PDB Chemical Component T0J

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for T0J

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C02 N01 1.458 1.348
O03 C02 1.181 1.213
C04 C02 1.536 1.507
C05 C04 1.480 1.530
C06 C05 1.533 1.532
N07 C06 1.521 1.469
C09 C08 1.519 1.532
C08 N07 1.500 1.469
C10 N07 1.463 1.347
O11 C10 1.189 1.216
N12 C10 1.449 1.348
C13 N12 1.445 1.400
C14 C13 1.382 1.389
C15 C14 1.388 1.381
C16 C15 1.391 1.383
C17 C16 1.390 1.383
C18 C17 1.386 1.381
C04 C09 1.467 1.530
C13 C18 1.391 1.389
N12 H121 1.000 0.969
C15 H151 1.080 1.080
C17 H171 1.080 1.079
C04 H041 1.099 1.091
C05 H052 1.100 1.090
C05 H051 1.100 1.090
C06 H062 1.100 1.090
C06 H061 1.100 1.090
C08 H081 1.100 1.090
C08 H082 1.100 1.090
C09 H092 1.100 1.089
C09 H091 1.100 1.090
C14 H141 1.080 1.080
C16 H161 1.080 1.081
C18 H181 1.080 1.079
N01 H012 1.000 0.971
N01 H011 1.000 0.969

Bond Angles for T0J

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C04 C02 N01 123.8 120.0
C02 N01 H012 120.0 120.0
C02 N01 H011 120.0 120.0
C05 C04 C09 107.1 109.6
C05 C04 H041 107.2 109.4
C06 C05 H052 109.1 109.5
C06 C05 H051 109.1 109.5
C10 N07 C06 126.0 120.6
N07 C06 H062 107.3 109.6
N07 C06 H061 107.3 109.7
C09 C08 N07 115.8 108.8
C04 C09 C08 105.6 109.3
C09 C08 H081 107.9 109.6
C09 C08 H082 107.8 109.7
C10 N07 C08 117.6 120.6
N07 C08 H081 107.9 109.6
N07 C08 H082 107.9 109.6
N12 C10 N07 121.4 120.0
C13 N12 H121 119.3 120.0
C14 C13 C18 120.3 119.9
C14 C15 H151 120.1 119.9
C15 C14 H141 120.0 120.1
C16 C15 H151 120.0 120.0
C16 C17 H171 120.0 120.0
C17 C16 H161 119.9 119.9
C13 C18 C17 119.8 119.9
C18 C17 H171 120.1 120.0
C09 C04 H041 107.4 109.5
C04 C09 H092 110.4 109.5
C04 C09 H091 110.4 109.5
C13 C18 H181 120.1 120.0
H052 C05 H051 109.5 109.5
H062 C06 H061 109.5 109.5
H081 C08 H082 109.4 109.5
H092 C09 H091 109.5 109.5
H012 N01 H011 120.0 120.0

Torsion Angles for T0J

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H012 N01 C02 H011 180.1 180.1
O03 C02 N01 H012 0.0 180.0
O03 C02 N01 H011 180.0 359.9
C04 C02 N01 H012 177.9 0.0
C04 C02 N01 H011 357.8 180.0
C05 C04 C02 N01 117.1 300.1
C05 C04 C09 C08 75.6 61.3
C09 C04 C05 H041 245.0 240.0
C05 C04 C09 H092 316.2 181.3
C05 C04 C09 H091 194.9 301.4
C06 C05 C04 C09 296.6 298.6
C06 C05 C04 H041 51.6 58.7
C10 N07 C06 C05 174.1 126.3
H052 C05 C06 H051 119.5 120.1
N07 C06 C05 H052 268.0 294.7
N07 C06 C05 H051 148.5 174.6
C10 N07 C06 C08 181.1 179.9
N12 C10 N07 C06 358.5 355.0
H062 C06 N07 H061 117.6 120.3
C10 N07 C08 C09 198.8 233.6
N07 C08 C09 H081 239.0 240.2
N07 C08 C09 H082 120.9 119.9
C08 C09 C04 H041 320.7 301.3
C04 C09 C08 H092 240.6 120.0
C04 C09 C08 H091 119.4 240.1
H081 C08 C09 H082 241.9 239.7
C10 N07 C08 C06 179.0 180.1
C08 N07 C06 H062 231.8 186.6
C08 N07 C06 H061 114.2 66.3
C04 C09 C08 N07 306.8 305.4
C09 C08 N07 H081 121.0 119.8
C09 C08 N07 H082 239.1 240.1
N12 C10 N07 C08 179.6 174.9
H081 C08 N07 H082 118.1 120.2
C10 N07 C06 H062 52.9 6.5
C10 N07 C06 H061 295.3 246.2
C09 C08 N07 C10 198.8 233.6
C10 N07 C08 H081 77.8 113.8
C10 N07 C08 H082 319.7 353.6
C13 N12 C10 N07 180.4 185.7
C14 C13 N12 H121 303.0 213.2
C14 C13 C18 C17 359.9 359.7
C14 C13 C18 H181 180.0 179.7
C15 C14 C13 C18 0.1 0.3
C16 C15 C14 H151 180.0 180.0
C14 C15 C16 H151 180.0 180.0
C16 C15 C14 H141 179.9 180.0
C17 C16 C15 H151 180.1 179.8
C13 C18 C17 C16 0.0 0.0
C18 C17 C16 H171 180.0 180.2
C16 C17 C18 H171 180.0 179.8
C18 C17 C16 H161 180.0 180.3
C13 C18 C17 H181 180.0 180.0
C09 C04 C02 N01 353.5 180.0
C05 C04 C09 H041 114.9 120.0
C04 C09 C08 H081 67.7 65.2
C04 C09 C08 H082 185.9 185.5
H092 C09 C04 H091 121.2 239.9
C18 C13 N12 H121 122.4 32.9
C13 C18 C17 H171 180.0 180.2
H121 N12 C10 N07 0.4 5.7
H151 C15 C14 H141 359.9 360.0
H171 C17 C16 H161 0.0 0.0
H041 C04 C02 N01 235.4 60.0
C05 C04 H041 C09 245.2 239.9
H041 C04 C09 C08 320.7 301.3
H041 C04 C09 H092 201.3 61.3
H041 C04 C09 H091 80.0 181.4
H052 C05 C04 C09 56.8 58.6
H052 C05 C04 H041 171.8 178.6
C06 C05 H052 H051 240.7 239.9
H051 C05 C04 C09 176.4 178.7
H051 C05 C04 H041 291.4 298.7
C06 C05 H051 H052 119.3 120.1
H062 C06 C05 H052 29.2 54.5
H062 C06 C05 H051 269.6 294.4
N07 C06 H062 H061 243.8 239.6
H061 C06 C05 H052 146.8 174.7
H061 C06 C05 H051 27.3 54.6
N07 C06 H061 H062 116.2 120.3
C09 C08 H081 N07 234.2 240.7
C09 C08 H081 H082 117.1 120.4
N07 C08 H081 H082 242.9 239.7
C09 C08 H082 N07 125.8 119.4
C09 C08 H082 H081 242.9 239.7
N07 C08 H082 H081 117.1 120.3
H092 C09 C08 N07 66.2 185.4
C04 C09 H092 C08 116.4 240.1
H092 C09 C08 H081 187.1 305.2
H092 C09 C08 H082 305.2 65.5
H092 C09 C04 H041 201.3 61.3
C04 C09 H092 H091 238.2 120.1
H091 C09 C08 N07 187.4 65.3
C04 C09 H091 C08 243.6 119.8
H091 C09 C08 H081 308.4 185.2
H091 C09 C08 H082 66.5 305.4
H091 C09 C04 H041 80.0 181.4
C04 C09 H091 H092 121.8 239.9
H141 C14 C13 C18 180.1 180.3
H141 C14 C15 H151 359.9 360.0
H161 C16 C15 H151 0.0 359.7
H161 C16 C17 H171 0.0 0.0
C13 C18 H181 C17 180.0 180.0
H181 C18 C17 H171 360.0 0.2
C02 N01 H012 H011 179.9 179.9
C02 N01 H011 H012 180.1 180.1