PDB Chemical Component SWG

Ideal Model

Chemical Description

Name 2-[(4Z)-2-[(1R)-1-amino-2-hydroxy-ethyl]-4-(1H-indol-3-ylmethylidene)-5-oxo-imidazol-1-yl]ethanoic acid
Formula C16 H16 N4 O4
Formal charge 0
Molecular weight 328.323 g/mol
Component type L-PEPTIDE LINKING
Nonstandard Parent Id SER, TRP, GLY

Chemical features

Atom count 40
Chiral atom count 1
Chiral atoms CA1
Observed leaving atoms OXT HXT H2
Bond count 42
Aromatic bond count 10

Chemical Identifiers

Systematic name (OpenEye OEToolkits) 2-[(4Z)-2-[(1R)-1-amino-2-hydroxy-ethyl]-4-(1H-indol-3-ylmethylidene)-5-oxo-imidazol-1-yl]ethanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) N[C@@H](CO)C1=N\\C(=C/c2c[nH]c3ccccc23)C(=O)N1CC(O)=O
SMILES (CACTVS) N[CH](CO)C1=NC(=Cc2c[nH]c3ccccc23)C(=O)N1CC(O)=O
Stereo SMILES (OpenEye) c1ccc2c(c1)c(c[nH]2)\\C=C/3\\C(=O)N(C(=N3)[C@H](CO)N)CC(=O)O
InChI descriptor InChI=1S/C16H16N4O4/c17-11(8-21)15-19-13(16(24)20(15)7-14(22)23)5-9-6-18-12-4-2-1-3-10(9)12/h1-6,11,18,21H,7-8,17H2,(H,22,23)/b13-5-/t11-/m0/s1
InChIKey descriptor JQODGFVDKNHIFR-LEBPBNDJSA-N

Status Information

Last modified 2023-11-03
Created 2011-03-25
Release status REL
Model PDB code 2YE0
Processing site EBI