PDB Chemical Component T07

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for T07

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
S C4 1.810 1.814
S C9 1.759 1.762
C1 CL2 1.744 1.736
C1 C5 1.392 1.383
C1 C7 1.344 1.384
N1 C8 1.352 1.365
N1 C9 1.350 1.367
CL1 C2 1.801 1.735
C2 C3 1.347 1.384
C2 C5 1.397 1.384
N2 N4 1.407 1.401
N2 C8 1.325 1.311
C3 C4 1.522 1.508
C3 C6 1.401 1.382
N3 C8 1.374 1.390
N4 C9 1.336 1.312
C6 C7 1.354 1.382
N1 HN1 1.000 0.971
N3 HN3 1.000 0.970
N3 HN3A 1.000 0.969
C4 H4 1.100 1.090
C4 H4A 1.100 1.089
C5 H5 1.080 1.080
C6 H6 1.080 1.080
C7 H7 1.080 1.081

Bond Angles for T07

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C4 S C9 95.8 103.0
S C4 C3 117.6 109.5
S C4 H4 106.9 109.5
S C4 H4A 106.8 109.5
S C9 N1 123.2 126.1
S C9 N4 122.3 126.0
CL2 C1 C5 115.0 120.0
CL2 C1 C7 122.8 120.0
C5 C1 C7 121.7 119.9
C1 C5 C2 114.3 120.0
C1 C5 H5 122.8 120.0
C1 C7 C6 122.2 120.1
C1 C7 H7 118.9 120.0
C8 N1 C9 104.2 108.1
N1 C8 N2 109.5 108.0
N1 C8 N3 126.3 126.0
C8 N1 HN1 127.9 126.0
N1 C9 N4 114.5 107.9
C9 N1 HN1 127.9 125.9
CL1 C2 C3 120.7 120.0
CL1 C2 C5 114.9 120.0
C3 C2 C5 124.2 119.9
C2 C3 C4 119.8 120.0
C2 C3 C6 118.5 120.1
C2 C5 H5 122.8 120.0
N4 N2 C8 110.0 108.0
N2 N4 C9 101.7 108.0
N2 C8 N3 124.2 125.9
C4 C3 C6 121.7 120.0
C3 C4 H4 106.8 109.5
C3 C4 H4A 106.9 109.5
C3 C6 C7 118.1 120.0
C3 C6 H6 121.0 120.0
C8 N3 HN3 109.5 119.9
C8 N3 HN3A 109.5 120.0
C7 C6 H6 120.9 120.0
C6 C7 H7 118.9 119.9
HN3 N3 HN3A 109.5 120.1
H4 C4 H4A 111.9 109.5

Torsion Angles for T07

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4 S C9 N1 317.5 180.0
C4 S C9 N4 137.9 360.0
C2 C3 C4 S 145.8 90.0
S C4 C3 C6 327.5 270.3
C3 C4 S H4 240.0 240.0
C3 C4 S H4A 120.0 120.0
H4 C4 S H4A 240.0 240.0
C9 S C4 C3 290.7 180.0
C9 S C4 H4 50.7 300.0
C9 S C4 H4A 170.7 60.0
C8 N1 C9 S 177.6 179.9
N1 C9 S N4 179.6 180.0
S C9 N1 HN1 357.6 0.2
N2 N4 C9 S 182.3 180.1
C5 C1 CL2 C7 188.1 180.3
CL2 C1 C5 C2 181.8 180.0
CL2 C1 C5 H5 1.8 359.9
CL2 C1 C7 C6 180.1 180.0
CL2 C1 C7 H7 0.1 0.1
CL2 C1 C5 C7 172.0 179.7
C5 C1 C7 C6 351.5 359.7
C5 C1 C7 H7 171.5 179.7
CL1 C2 C5 C1 181.3 180.0
C3 C2 C5 C1 356.9 360.0
C2 C5 C1 H5 180.0 180.1
CL2 C1 C7 C5 188.6 180.3
C7 C1 C5 C2 9.7 0.3
C7 C1 C5 H5 189.7 180.3
C3 C6 C7 C1 360.0 0.0
C1 C7 C6 H6 179.9 180.3
C6 C7 C1 H7 180.0 179.9
S C9 N1 C8 177.6 179.9
C8 N1 C9 N4 357.3 359.9
C9 N1 C8 HN1 180.0 180.3
N4 N2 C8 N1 0.0 0.0
N2 C8 N1 N3 181.0 180.0
N1 C8 N3 HN3 181.2 0.0
N1 C8 N3 HN3A 301.2 180.1
S C9 N1 N4 180.3 180.0
C9 N1 C8 N2 1.5 0.0
C9 N1 C8 N3 180.5 180.0
C8 N1 C9 HN1 180.0 179.7
N2 N4 C9 N1 2.6 0.1
C1 C5 C2 CL1 181.3 180.0
C3 C2 CL1 C5 184.2 180.0
CL1 C2 C3 C4 352.2 0.0
CL1 C2 C3 C6 170.6 179.7
CL1 C2 C5 H5 1.2 0.1
S C4 C3 C2 145.8 90.0
C1 C5 C2 C3 356.9 360.0
CL1 C2 C3 C5 175.4 180.0
C3 C2 C5 H5 176.9 180.1
C4 C3 C2 C6 181.6 180.3
C2 C3 C4 H4 25.8 330.0
C2 C3 C4 H4A 265.8 210.0
C2 C3 C6 C7 6.4 0.3
C2 C3 C6 H6 186.5 180.0
C2 C5 C1 C7 9.7 0.3
C1 C5 C2 H5 180.0 179.9
CL1 C2 C5 C3 184.4 180.0
C5 C2 C3 C4 176.8 180.0
C5 C2 C3 C6 355.2 359.7
S C9 N4 N2 182.3 180.1
N1 C8 N2 N4 0.0 0.0
N1 C9 N4 N2 2.6 0.1
N4 N2 C8 N3 181.0 180.0
N2 C8 N1 C9 1.5 0.0
N1 C8 N2 N3 179.0 180.0
N2 C8 N1 HN1 181.6 179.7
C8 N2 N4 C9 358.5 360.0
N2 C8 N3 HN3 360.0 180.0
N2 C8 N3 HN3A 120.0 0.0
C3 C4 S C9 290.7 180.0
S C4 C3 H4 120.0 120.0
S C4 C3 H4A 240.0 240.0
C4 C3 C2 C5 176.8 180.0
C2 C3 C4 C6 178.3 179.7
C4 C3 C6 C7 184.8 180.0
C4 C3 C6 H6 4.8 359.7
H4 C4 C3 H4A 120.0 120.0
C1 C7 C6 C3 360.0 0.0
C6 C3 C2 C5 355.2 359.7
C2 C3 C6 C4 181.7 180.3
C6 C3 C4 H4 207.5 150.3
C6 C3 C4 H4A 87.5 30.3
C7 C6 C3 H6 180.0 180.3
C3 C6 C7 H7 180.0 180.0
N3 C8 N1 C9 180.5 180.0
N1 C8 N3 N2 181.2 180.1
N3 C8 N1 HN1 0.5 359.7
HN3 N3 C8 HN3A 240.0 180.0
S C9 N4 N1 179.7 180.0
N4 C9 N1 HN1 177.3 180.2
C9 N4 N2 C8 358.5 360.0
C1 C7 C6 H7 180.0 180.1
C3 C6 C7 H6 180.0 179.7
C8 N1 HN1 C9 180.0 180.3
HN1 N1 C8 N2 181.6 179.7
HN1 N1 C8 N3 0.5 359.7
HN1 N1 C9 N4 177.3 180.2
C8 N3 HN3 HN3A 120.0 180.0
C8 N3 HN3A HN3 239.9 180.0
H4 C4 S C9 50.7 300.0
S C4 H4 C3 233.3 240.0
S C4 H4 H4A 116.6 120.0
H4 C4 C3 C6 207.5 150.3
C3 C4 H4 H4A 243.3 240.0
H4A C4 S C9 170.7 60.0
S C4 H4A C3 126.7 120.0
S C4 H4A H4 243.3 240.0
H4A C4 C3 C6 87.5 30.3
C3 C4 H4A H4 116.7 120.0
H5 C5 C1 C7 189.7 180.3
C1 C5 H5 C2 180.0 180.1
C3 C6 H6 C7 180.0 180.3
H6 C6 C7 H7 360.0 0.3
C1 C7 H7 C6 180.0 179.9
H7 C7 C6 H6 360.0 0.3