PDB Chemical Component SWG

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SWG

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CD2 CE3 1.422 1.392
CD2 CE2 1.388 1.404
CD2 CG 1.465 1.476
CE3 CZ3 1.393 1.378
CZ3 CH2 1.423 1.387
CH2 CZ2 1.406 1.378
CZ2 CE2 1.402 1.391
CE2 NE1 1.357 1.381
NE1 CD1 1.369 1.353
CD1 CG 1.349 1.381
CG CB2 1.510 1.414
CB2 CA2 1.396 1.383
CA2 N2 1.367 1.367
CA2 C2 1.460 1.467
N2 C1 1.375 1.297
C2 O2 1.235 1.219
C2 N3 1.316 1.352
N3 CA3 1.466 1.465
N3 C1 1.337 1.367
CA3 C3 1.463 1.507
C3 O3 1.232 1.208
C3 OXT 1.373 1.342
C1 CA1 1.476 1.506
CA1 N1 1.484 1.469
CA1 CB1 1.499 1.530
CB1 OG1 1.434 1.429
CE3 HE3 1.080 1.080
CZ3 HZ3 1.080 1.080
CH2 HH2 1.080 1.081
CZ2 HZ2 1.080 1.081
NE1 HE1 1.000 0.971
CD1 HD1 1.080 1.080
CB2 HB2 1.080 1.080
CA3 HA31 1.100 1.090
CA3 HA32 1.100 1.090
CA1 HA1 1.100 1.090
N1 H 1.001 1.009
N1 H2 1.000 1.009
CB1 HB11 1.100 1.090
CB1 HB12 1.100 1.089
OG1 HG1 0.950 0.966
OXT HXT 0.950 0.968

Bond Angles for SWG

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CE3 CD2 CE2 120.1 120.1
CE3 CD2 CG 133.7 133.9
CD2 CE3 CZ3 121.1 119.7
CD2 CE3 HE3 119.4 120.2
CE2 CD2 CG 106.2 106.0
CD2 CE2 CZ2 121.0 119.3
CD2 CE2 NE1 108.4 107.7
CD2 CG CD1 105.9 106.2
CD2 CG CB2 124.4 126.9
CE3 CZ3 CH2 117.0 120.2
CZ3 CE3 HE3 119.4 120.1
CE3 CZ3 HZ3 121.5 119.9
CZ3 CH2 CZ2 123.1 120.7
CH2 CZ3 HZ3 121.5 119.9
CZ3 CH2 HH2 118.5 119.7
CH2 CZ2 CE2 117.8 120.0
CZ2 CH2 HH2 118.4 119.6
CH2 CZ2 HZ2 121.1 120.0
CZ2 CE2 NE1 130.7 133.0
CE2 CZ2 HZ2 121.1 120.0
CE2 NE1 CD1 109.3 110.7
CE2 NE1 HE1 125.4 124.7
NE1 CD1 CG 110.2 109.5
CD1 NE1 HE1 125.4 124.7
NE1 CD1 HD1 124.9 125.3
CD1 CG CB2 129.7 126.9
CG CD1 HD1 124.9 125.3
CG CB2 CA2 119.0 120.1
CG CB2 HB2 120.5 120.0
CB2 CA2 N2 125.3 127.0
CB2 CA2 C2 124.4 127.1
CA2 CB2 HB2 120.5 120.0
N2 CA2 C2 110.3 105.8
CA2 N2 C1 103.3 109.3
CA2 C2 O2 129.5 127.3
CA2 C2 N3 103.5 105.3
N2 C1 N3 111.5 111.2
N2 C1 CA1 121.5 124.4
O2 C2 N3 127.0 127.3
C2 N3 CA3 120.7 125.8
C2 N3 C1 111.3 108.4
CA3 N3 C1 128.0 125.8
N3 CA3 C3 126.5 109.5
N3 CA3 HA31 104.1 109.5
N3 CA3 HA32 100.2 109.5
N3 C1 CA1 127.0 124.4
CA3 C3 O3 122.8 120.0
CA3 C3 OXT 111.3 120.0
C3 CA3 HA31 104.2 109.5
C3 CA3 HA32 100.2 109.5
O3 C3 OXT 125.7 120.0
C3 OXT HXT 109.5 117.0
C1 CA1 N1 103.5 109.5
C1 CA1 CB1 117.7 109.5
C1 CA1 HA1 106.9 109.5
N1 CA1 CB1 105.4 109.5
N1 CA1 HA1 119.0 109.5
CA1 N1 H 109.5 111.0
CA1 N1 H2 109.5 111.0
CA1 CB1 OG1 105.5 109.5
CB1 CA1 HA1 105.1 109.4
CA1 CB1 HB11 110.8 109.4
CA1 CB1 HB12 111.7 109.5
OG1 CB1 HB11 110.8 109.5
OG1 CB1 HB12 111.7 109.5
CB1 OG1 HG1 109.5 114.0
HA31 CA3 HA32 124.1 109.5
H N1 H2 109.4 111.0
HB11 CB1 HB12 106.4 109.5

Torsion Angles for SWG

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CE2 CD2 CE3 CG 180.0 180.3
CE3 CD2 CE2 CZ2 360.0 360.0
CE3 CD2 CE2 NE1 180.0 179.9
CE3 CD2 CG CD1 180.0 179.9
CE3 CD2 CG CB2 360.0 0.1
CD2 CE3 CZ3 CH2 360.0 360.0
CZ3 CE3 CD2 HE3 180.0 180.1
CD2 CE3 CZ3 HZ3 180.0 180.0
CE3 CD2 CE2 CG 180.0 179.7
CE2 CD2 CE3 CZ3 0.0 0.0
CE2 CD2 CE3 HE3 180.0 180.0
CE2 CD2 CG CD1 0.0 359.6
CE2 CD2 CG CB2 180.0 179.7
CH2 CZ2 CE2 CD2 360.0 0.0
CZ2 CE2 CD2 NE1 180.0 180.1
CD2 CE2 CZ2 HZ2 180.0 180.0
CD2 CE2 NE1 CD1 360.0 0.1
CD2 CE2 NE1 HE1 180.0 179.9
CE3 CD2 CG CE2 180.0 180.3
CG CD2 CE3 CZ3 180.0 179.7
CG CD2 CE3 HE3 360.0 359.6
CG CD2 CE2 CZ2 180.0 180.2
CG CD2 CE2 NE1 0.0 0.2
NE1 CD1 CG CD2 360.0 0.4
CD1 CG CD2 CB2 180.0 179.9
CD2 CG CD1 HD1 180.0 180.1
CD2 CG CB2 CA2 175.2 180.0
CD2 CG CB2 HB2 355.3 360.0
CZ3 CE3 CD2 CE2 0.0 0.0
CZ3 CE3 CD2 CG 180.0 179.7
CD2 CE3 CZ3 HE3 180.0 179.9
CE3 CZ3 CH2 CZ2 360.0 0.0
CH2 CZ3 CE3 HZ3 180.0 180.0
CE3 CZ3 CH2 HH2 180.0 180.0
CH2 CZ3 CE3 HE3 180.0 180.0
CE3 CZ3 CH2 HZ3 180.0 180.0
CZ3 CH2 CZ2 CE2 0.0 360.0
CZ2 CH2 CZ3 HH2 180.0 180.1
CZ3 CH2 CZ2 HZ2 180.0 180.0
CD2 CE2 CZ2 CH2 360.0 0.0
CZ2 CH2 CZ3 HZ3 180.0 180.0
CZ3 CH2 CZ2 HH2 180.0 179.9
CH2 CZ2 CE2 NE1 180.0 180.1
CE2 CZ2 CH2 HZ2 180.0 180.0
CZ2 CE2 CD2 CG 180.0 180.2
CD2 CE2 CZ2 NE1 180.0 179.9
CE2 CZ2 CH2 HH2 180.1 180.0
CH2 CZ2 CE2 HZ2 180.0 180.0
CZ2 CE2 NE1 CD1 180.0 180.0
CZ2 CE2 NE1 HE1 0.0 359.9
NE1 CE2 CD2 CG 0.0 0.2
CD2 CE2 NE1 CZ2 180.0 180.1
NE1 CE2 CZ2 HZ2 0.0 0.1
CE2 NE1 CD1 CG 0.0 359.7
CD1 NE1 CE2 HE1 180.0 180.1
CE2 NE1 CD1 HD1 180.0 180.0
CD2 CG CD1 NE1 360.0 0.4
CE2 NE1 CD1 HE1 180.0 179.9
NE1 CD1 CG CB2 180.0 180.3
CG CD1 NE1 HD1 180.0 179.7
CD2 CG CD1 CB2 180.0 180.1
CG CD1 NE1 HE1 180.0 179.8
NE1 CD1 CG HD1 180.0 180.3
CD1 CG CB2 CA2 355.2 0.1
CD1 CG CB2 HB2 175.2 180.1
CD2 CG CB2 CD1 180.1 179.9
CB2 CG CD1 HD1 0.0 0.0
CG CB2 CA2 N2 5.0 0.0
CG CB2 CA2 C2 185.1 179.7
CA2 CB2 CG HB2 180.0 180.0
CG CB2 CA2 HB2 180.0 180.0
N2 CA2 CB2 C2 179.9 180.4
CB2 CA2 N2 C1 180.1 180.0
CB2 CA2 C2 O2 359.9 0.1
CB2 CA2 C2 N3 180.0 180.0
CB2 CA2 N2 C2 180.1 179.7
N2 CA2 CB2 HB2 185.0 180.1
N2 CA2 C2 O2 180.0 179.8
N2 CA2 C2 N3 0.1 359.7
CA2 N2 C1 N3 359.9 359.8
CA2 N2 C1 CA1 180.0 180.0
CB2 CA2 C2 N2 179.9 180.3
C2 CA2 CB2 HB2 5.1 359.7
C2 CA2 N2 C1 0.0 0.3
O2 C2 CA2 N3 179.9 180.1
CA2 C2 N3 CA3 180.1 180.1
CA2 C2 N3 C1 359.9 0.2
C1 N2 CA2 C2 0.0 0.3
C2 N3 C1 N2 0.1 360.0
CA3 N3 C1 N2 180.0 180.1
N3 C1 N2 CA1 179.9 179.9
N2 C1 CA1 N1 259.7 325.0
N2 C1 CA1 CB1 15.4 85.1
N2 C1 CA1 HA1 133.2 205.0
CA2 C2 O2 N3 180.1 179.9
O2 C2 N3 CA3 0.1 360.0
O2 C2 N3 C1 180.0 180.1
CA2 C2 N3 O2 179.9 180.1
N2 C1 N3 C2 0.1 360.0
CA3 N3 C2 C1 180.2 179.9
C2 N3 CA3 C3 272.7 90.0
C2 N3 CA3 HA31 32.7 210.0
C2 N3 CA3 HA32 161.9 330.0
C2 N3 C1 CA1 180.1 179.9
N2 C1 N3 CA3 180.0 180.1
C2 N3 CA3 C1 179.8 180.1
CA3 N3 C1 CA1 359.9 360.0
N3 CA3 C3 O3 152.5 0.0
N3 CA3 C3 OXT 336.9 180.0
C3 CA3 N3 HA31 240.0 240.0
C3 CA3 N3 HA32 110.8 120.0
HA31 CA3 N3 HA32 230.8 240.0
N2 C1 N3 CA1 180.1 180.1
C2 N3 C1 CA3 180.2 179.9
C1 N3 CA3 C3 92.9 269.8
C1 N3 CA3 HA31 212.9 29.8
C1 N3 CA3 HA32 342.1 149.8
N3 C1 CA1 N1 79.8 145.2
N3 C1 CA1 CB1 195.5 265.2
N3 C1 CA1 HA1 313.3 25.2
C3 CA3 N3 C1 92.9 269.8
N3 CA3 C3 HA31 120.0 120.0
N3 CA3 C3 HA32 249.2 240.0
O3 C3 CA3 OXT 175.6 180.1
CA3 C3 OXT HXT 175.5 180.0
HA31 CA3 C3 HA32 129.2 120.0
CA3 C3 O3 OXT 185.0 179.9
O3 C3 CA3 HA31 32.5 240.0
O3 C3 CA3 HA32 263.3 120.0
O3 C3 OXT HXT 0.0 359.9
CA3 C3 OXT O3 175.4 180.1
OXT C3 CA3 HA31 216.9 60.0
OXT C3 CA3 HA32 87.7 300.0
N2 C1 CA1 N3 179.9 179.9
N1 CA1 C1 CB1 244.3 240.0
N1 CA1 C1 HA1 126.4 120.0
C1 CA1 N1 H 331.4 296.1
C1 CA1 N1 H2 91.4 60.0
C1 CA1 CB1 OG1 70.1 175.0
CB1 CA1 C1 HA1 242.1 240.0
C1 CA1 CB1 HB11 190.2 295.0
C1 CA1 CB1 HB12 308.6 55.0
C1 CA1 N1 CB1 124.2 120.0
C1 CA1 N1 HA1 241.6 240.0
N1 CA1 CB1 OG1 184.8 295.0
CB1 CA1 N1 HA1 117.4 120.0
N1 CA1 CB1 HB11 304.8 55.0
N1 CA1 CB1 HB12 63.3 175.0
H N1 CA1 H2 240.0 236.1
C1 CA1 CB1 N1 245.3 240.0
C1 CA1 CB1 HA1 118.8 120.0
N1 CA1 CB1 HA1 233.5 240.0
CB1 CA1 N1 H 207.3 176.0
CB1 CA1 N1 H2 327.2 300.0
OG1 CB1 CA1 HB11 240.0 240.0
OG1 CB1 CA1 HB12 121.5 120.0
CA1 CB1 OG1 HG1 153.2 180.0
HB11 CB1 CA1 HB12 241.5 240.0
OG1 CB1 CA1 HA1 311.3 55.0
CA1 CB1 OG1 HB11 120.0 120.0
CA1 CB1 OG1 HB12 238.5 240.0
HB11 CB1 OG1 HB12 118.5 120.0
HE3 CE3 CD2 CE2 180.0 180.0
HE3 CE3 CD2 CG 360.0 359.6
CD2 CE3 HE3 CZ3 180.0 180.1
HE3 CE3 CZ3 CH2 180.0 180.0
HE3 CE3 CZ3 HZ3 360.0 0.0
CE3 CZ3 HZ3 CH2 180.0 180.0
HZ3 CZ3 CE3 HE3 360.0 0.0
HZ3 CZ3 CH2 CZ2 180.0 180.0
HZ3 CZ3 CH2 HH2 360.0 360.0
CZ3 CH2 HH2 CZ2 180.0 180.1
HH2 CH2 CZ3 HZ3 360.0 360.0
HH2 CH2 CZ2 CE2 180.1 180.0
HH2 CH2 CZ2 HZ2 0.0 0.1
CH2 CZ2 HZ2 CE2 180.0 180.0
HZ2 CZ2 CH2 HH2 0.0 0.1
HZ2 CZ2 CE2 NE1 0.0 0.1
CE2 NE1 HE1 CD1 180.0 180.2
HE1 NE1 CD1 CG 180.0 179.8
HE1 NE1 CD1 HD1 360.0 0.1
NE1 CD1 HD1 CG 180.0 179.7
HD1 CD1 NE1 HE1 360.0 0.1
HD1 CD1 CG CB2 0.0 0.0
CG CB2 HB2 CA2 180.0 180.0
HB2 CB2 CA2 N2 185.0 180.1
HB2 CB2 CA2 C2 5.1 359.7
HA31 CA3 N3 C1 212.9 29.8
N3 CA3 HA31 C3 225.9 240.0
N3 CA3 HA31 HA32 112.9 120.0
HA31 CA3 C3 O3 32.5 240.0
HA31 CA3 C3 OXT 216.9 60.0
C3 CA3 HA31 HA32 247.0 240.0
HA32 CA3 N3 C1 342.1 149.8
N3 CA3 HA32 C3 130.2 120.0
N3 CA3 HA32 HA31 245.1 240.0
HA32 CA3 C3 O3 263.3 120.0
HA32 CA3 C3 OXT 87.7 300.0
C3 CA3 HA32 HA31 114.9 120.0
C1 CA1 HA1 N1 116.6 120.0
C1 CA1 HA1 CB1 234.2 240.0
N1 CA1 HA1 CB1 117.6 120.0
HA1 CA1 N1 H 89.8 56.1
HA1 CA1 N1 H2 209.8 180.0
HA1 CA1 CB1 OG1 311.3 55.0
HA1 CA1 CB1 HB11 71.3 175.0
HA1 CA1 CB1 HB12 189.8 295.0
H N1 CA1 CB1 207.3 176.0
H N1 CA1 HA1 89.8 56.1
CA1 N1 H H2 120.0 123.9
H2 N1 CA1 CB1 327.2 300.0
H2 N1 CA1 HA1 209.8 180.0
CA1 N1 H2 H 240.0 236.1
CA1 CB1 HB11 OG1 243.2 240.0
HB11 CB1 CA1 HA1 71.3 175.0
CA1 CB1 HB11 HB12 121.6 120.0
OG1 CB1 HB11 HB12 238.4 240.0
HB11 CB1 OG1 HG1 33.2 60.0
CA1 CB1 HB12 OG1 117.9 120.0
HB12 CB1 CA1 HA1 189.8 295.0
CA1 CB1 HB12 HB11 238.9 240.1
OG1 CB1 HB12 HB11 121.1 120.0
HB12 CB1 OG1 HG1 274.7 300.0
HG1 OG1 CB1 HB11 33.2 60.0
HG1 OG1 CB1 HB12 274.7 300.0