PDB Chemical Component SZ3

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SZ3

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N	C1	1.455	1.469
O	C4	1.443	1.430
C1	C2	1.522	1.531
C1	C6	1.525	1.530
C2	C3	1.523	1.530
C3	C4	1.534	1.530
C4	C5	1.535	1.530
C5	C6	1.522	1.531
N	HN	0.999	1.009
N	HNA	1.000	1.009
O	HO	0.950	0.967
C1	H1	1.100	1.090
C2	H2	1.100	1.090
C2	H2A	1.100	1.090
C3	H3	1.100	1.091
C3	H3A	1.100	1.090
C4	H4	1.100	1.089
C5	H5	1.100	1.091
C5	H5A	1.100	1.089
C6	H6	1.100	1.089
C6	H6A	1.100	1.090

Bond Angles for SZ3

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N	C1	C2	109.7	109.5
N	C1	C6	109.0	109.5
C1	N	HN	109.5	111.0
C1	N	HNA	109.5	111.0
N	C1	H1	110.1	109.5
O	C4	C3	118.0	109.4
O	C4	C5	117.9	109.5
C4	O	HO	109.5	114.0
O	C4	H4	102.4	109.5
C2	C1	C6	110.6	109.5
C1	C2	C3	113.5	109.4
C2	C1	H1	108.4	109.4
C1	C2	H2	108.2	109.4
C1	C2	H2A	108.2	109.4
C1	C6	C5	111.3	109.5
C6	C1	H1	109.1	109.5
C1	C6	H6	108.9	109.5
C1	C6	H6A	108.9	109.5
C2	C3	C4	112.7	109.5
C3	C2	H2	108.2	109.5
C3	C2	H2A	108.2	109.5
C2	C3	H3	108.4	109.4
C2	C3	H3A	108.4	109.5
C3	C4	C5	121.3	109.5
C4	C3	H3	108.4	109.5
C4	C3	H3A	108.4	109.5
C3	C4	H4	91.9	109.5
C4	C5	C6	111.9	109.5
C5	C4	H4	92.4	109.5
C4	C5	H5	108.7	109.5
C4	C5	H5A	108.7	109.5
C6	C5	H5	108.6	109.4
C6	C5	H5A	108.6	109.4
C5	C6	H6	108.9	109.5
C5	C6	H6A	108.9	109.4
HN	N	HNA	109.4	111.0
H2	C2	H2A	110.7	109.5
H3	C3	H3A	110.5	109.4
H5	C5	H5A	110.3	109.5
H6	C6	H6A	110.0	109.5

Torsion Angles for SZ3

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	N	C6	121.2	120.0
N	C1	C2	C3	180.9	180.0
C2	C1	N	H1	240.8	240.0
N	C1	C2	H2	300.9	300.0
N	C1	C2	H2A	60.9	60.0
N	C1	C6	C5	183.1	180.0
C6	C1	N	H1	119.6	120.0
N	C1	C6	H6	303.1	300.0
N	C1	C6	H6A	63.1	60.0
HN	N	C1	HNA	240.0	236.0
C2	C3	C4	O	169.9	180.0
C3	C4	O	C5	161.6	119.9
O	C4	C3	H3	49.9	60.0
O	C4	C3	H3A	289.9	300.1
C3	C4	O	H4	261.0	240.0
O	C4	C5	C6	194.1	180.0
C5	C4	O	H4	99.5	120.1
O	C4	C5	H5	314.0	299.9
O	C4	C5	H5A	74.1	60.0
N	C1	C2	C6	239.8	240.0
C2	C1	N	HN	180.0	180.0
C2	C1	N	HNA	300.0	303.9
N	C1	C2	H1	120.2	120.0
C2	C1	C6	C5	62.5	60.0
C6	C1	C2	H1	240.4	240.0
C2	C1	C6	H6	182.5	180.0
C2	C1	C6	H6A	302.5	300.0
C1	C2	C3	C4	40.9	60.1
C3	C2	C1	H2	240.0	240.0
C3	C2	C1	H2A	120.0	120.0
C1	C2	C3	H3	160.9	180.0
C1	C2	C3	H3A	280.8	300.0
H2	C2	C1	H2A	240.0	240.0
N	C1	C6	C2	120.6	120.0
C6	C1	N	HN	58.8	60.0
C6	C1	N	HNA	178.8	183.9
N	C1	C6	H1	239.8	240.0
C6	C1	C2	C3	301.1	300.0
C2	C1	C6	H1	119.1	120.0
C6	C1	C2	H2	61.1	60.0
C6	C1	C2	H2A	181.1	180.0
C4	C5	C6	C1	311.9	300.0
C1	C6	C5	H5	191.9	180.0
C1	C6	C5	H5A	71.9	60.0
C5	C6	C1	H6	240.0	240.0
C5	C6	C1	H6A	120.0	119.9
H6	C6	C1	H6A	240.0	240.0
O	C4	C3	C2	169.9	180.0
C3	C2	C1	C6	301.1	300.0
C3	C2	C1	H1	60.7	60.0
C1	C2	C3	H2	120.0	120.0
C1	C2	C3	H2A	240.0	240.1
C2	C3	C4	C5	330.8	299.9
C4	C3	C2	H3	240.0	240.1
C4	C3	C2	H3A	120.0	120.1
C2	C3	C4	H4	64.8	60.0
H2	C2	C3	H2A	120.0	120.1
H3	C3	C2	H3A	240.0	240.0
O	C4	C3	C5	199.1	240.0
C3	C4	O	HO	180.0	180.0
O	C4	C3	H4	105.1	120.0
C4	C3	C2	H2	280.9	300.1
C4	C3	C2	H2A	160.9	180.0
C2	C3	C4	H3	120.0	119.9
C2	C3	C4	H3A	240.0	239.9
C3	C4	C5	C6	33.1	60.0
C5	C4	C3	H4	266.0	239.9
C3	C4	C5	H5	153.1	180.0
C3	C4	C5	H5A	273.2	300.1
H3	C3	C4	H3A	120.0	120.0
O	C4	C5	C3	160.9	119.9
C5	C4	O	HO	18.4	60.0
O	C4	C5	H4	254.7	240.0
C1	C6	C5	C4	311.9	300.0
C5	C4	C3	H3	210.8	180.0
C5	C4	C3	H3A	90.8	60.0
C3	C4	C5	H4	93.7	120.1
C6	C5	C4	H5	240.0	240.0
C6	C5	C4	H5A	120.0	120.0
C4	C5	C6	H6	191.8	180.0
C4	C5	C6	H6A	71.9	60.0
H5	C5	C4	H5A	240.0	239.9
C5	C6	C1	H1	303.4	300.0
C1	C6	C5	H6	120.0	120.0
C1	C6	C5	H6A	240.0	240.0
C6	C5	C4	H4	299.4	300.0
C4	C5	C6	H5	120.0	120.0
C4	C5	C6	H5A	240.0	240.0
H5	C5	C6	H5A	120.0	120.0
H6	C6	C5	H6A	120.0	120.0
HN	N	C1	C2	180.0	180.0
HN	N	C1	C6	58.8	60.0
C1	N	HN	HNA	120.0	123.9
HN	N	C1	H1	299.2	300.0
HNA	N	C1	C2	300.0	303.9
HNA	N	C1	C6	178.8	183.9
C1	N	HNA	HN	240.0	236.1
HNA	N	C1	H1	59.2	63.9
HO	O	C4	C3	180.0	180.0
HO	O	C4	C5	18.4	60.0
HO	O	C4	H4	279.0	300.0
N	C1	H1	C2	240.1	240.0
N	C1	H1	C6	119.5	120.0
H1	C1	N	HN	299.2	300.0
H1	C1	N	HNA	59.2	63.9
C2	C1	H1	C6	239.5	240.0
H1	C1	C2	C3	60.7	60.0
H1	C1	C2	H2	180.7	180.0
H1	C1	C2	H2A	300.7	300.0
H1	C1	C6	C5	303.4	300.0
H1	C1	C6	H6	63.4	60.0
H1	C1	C6	H6A	183.3	180.1
H2	C2	C1	C6	61.1	60.0
C1	C2	H2	C3	236.7	240.0
H2	C2	C1	H1	180.7	180.0
C1	C2	H2	H2A	118.4	120.0
H2	C2	C3	C4	280.9	300.1
C3	C2	H2	H2A	241.6	239.9
H2	C2	C3	H3	40.9	60.0
H2	C2	C3	H3A	160.8	180.0
H2A	C2	C1	C6	181.1	180.0
C1	C2	H2A	C3	123.3	119.9
H2A	C2	C1	H1	300.7	300.0
C1	C2	H2A	H2	241.7	240.0
H2A	C2	C3	C4	160.9	180.0
C3	C2	H2A	H2	118.4	120.1
H2A	C2	C3	H3	280.9	299.9
H2A	C2	C3	H3A	40.9	59.9
C2	C3	H3	C4	237.4	240.1
H3	C3	C2	H2	40.9	60.0
H3	C3	C2	H2A	280.9	299.9
C2	C3	H3	H3A	118.7	120.0
H3	C3	C4	C5	210.8	180.0
C4	C3	H3	H3A	241.3	240.0
H3	C3	C4	H4	304.8	300.1
C2	C3	H3A	C4	122.6	120.1
H3A	C3	C2	H2	160.8	180.0
H3A	C3	C2	H2A	40.9	59.9
C2	C3	H3A	H3	241.3	240.0
H3A	C3	C4	C5	90.8	60.0
C4	C3	H3A	H3	118.7	120.0
H3A	C3	C4	H4	184.8	180.1
O	C4	H4	C3	240.7	240.0
O	C4	H4	C5	119.2	120.0
H4	C4	O	HO	279.0	300.0
C3	C4	H4	C5	238.5	240.0
H4	C4	C3	H3	304.8	300.1
H4	C4	C3	H3A	184.8	180.1
H4	C4	C5	C6	299.4	300.0
H4	C4	C5	H5	59.4	59.9
H4	C4	C5	H5A	179.4	180.0
C4	C5	H5	C6	238.0	240.0
H5	C5	C4	H4	59.4	59.9
C4	C5	H5	H5A	119.0	120.1
C6	C5	H5	H5A	241.0	240.1
H5	C5	C6	H6	71.9	60.0
H5	C5	C6	H6A	311.9	300.0
C4	C5	H5A	C6	122.0	120.0
H5A	C5	C4	H4	179.4	180.0
C4	C5	H5A	H5	241.0	240.0
C6	C5	H5A	H5	119.0	120.0
H5A	C5	C6	H6	311.8	300.0
H5A	C5	C6	H6A	191.9	180.0
C1	C6	H6	C5	238.5	240.0
H6	C6	C1	H1	63.4	60.0
C1	C6	H6	H6A	119.3	120.0
H6	C6	C5	H5	71.9	60.0
H6	C6	C5	H5A	311.8	300.0
C5	C6	H6	H6A	240.8	240.0
C1	C6	H6A	C5	121.5	120.0
H6A	C6	C1	H1	183.3	180.1
C1	C6	H6A	H6	240.7	239.9
H6A	C6	C5	H5	311.9	300.0
H6A	C6	C5	H5A	191.9	180.0
C5	C6	H6A	H6	119.3	120.0