PDB Chemical Component SYE

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SYE

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.398	1.361
C1	C6	1.412	1.393
C2	C3	1.404	1.407
C3	C4	1.415	1.417
C3	N11	1.364	1.337
C4	C5	1.395	1.405
C4	C14	1.404	1.408
C5	C6	1.412	1.361
N11	C12	1.356	1.311
C12	C13	1.406	1.393
C12	C17	1.508	1.507
C13	C14	1.410	1.366
C17	P18	1.796	1.823
P18	O21	1.486	1.480
P18	O22	1.628	1.611
P18	O23	1.613	1.610
C1	H1	1.080	1.080
C2	H2	1.080	1.080
C5	H5	1.080	1.081
C6	H6	1.080	1.081
C13	H13	1.079	1.079
C14	H14	1.079	1.080
C17	H17	1.100	1.089
C17	H17A	1.100	1.090
O22	HO22	0.950	0.967
O23	HO23	0.949	0.967

Bond Angles for SYE

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	119.5	121.1
C1	C2	C3	121.1	119.8
C2	C1	H1	120.3	119.5
C1	C2	H2	119.4	120.1
C1	C6	C5	119.4	120.9
C6	C1	H1	120.3	119.5
C1	C6	H6	120.3	119.5
C2	C3	C4	119.5	119.1
C2	C3	N11	120.0	121.1
C3	C2	H2	119.5	120.1
C4	C3	N11	120.5	119.8
C3	C4	C5	119.5	119.6
C3	C4	C14	119.7	119.0
C3	N11	C12	120.5	121.3
C5	C4	C14	120.8	121.4
C4	C5	C6	121.0	119.7
C4	C5	H5	119.5	120.2
C4	C14	C13	118.8	118.1
C4	C14	H14	120.6	120.9
C6	C5	H5	119.5	120.2
C5	C6	H6	120.3	119.6
N11	C12	C13	121.5	121.8
N11	C12	C17	118.8	119.1
C13	C12	C17	119.7	119.1
C12	C13	C14	119.1	120.0
C12	C13	H13	120.5	120.0
C12	C17	P18	111.6	109.4
C12	C17	H17	108.7	109.4
C12	C17	H17A	108.8	109.4
C14	C13	H13	120.4	120.0
C13	C14	H14	120.6	121.0
C17	P18	O21	110.5	109.5
C17	P18	O22	104.1	109.5
C17	P18	O23	104.9	109.5
P18	C17	H17	108.8	109.5
P18	C17	H17A	108.7	109.5
O21	P18	O22	116.9	109.5
O21	P18	O23	112.5	109.4
O22	P18	O23	107.1	109.5
P18	O22	HO22	109.5	113.9
P18	O23	HO23	109.5	114.0
H17	C17	H17A	110.2	109.5

Torsion Angles for SYE

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	C5	1.7	0.0
C6	C1	C2	H1	180.0	180.2
C2	C1	C6	H6	181.7	180.0
C1	C2	C3	C4	0.1	360.0
C1	C2	C3	N11	180.9	180.0
C3	C2	C1	H2	180.0	180.0
C6	C1	C2	C3	358.4	360.0
C2	C1	C6	H1	180.0	179.8
C6	C1	C2	H2	178.4	179.9
C4	C5	C6	C1	359.7	360.0
C1	C6	C5	H5	179.7	180.0
C5	C6	C1	H6	180.0	180.1
C3	C2	C1	C6	358.4	360.0
C3	C2	C1	H1	178.4	179.8
C1	C2	C3	H2	180.0	180.0
C4	C3	C2	N11	179.2	180.0
C2	C3	C4	C5	1.2	0.0
C2	C3	C4	C14	180.4	180.0
C2	C3	N11	C12	179.2	180.0
C2	C3	C4	N11	180.8	180.0
C4	C3	C2	H2	180.1	180.0
C4	C3	N11	C12	360.0	360.0
C5	C4	C3	C14	180.8	180.0
C3	C4	C5	C6	358.8	360.0
C3	C4	C5	H5	178.8	180.0
C3	C4	C14	C13	359.9	360.0
C3	C4	C14	H14	179.9	180.0
C2	C3	N11	C4	179.2	180.0
N11	C3	C2	H2	0.9	0.0
N11	C3	C4	C5	180.5	180.0
N11	C3	C4	C14	359.7	0.0
C3	N11	C12	C13	0.9	0.0
C3	N11	C12	C17	179.1	180.0
C1	C6	C5	C4	359.7	360.0
C5	C4	C3	N11	180.5	180.0
C3	C4	C5	C14	179.2	180.0
C5	C4	C14	C13	179.0	179.9
C5	C4	C14	H14	359.0	359.9
C6	C5	C4	H5	180.0	180.0
C4	C5	C6	H6	179.7	180.0
C14	C4	C3	N11	359.7	0.0
C3	C4	C14	C5	180.8	180.0
C14	C4	C5	C6	179.7	180.0
C14	C4	C5	H5	359.7	360.0
C12	C13	C14	C4	0.9	0.0
C4	C14	C13	H13	180.9	180.1
C13	C14	C4	H14	180.0	180.0
C5	C6	C1	H1	181.7	180.2
C1	C6	C5	H6	180.0	179.9
C6	C5	C4	C14	179.7	180.0
C4	C5	C6	H5	180.0	180.0
C13	C12	N11	C17	181.8	180.0
N11	C12	C13	C14	358.7	360.0
N11	C12	C13	H13	178.7	180.0
N11	C12	C17	P18	105.9	90.0
N11	C12	C17	H17	225.9	210.0
N11	C12	C17	H17A	345.9	330.0
C4	C14	C13	C12	0.9	0.0
N11	C12	C13	C17	178.2	180.0
C13	C12	C17	P18	284.1	270.0
C13	C12	C17	H17	44.2	30.0
C13	C12	C17	H17A	164.1	150.0
C14	C13	C12	H13	180.0	180.0
C12	C13	C14	H14	180.9	180.0
N11	C12	C17	C13	181.7	180.0
C17	C12	C13	C14	180.4	180.0
C17	C12	C13	H13	0.4	360.0
C12	C17	P18	O21	313.9	305.0
C12	C17	P18	O22	187.6	65.0
C12	C17	P18	O23	75.3	185.0
P18	C17	C12	H17	240.0	240.0
P18	C17	C12	H17A	120.0	120.0
H17	C17	C12	H17A	240.0	240.0
C4	C14	C13	H14	180.0	180.0
C14	C13	C12	C17	180.4	180.0
C12	C13	C14	H13	180.0	180.0
C12	C17	P18	H17	120.0	119.9
C12	C17	P18	H17A	240.0	240.0
O21	P18	C17	O22	126.2	240.0
O21	P18	C17	O23	238.6	120.0
O22	P18	C17	O23	112.3	240.0
C17	P18	O22	HO22	122.1	60.0
C17	P18	O23	HO23	239.8	180.0
H17	C17	P18	H17A	120.0	120.1
C17	P18	O21	O22	241.3	120.0
C17	P18	O21	O23	116.8	240.0
O21	P18	C17	H17	193.9	185.0
O21	P18	C17	H17A	73.9	64.9
O22	P18	O21	O23	235.6	120.0
O21	P18	O22	HO22	360.0	180.0
O21	P18	O23	HO23	360.0	60.0
C17	P18	O22	O21	122.1	239.9
C17	P18	O22	O23	249.2	120.0
O22	P18	C17	H17	67.7	305.0
O22	P18	C17	H17A	307.7	185.0
O21	P18	O22	O23	127.1	240.0
O22	P18	O23	HO23	129.7	300.0
C17	P18	O23	O21	239.9	120.0
C17	P18	O23	O22	110.2	240.0
O23	P18	C17	H17	315.3	65.0
O23	P18	C17	H17A	195.3	304.9
O21	P18	O23	O22	230.3	120.0
O23	P18	O22	HO22	232.8	300.0
C2	C1	H1	C6	180.0	180.2
H1	C1	C2	C3	178.4	179.8
H1	C1	C2	H2	358.4	359.7
H1	C1	C6	C5	181.7	180.2
H1	C1	C6	H6	1.7	0.2
H2	C2	C1	C6	178.4	179.9
C1	C2	H2	C3	180.0	180.0
H2	C2	C1	H1	358.4	359.7
H2	C2	C3	C4	180.1	180.0
H2	C2	C3	N11	0.9	0.0
H5	C5	C4	C14	359.7	360.0
C4	C5	H5	C6	180.0	180.0
H5	C5	C6	H6	359.7	0.0
C1	C6	H6	C5	180.0	180.1
H6	C6	C1	H1	1.7	0.2
H6	C6	C5	H5	359.7	0.0
H13	C13	C12	C17	0.4	360.0
C12	C13	H13	C14	180.0	180.0
H13	C13	C14	H14	0.9	0.1
C4	C14	H14	C13	180.0	180.0
H14	C14	C13	H13	0.9	0.1
C12	C17	H17	P18	238.2	240.0
C12	C17	H17	H17A	119.1	120.0
H17	C17	P18	O21	193.9	185.0
H17	C17	P18	O22	67.7	305.0
H17	C17	P18	O23	315.3	65.0
P18	C17	H17	H17A	240.9	239.9
C12	C17	H17A	P18	121.8	120.0
C12	C17	H17A	H17	240.9	240.0
H17A	C17	P18	O21	73.9	64.9
H17A	C17	P18	O22	307.7	185.0
H17A	C17	P18	O23	195.3	304.9
P18	C17	H17A	H17	119.1	120.1
HO22	O22	P18	O23	232.8	300.0