |
C02 |
N01 |
353.5 |
180.0 |
C05 |
C04 |
C09 |
H041 |
114.9 |
120.0 |
C04 |
C09 |
C08 |
H081 |
67.7 |
65.2 |
C04 |
C09 |
C08 |
H082 |
185.9 |
185.5 |
H092 |
C09 |
C04 |
H091 |
121.2 |
239.9 |
C18 |
C13 |
N12 |
H121 |
122.4 |
32.9 |
C13 |
C18 |
C17 |
H171 |
180.0 |
180.2 |
H121 |
N12 |
C10 |
N07 |
0.4 |
5.7 |
H151 |
C15 |
C14 |
H141 |
359.9 |
360.0 |
H171 |
C17 |
C16 |
H161 |
0.0 |
0.0 |
H041 |
C04 |
C02 |
N01 |
235.4 |
60.0 |
C05 |
C04 |
H041 |
C09 |
245.2 |
239.9 |
H041 |
C04 |
C09 |
C08 |
320.7 |
301.3 |
H041 |
C04 |
C09 |
H092 |
201.3 |
61.3 |
H041 |
C04 |
C09 |
H091 |
80.0 |
181.4 |
H052 |
C05 |
C04 |
C09 |
56.8 |
58.6 |
H052 |
C05 |
C04 |
H041 |
171.8 |
178.6 |
C06 |
C05 |
H052 |
H051 |
240.7 |
239.9 |
H051 |
C05 |
C04 |
C09 |
176.4 |
178.7 |
H051 |
C05 |
C04 |
H041 |
291.4 |
298.7 |
C06 |
C05 |
H051 |
H052 |
119.3 |
120.1 |
H062 |
C06 |
C05 |
H052 |
29.2 |
54.5 |
H062 |
C06 |
C05 |
H051 |
269.6 |
294.4 |
N07 |
C06 |
H062 |
H061 |
243.8 |
239.6 |
H061 |
C06 |
C05 |
H052 |
146.8 |
174.7 |
H061 |
C06 |
C05 |
H051 |
27.3 |
54.6 |
N07 |
C06 |
H061 |
H062 |
116.2 |
120.3 |
C09 |
C08 |
H081 |
N07 |
234.2 |
240.7 |
C09 |
C08 |
H081 |
H082 |
117.1 |
120.4 |
N07 |
C08 |
H081 |
H082 |
242.9 |
239.7 |
C09 |
C08 |
H082 |
N07 |
125.8 |
119.4 |
C09 |
C08 |
H082 |
H081 |
242.9 |
239.7 |
N07 |
C08 |
H082 |
H081 |
117.1 |
120.3 |
H092 |
C09 |
C08 |
N07 |
66.2 |
185.4 |
C04 |
C09 |
H092 |
C08 |
116.4 |
240.1 |
H092 |
C09 |
C08 |
H081 |
187.1 |
305.2 |
H092 |
C09 |
C08 |
H082 |
305.2 |
65.5 |
H092 |
C09 |
C04 |
H041 |
201.3 |
61.3 |
C04 |
C09 |
H092 |
H091 |
238.2 |
120.1 |
H091 |
C09 |
C08 |
N07 |
187.4 |
65.3 |
C04 |
C09 |
H091 |
C08 |
243.6 |
119.8 |
H091 |
C09 |
C08 |
H081 |
308.4 |
185.2 |
H091 |
C09 |
C08 |
H082 |
66.5 |
305.4 |
H091 |
C09 |
C04 |
H041 |
80.0 |
181.4 |
C04 |
C09 |
H091 |
H092 |
121.8 |
239.9 |
H141 |
C14 |
C13 |
C18 |
180.1 |
180.3 |
H141 |
C14 |
C15 |
H151 |
359.9 |
360.0 |
H161 |
C16 |
C15 |
H151 |
0.0 |
359.7 |
H161 |
C16 |
C17 |
H171 |
0.0 |
0.0 |
C13 |
C18 |
H181 |
C17 |
180.0 |
180.0 |
H181 |
C18 |
C17 |
H171 |
360.0 |
0.2 |
C02 |
N01 |
H012 |
H011 |
179.9 |
179.9 |
C02 |
N01 |
H011 |
H012 |
180.1 |
180.1 |