PDB Chemical Component SU6
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SU6
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O2 |
C1 |
1.263 |
1.208 |
O1 |
C1 |
1.263 |
1.342 |
C1 |
C2 |
1.496 |
1.507 |
C2 |
C3 |
1.495 |
1.530 |
C3 |
C4 |
1.497 |
1.507 |
C4 |
C7 |
1.397 |
1.396 |
C4 |
C5 |
1.389 |
1.356 |
C8 |
C7 |
1.488 |
1.508 |
C6 |
C5 |
1.490 |
1.508 |
C7 |
C9 |
1.392 |
1.386 |
C5 |
N1 |
1.338 |
1.357 |
C9 |
N1 |
1.336 |
1.379 |
C9 |
C10 |
1.502 |
1.411 |
C10 |
C11 |
1.505 |
1.382 |
O3 |
C12 |
1.372 |
1.218 |
C11 |
C12 |
1.403 |
1.468 |
C11 |
C13 |
1.416 |
1.480 |
C12 |
N2 |
1.335 |
1.344 |
C13 |
C18 |
1.403 |
1.390 |
C13 |
C14 |
1.378 |
1.402 |
C18 |
C17 |
1.391 |
1.380 |
N2 |
C14 |
1.354 |
1.390 |
C14 |
C15 |
1.404 |
1.391 |
C17 |
C16 |
1.390 |
1.385 |
C15 |
C16 |
1.385 |
1.380 |
N1 |
H1 |
1.000 |
0.969 |
O1 |
H2 |
0.950 |
0.967 |
C2 |
H3 |
1.100 |
1.090 |
N2 |
H4 |
1.000 |
0.969 |
C3 |
H5 |
1.100 |
1.090 |
C6 |
H6 |
1.099 |
1.090 |
C6 |
H7 |
1.100 |
1.090 |
C6 |
H8 |
1.100 |
1.090 |
C8 |
H9 |
1.100 |
1.090 |
C8 |
H10 |
1.100 |
1.090 |
C8 |
H11 |
1.100 |
1.089 |
C10 |
H12 |
1.080 |
1.079 |
C15 |
H15 |
1.080 |
1.079 |
C16 |
H16 |
1.080 |
1.080 |
C17 |
H17 |
1.080 |
1.080 |
C18 |
H18 |
1.080 |
1.081 |
C2 |
H19 |
1.100 |
1.090 |
C3 |
H20 |
1.100 |
1.089 |
Bond Angles for SU6
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
119.5 |
120.0 |
C1 |
C2 |
C3 |
116.9 |
109.5 |
C1 |
C2 |
H3 |
107.6 |
109.5 |
C1 |
C2 |
H19 |
107.6 |
109.4 |
C2 |
C3 |
C4 |
120.8 |
109.5 |
C3 |
C2 |
H3 |
107.6 |
109.5 |
C2 |
C3 |
H5 |
106.6 |
109.5 |
C3 |
C2 |
H19 |
107.6 |
109.5 |
C2 |
C3 |
H20 |
106.5 |
109.5 |
C3 |
C4 |
C7 |
127.4 |
126.1 |
C3 |
C4 |
C5 |
127.0 |
126.0 |
C4 |
C3 |
H5 |
106.6 |
109.4 |
C4 |
C3 |
H20 |
106.6 |
109.5 |
C5 |
C4 |
C7 |
105.5 |
107.9 |
C4 |
C7 |
C9 |
107.8 |
107.1 |
C8 |
C7 |
C9 |
126.2 |
126.5 |
C7 |
C9 |
C10 |
123.4 |
126.3 |
C5 |
N1 |
H1 |
124.9 |
125.7 |
C9 |
N1 |
H1 |
124.9 |
125.7 |
C9 |
C10 |
C11 |
120.8 |
120.0 |
C9 |
C10 |
H12 |
119.6 |
120.0 |
C10 |
C11 |
C12 |
132.3 |
127.5 |
C10 |
C11 |
C13 |
122.5 |
127.4 |
C11 |
C10 |
H12 |
119.6 |
120.0 |
O3 |
C12 |
C11 |
128.4 |
126.0 |
C12 |
C11 |
C13 |
105.1 |
105.1 |
C11 |
C13 |
C18 |
132.6 |
133.3 |
C11 |
C13 |
C14 |
107.7 |
106.3 |
C12 |
N2 |
C14 |
110.0 |
111.3 |
C12 |
N2 |
H4 |
125.0 |
124.4 |
C14 |
C13 |
C18 |
119.7 |
120.4 |
C13 |
C18 |
C17 |
120.2 |
119.8 |
C13 |
C18 |
H18 |
119.9 |
120.1 |
N2 |
C14 |
C13 |
108.1 |
109.2 |
C13 |
C14 |
C15 |
120.0 |
119.0 |
C18 |
C17 |
H17 |
120.0 |
120.0 |
N2 |
C14 |
C15 |
131.9 |
131.7 |
C14 |
N2 |
H4 |
125.0 |
124.3 |
C14 |
C15 |
C16 |
120.3 |
120.1 |
C14 |
C15 |
H15 |
119.9 |
119.9 |
C17 |
C16 |
H16 |
120.1 |
119.7 |
C16 |
C15 |
H15 |
119.8 |
120.0 |
C15 |
C16 |
H16 |
120.1 |
119.7 |
H3 |
C2 |
H19 |
109.5 |
109.4 |
H5 |
C3 |
H20 |
109.5 |
109.5 |
H6 |
C6 |
H7 |
109.5 |
109.5 |
H6 |
C6 |
H8 |
109.4 |
109.5 |
H7 |
C6 |
H8 |
109.5 |
109.4 |
H9 |
C8 |
H10 |
109.4 |
109.4 |
H9 |
C8 |
H11 |
109.5 |
109.5 |
H10 |
C8 |
H11 |
109.5 |
109.5 |
Torsion Angles for SU6
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2 |
C1 |
C2 |
C3 |
194.3 |
0.3 |
O2 |
C1 |
C2 |
H3 |
315.3 |
120.3 |
O2 |
C1 |
C2 |
H19 |
73.2 |
240.2 |
O1 |
C1 |
C2 |
C3 |
14.2 |
180.0 |
O1 |
C1 |
C2 |
H3 |
135.2 |
300.1 |
O1 |
C1 |
C2 |
H19 |
253.1 |
60.0 |
C1 |
C2 |
C3 |
C4 |
184.4 |
180.1 |
C3 |
C2 |
C1 |
H3 |
239.0 |
239.9 |
C1 |
C2 |
C3 |
H5 |
306.0 |
300.0 |
C3 |
C2 |
C1 |
H19 |
121.1 |
120.0 |
C1 |
C2 |
C3 |
H20 |
62.8 |
60.1 |
H3 |
C2 |
C1 |
H19 |
242.1 |
240.1 |
C1 |
C2 |
C3 |
H3 |
121.0 |
120.1 |
C1 |
C2 |
C3 |
H19 |
238.9 |
240.0 |
C2 |
C3 |
C4 |
C7 |
289.1 |
90.0 |
C2 |
C3 |
C4 |
C5 |
109.0 |
270.0 |
C4 |
C3 |
C2 |
H5 |
238.4 |
240.1 |
C4 |
C3 |
C2 |
H20 |
121.6 |
120.0 |
H3 |
C2 |
C3 |
H19 |
117.9 |
120.0 |
H5 |
C3 |
C2 |
H20 |
243.2 |
239.9 |
C4 |
C3 |
C2 |
H3 |
63.3 |
60.0 |
C2 |
C3 |
C4 |
H5 |
121.6 |
120.0 |
C4 |
C3 |
C2 |
H19 |
305.5 |
300.0 |
C2 |
C3 |
C4 |
H20 |
238.4 |
240.0 |
C5 |
C4 |
C3 |
C7 |
179.9 |
180.0 |
C3 |
C4 |
C7 |
C9 |
179.8 |
180.0 |
H5 |
C3 |
C4 |
H20 |
116.8 |
120.1 |
C3 |
C4 |
C7 |
C5 |
179.9 |
180.0 |
C7 |
C4 |
C3 |
H5 |
167.5 |
330.1 |
C7 |
C4 |
C3 |
H20 |
50.7 |
210.0 |
C8 |
C7 |
C4 |
C9 |
180.2 |
179.9 |
C4 |
C7 |
C9 |
C10 |
179.2 |
180.0 |
C3 |
C4 |
C5 |
C7 |
180.1 |
180.0 |
C5 |
C4 |
C3 |
H5 |
347.5 |
150.0 |
C5 |
C4 |
C3 |
H20 |
230.6 |
30.0 |
C5 |
C4 |
C7 |
C9 |
359.8 |
0.0 |
C4 |
C5 |
N1 |
H1 |
180.6 |
180.0 |
C4 |
C7 |
C8 |
C9 |
179.8 |
180.1 |
C8 |
C7 |
C9 |
C10 |
359.0 |
0.1 |
C6 |
C5 |
C4 |
C7 |
179.9 |
179.9 |
C6 |
C5 |
N1 |
H1 |
0.4 |
359.9 |
C7 |
C9 |
N1 |
H1 |
179.3 |
180.0 |
C7 |
C9 |
C10 |
C11 |
165.0 |
214.1 |
C7 |
C9 |
C10 |
H12 |
345.0 |
34.0 |
C9 |
N1 |
C5 |
H1 |
180.0 |
180.3 |
C5 |
N1 |
C9 |
H1 |
180.0 |
179.7 |
C10 |
C9 |
N1 |
H1 |
0.7 |
0.1 |
C9 |
C10 |
C11 |
C12 |
17.9 |
7.4 |
C9 |
C10 |
C11 |
C13 |
196.4 |
187.1 |
C11 |
C10 |
C9 |
H12 |
180.0 |
180.1 |
C9 |
C10 |
C11 |
H12 |
180.0 |
179.9 |
O3 |
C12 |
C11 |
C10 |
358.9 |
359.9 |
C12 |
C11 |
C10 |
C13 |
181.5 |
180.3 |
C10 |
C11 |
C13 |
C18 |
1.0 |
0.3 |
C10 |
C11 |
C13 |
C14 |
180.7 |
179.9 |
C10 |
C11 |
C12 |
O3 |
358.9 |
359.9 |
O3 |
C12 |
C11 |
C13 |
180.2 |
180.2 |
O3 |
C12 |
N2 |
C14 |
179.9 |
180.0 |
O3 |
C12 |
N2 |
H4 |
359.9 |
359.8 |
C10 |
C11 |
C12 |
C13 |
178.7 |
179.7 |
C12 |
C11 |
C10 |
H12 |
197.9 |
187.5 |
C12 |
C11 |
C13 |
C18 |
179.9 |
180.0 |
C12 |
C11 |
C13 |
C14 |
359.5 |
359.6 |
C11 |
C12 |
N2 |
C14 |
359.5 |
360.0 |
C11 |
C12 |
N2 |
H4 |
179.5 |
179.7 |
C10 |
C11 |
C13 |
C12 |
181.2 |
180.3 |
C13 |
C11 |
C10 |
H12 |
16.4 |
7.2 |
C14 |
C13 |
C11 |
C18 |
179.6 |
179.6 |
C11 |
C13 |
C18 |
C17 |
179.7 |
179.5 |
C11 |
C13 |
C18 |
H18 |
359.7 |
0.0 |
N2 |
C14 |
C13 |
C11 |
0.2 |
0.3 |
C11 |
C13 |
C14 |
C15 |
180.3 |
180.4 |
C12 |
N2 |
C14 |
C13 |
0.2 |
359.8 |
C12 |
N2 |
C14 |
C15 |
180.1 |
179.8 |
C14 |
N2 |
C12 |
H4 |
180.0 |
180.2 |
C11 |
C13 |
C18 |
C14 |
179.6 |
179.6 |
N2 |
C14 |
C13 |
C18 |
179.9 |
180.0 |
C18 |
C13 |
C14 |
C15 |
360.0 |
0.0 |
C13 |
C18 |
C17 |
H17 |
179.9 |
180.1 |
C11 |
C13 |
C14 |
C18 |
180.3 |
180.3 |
C14 |
C13 |
C18 |
C17 |
0.1 |
360.0 |
C14 |
C13 |
C18 |
H18 |
180.1 |
180.4 |
N2 |
C14 |
C13 |
C15 |
179.9 |
180.0 |
C13 |
C14 |
N2 |
H4 |
180.2 |
180.0 |
C13 |
C14 |
C15 |
C16 |
359.9 |
360.0 |
C13 |
C14 |
C15 |
H15 |
179.9 |
180.0 |
C13 |
C18 |
C17 |
H18 |
180.0 |
180.5 |
C18 |
C17 |
C16 |
H16 |
180.0 |
180.0 |
C11 |
C13 |
C14 |
N2 |
0.2 |
0.3 |
C12 |
N2 |
C14 |
H4 |
180.0 |
179.8 |
C13 |
C14 |
N2 |
C15 |
180.1 |
180.0 |
N2 |
C14 |
C15 |
C16 |
180.0 |
180.0 |
N2 |
C14 |
C15 |
H15 |
359.9 |
0.0 |
C15 |
C14 |
C13 |
C18 |
360.0 |
0.0 |
N2 |
C14 |
C15 |
C13 |
180.1 |
180.0 |
C15 |
C14 |
N2 |
H4 |
0.1 |
0.0 |
C16 |
C15 |
C14 |
H15 |
180.0 |
180.0 |
C14 |
C15 |
C16 |
H16 |
180.1 |
180.0 |
C13 |
C18 |
C17 |
C16 |
359.9 |
0.0 |
C17 |
C16 |
C15 |
H15 |
180.2 |
180.0 |
C15 |
C16 |
C17 |
H16 |
180.0 |
179.9 |
C14 |
C15 |
C16 |
H15 |
180.0 |
180.0 |
C17 |
C16 |
C15 |
H16 |
180.0 |
180.1 |
H2 |
O1 |
C1 |
C2 |
180.1 |
179.9 |
C1 |
C2 |
H3 |
C3 |
233.3 |
239.9 |
C1 |
C2 |
H3 |
H19 |
116.6 |
119.9 |
H3 |
C2 |
C3 |
C4 |
63.3 |
60.0 |
H3 |
C2 |
C3 |
H5 |
184.9 |
179.9 |
C3 |
C2 |
H3 |
H19 |
243.4 |
240.0 |
H3 |
C2 |
C3 |
H20 |
301.7 |
300.0 |
C12 |
N2 |
H4 |
C14 |
180.0 |
180.3 |
H4 |
N2 |
C14 |
C13 |
180.2 |
180.0 |
H4 |
N2 |
C14 |
C15 |
0.1 |
0.0 |
C2 |
C3 |
H5 |
C4 |
229.7 |
240.0 |
H5 |
C3 |
C2 |
H3 |
184.9 |
179.9 |
H5 |
C3 |
C2 |
H19 |
67.1 |
60.0 |
C2 |
C3 |
H5 |
H20 |
114.8 |
120.0 |
H5 |
C3 |
C4 |
C7 |
167.5 |
330.1 |
H5 |
C3 |
C4 |
C5 |
347.5 |
150.0 |
C4 |
C3 |
H5 |
H20 |
245.1 |
240.0 |
H7 |
C6 |
H6 |
H8 |
120.0 |
120.0 |
H6 |
C6 |
H7 |
H8 |
240.0 |
240.0 |
H6 |
C6 |
H8 |
H7 |
120.0 |
120.1 |
H9 |
C8 |
C7 |
C9 |
270.1 |
270.0 |
H10 |
C8 |
H9 |
H11 |
120.0 |
120.0 |
H10 |
C8 |
C7 |
C9 |
30.1 |
29.9 |
H9 |
C8 |
H10 |
H11 |
240.0 |
240.0 |
H11 |
C8 |
C7 |
C9 |
150.1 |
150.0 |
H9 |
C8 |
H11 |
H10 |
120.0 |
120.0 |
C9 |
C10 |
H12 |
C11 |
180.0 |
180.1 |
H12 |
C10 |
C11 |
C12 |
197.9 |
187.5 |
H12 |
C10 |
C11 |
C13 |
16.4 |
7.2 |
C14 |
C15 |
H15 |
C16 |
180.0 |
180.0 |
H15 |
C15 |
C16 |
H16 |
0.1 |
359.9 |
H16 |
C16 |
C15 |
H15 |
0.1 |
359.9 |
H17 |
C17 |
C16 |
H16 |
0.0 |
360.0 |
C13 |
C18 |
H18 |
C17 |
180.0 |
179.5 |
H18 |
C18 |
C17 |
H17 |
359.9 |
359.6 |
C1 |
C2 |
H19 |
C3 |
126.8 |
120.0 |
C1 |
C2 |
H19 |
H3 |
243.4 |
240.0 |
H19 |
C2 |
C3 |
C4 |
305.5 |
300.0 |
C3 |
C2 |
H19 |
H3 |
116.6 |
120.0 |
H19 |
C2 |
C3 |
H5 |
67.1 |
60.0 |
H19 |
C2 |
C3 |
H20 |
183.9 |
180.0 |
C2 |
C3 |
H20 |
C4 |
130.3 |
120.0 |
H20 |
C3 |
C2 |
H3 |
301.7 |
300.0 |
C2 |
C3 |
H20 |
H5 |
245.1 |
240.0 |
H20 |
C3 |
C2 |
H19 |
183.9 |
180.0 |
H20 |
C3 |
C4 |
C7 |
50.7 |
210.0 |
H20 |
C3 |
C4 |
C5 |
230.6 |
30.0 |
C4 |
C3 |
H20 |
H5 |
114.9 |
120.0 |