PDB Chemical Component SXS

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SXS

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1	C2	1.206	1.215
C2	N3	1.390	1.341
C2	C4	1.483	1.466
N3	S13	1.598	1.671
C4	C5	1.363	1.408
C4	C12	1.335	1.404
C5	C6	1.383	1.373
C6	C7	1.393	1.392
C7	N8	1.345	1.391
C7	C11	1.357	1.396
C11	C12	1.335	1.363
C12	S13	1.706	1.772
S13	O14	1.469	1.421
S13	O15	1.455	1.421
N3	HN3	1.000	0.970
C5	H5	1.080	1.080
C6	H6	1.080	1.080
N8	HN8	1.000	0.969
N8	HN8A	1.000	0.970
C11	H11	1.080	1.080

Bond Angles for SXS

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C2	N3	125.9	120.9
O1	C2	C4	118.3	121.0
N3	C2	C4	114.8	118.1
C2	N3	S13	107.2	105.9
C2	N3	HN3	126.4	127.1
C2	C4	C5	129.7	129.9
C2	C4	C12	108.9	112.5
N3	S13	C12	98.3	99.8
N3	S13	O14	114.0	107.6
N3	S13	O15	110.5	107.6
S13	N3	HN3	126.4	127.0
C5	C4	C12	121.3	117.6
C4	C5	C6	113.0	120.4
C4	C5	H5	123.5	119.8
C4	C12	C11	129.8	122.1
C4	C12	S13	110.0	103.7
C5	C6	C7	121.1	120.8
C6	C5	H5	123.5	119.8
C5	C6	H6	119.4	119.5
C6	C7	N8	111.4	120.3
C6	C7	C11	125.7	119.4
C7	C6	H6	119.5	119.6
N8	C7	C11	122.7	120.3
C7	N8	HN8	109.5	120.0
C7	N8	HN8A	109.5	120.0
C7	C11	C12	108.7	119.7
C7	C11	H11	125.7	120.1
C11	C12	S13	120.0	134.2
C12	C11	H11	125.6	120.2
C12	S13	O14	106.5	107.6
C12	S13	O15	108.4	107.3
O14	S13	O15	117.1	124.2
HN8	N8	HN8A	109.4	120.1

Torsion Angles for SXS

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N3	C2	O1	C4	168.1	180.2
O1	C2	N3	S13	183.2	180.1
O1	C2	N3	HN3	3.2	0.1
O1	C2	C4	C5	356.7	359.9
O1	C2	C4	C12	173.4	180.0
O1	C2	N3	C4	191.5	179.8
N3	C2	C4	C5	187.3	179.8
N3	C2	C4	C12	4.0	359.8
C2	N3	S13	C12	8.2	359.8
C2	N3	S13	O14	120.5	112.0
C2	N3	S13	O15	254.9	248.0
S13	N3	C2	HN3	180.0	180.0
O1	C2	C4	N3	169.4	180.2
C4	C2	N3	S13	351.6	0.2
C4	C2	N3	HN3	171.7	180.3
C5	C4	C2	C12	183.3	180.0
C2	C4	C5	C6	176.7	180.1
C2	C4	C5	H5	356.7	359.9
C2	C4	C12	C11	186.8	180.0
C2	C4	C12	S13	2.1	0.1
S13	N3	C2	C4	351.6	0.2
C2	N3	S13	HN3	180.0	180.0
C4	C12	S13	N3	353.7	0.0
C11	C12	S13	N3	169.5	180.2
C12	S13	N3	O14	247.7	247.8
C12	S13	N3	O15	113.3	111.8
O14	S13	N3	O15	225.6	224.0
C2	C4	C5	C12	176.4	180.0
C5	C4	C12	C11	3.9	360.0
C5	C4	C12	S13	179.1	180.1
C4	C5	C6	C7	355.4	359.9
C6	C5	C4	H5	180.0	180.1
C4	C5	C6	H6	175.4	180.0
C2	C4	C12	C5	182.9	180.0
N3	S13	C12	C4	353.7	0.0
C12	C4	C5	C6	0.3	0.0
C12	C4	C5	H5	180.3	179.9
C7	C11	C12	C4	357.1	0.0
C11	C12	C4	S13	184.7	179.9
C4	C12	C11	H11	177.1	180.0
C4	C12	S13	O14	235.5	247.9
C4	C12	S13	O15	108.6	112.0
C6	C5	C4	C12	0.3	0.0
C4	C5	C6	H5	180.0	179.9
C5	C6	C7	N8	182.1	180.0
C5	C6	C7	C11	5.9	0.1
C7	C6	C5	H6	180.0	179.9
C7	C6	C5	H5	175.4	180.0
C5	C6	C7	H6	180.0	180.1
N8	C7	C6	C11	176.3	180.0
C6	C7	N8	HN8	180.0	0.0
C6	C7	N8	HN8A	300.0	180.1
C6	C7	C11	C12	358.1	360.0
C6	C7	C11	H11	178.0	180.0
C6	C7	N8	C11	183.6	180.0
N8	C7	C6	H6	2.1	360.0
N8	C7	C11	C12	182.2	180.0
N8	C7	C11	H11	2.2	0.0
HN8	N8	C7	HN8A	240.0	179.9
C4	C12	C11	C7	357.1	0.0
C6	C7	C11	N8	175.9	180.0
C11	C7	C6	H6	185.8	180.0
C11	C7	N8	HN8	356.4	180.0
C11	C7	N8	HN8A	116.4	0.0
C7	C11	C12	S13	182.2	179.9
C12	C11	C7	H11	180.0	180.0
N3	S13	C12	C11	169.5	180.2
C4	C12	C11	S13	174.8	180.1
C7	C11	C12	H11	180.0	180.0
C11	C12	S13	O14	51.3	68.0
C11	C12	S13	O15	284.4	292.2
N3	S13	C12	O14	118.1	112.1
N3	S13	C12	O15	245.0	248.0
C12	S13	N3	HN3	188.2	179.8
C4	C12	S13	C11	184.2	179.9
S13	C12	C11	H11	2.2	359.8
O14	S13	C12	O15	126.9	135.9
N3	S13	O14	C12	252.8	253.2
N3	S13	O14	O15	131.2	126.7
O14	S13	N3	HN3	300.5	292.0
C12	S13	O14	O15	238.5	233.5
N3	S13	O15	C12	106.7	106.6
N3	S13	O15	O14	227.2	233.3
O15	S13	N3	HN3	74.9	68.0
C12	S13	O15	O14	120.5	126.6
HN3	N3	C2	C4	171.7	180.3
C2	N3	HN3	S13	180.0	180.0
HN3	N3	S13	C12	188.2	179.8
HN3	N3	S13	O14	300.5	292.0
HN3	N3	S13	O15	74.9	68.0
H5	C5	C4	C12	180.3	179.9
C4	C5	H5	C6	180.0	180.1
H5	C5	C6	C7	175.4	180.0
H5	C5	C6	H6	355.5	0.1
C5	C6	H6	C7	180.0	179.9
H6	C6	C5	H5	355.5	0.1
H6	C6	C7	N8	2.1	360.0
H6	C6	C7	C11	185.8	180.0
HN8	N8	C7	C11	356.4	180.0
C7	N8	HN8	HN8A	120.0	180.1
HN8A	N8	C7	C11	116.4	0.0
C7	N8	HN8A	HN8	240.0	179.9
C7	C11	H11	C12	180.0	180.0
H11	C11	C12	S13	2.2	359.8