PDB Chemical Component STT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for STT
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CAG |
CBK |
1.404 |
1.359 |
SBA |
CBK |
1.699 |
1.774 |
SBA |
CBJ |
1.668 |
1.772 |
CBK |
CBI |
1.402 |
1.465 |
CBJ |
SAE |
1.734 |
1.713 |
CBJ |
NBM |
1.347 |
1.338 |
CBI |
OAA |
1.247 |
1.218 |
CBI |
NBM |
1.380 |
1.323 |
NBM |
CAV |
1.477 |
1.464 |
CAV |
CAX |
1.525 |
1.530 |
CAX |
SBN |
1.809 |
1.814 |
OAD |
SBN |
1.407 |
1.421 |
SBN |
OAC |
1.450 |
1.421 |
SBN |
OAB |
1.450 |
1.522 |
CAX |
H1 |
1.100 |
1.091 |
CAX |
H2 |
1.100 |
1.089 |
CAV |
H3 |
1.100 |
1.090 |
CAV |
H4 |
1.100 |
1.089 |
CAG |
H5 |
1.080 |
1.079 |
CAG |
C5 |
|
1.467 |
C5 |
C1 |
|
1.468 |
C1 |
N2 |
|
1.314 |
N2 |
N1 |
|
1.398 |
N1 |
C4 |
|
1.346 |
C4 |
C5 |
|
1.384 |
N1 |
C2 |
|
1.401 |
C2 |
C3 |
|
1.388 |
C3 |
C6 |
|
1.381 |
C6 |
C7 |
|
1.383 |
C7 |
C8 |
|
1.383 |
C8 |
C9 |
|
1.382 |
C9 |
C2 |
|
1.388 |
C1 |
C10 |
|
1.482 |
C10 |
C11 |
|
1.395 |
C11 |
C12 |
|
1.378 |
C12 |
C13 |
|
1.389 |
C13 |
C14 |
|
1.389 |
C14 |
C15 |
|
1.379 |
C15 |
C10 |
|
1.394 |
C13 |
O1 |
|
1.358 |
O1 |
C17 |
|
1.359 |
C17 |
C18 |
|
1.390 |
C18 |
C19 |
|
1.383 |
C19 |
C20 |
|
1.382 |
C20 |
C21 |
|
1.383 |
C21 |
C22 |
|
1.382 |
C22 |
C17 |
|
1.386 |
C18 |
F1 |
|
1.351 |
OAB |
H8 |
0.950 |
0.968 |
C4 |
H6 |
|
1.079 |
C3 |
H7 |
|
1.080 |
C6 |
H9 |
|
1.080 |
C7 |
H10 |
|
1.080 |
C8 |
H11 |
|
1.080 |
C9 |
H12 |
|
1.081 |
C11 |
H13 |
|
1.080 |
C12 |
H14 |
|
1.080 |
C14 |
H15 |
|
1.079 |
C15 |
H16 |
|
1.080 |
C19 |
H17 |
|
1.080 |
C20 |
H18 |
|
1.080 |
C21 |
H19 |
|
1.080 |
C22 |
H20 |
|
1.080 |
Bond Angles for STT
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
NBM |
CAV |
H3 |
109.0 |
109.4 |
NBM |
CAV |
H4 |
109.0 |
109.5 |
CAV |
CAX |
H1 |
108.7 |
109.4 |
CAV |
CAX |
H2 |
108.7 |
109.5 |
OAD |
SBN |
OAC |
118.6 |
121.0 |
OAD |
SBN |
OAB |
117.6 |
104.3 |
OAB |
SBN |
OAC |
119.3 |
104.3 |
SBN |
OAB |
H8 |
109.5 |
114.0 |
H1 |
CAX |
H2 |
109.5 |
109.5 |
H3 |
CAV |
H4 |
109.4 |
109.5 |
H5 |
CAG |
C5 |
|
120.0 |
CAG |
C5 |
C1 |
|
126.8 |
C5 |
C1 |
N2 |
|
107.1 |
C5 |
C1 |
C10 |
|
126.4 |
C1 |
N2 |
N1 |
|
109.1 |
N2 |
C1 |
C10 |
|
126.5 |
N2 |
N1 |
C4 |
|
109.7 |
N2 |
N1 |
C2 |
|
125.2 |
C4 |
N1 |
C2 |
|
125.1 |
N1 |
C4 |
H6 |
|
126.1 |
N1 |
C2 |
C3 |
|
120.0 |
C2 |
C3 |
C6 |
|
119.9 |
C2 |
C3 |
H7 |
|
120.1 |
C3 |
C6 |
C7 |
|
120.1 |
C6 |
C3 |
H7 |
|
120.0 |
C3 |
C6 |
H9 |
|
120.0 |
C6 |
C7 |
C8 |
|
120.1 |
C7 |
C6 |
H9 |
|
119.9 |
C6 |
C7 |
H10 |
|
120.0 |
C7 |
C8 |
C9 |
|
120.0 |
C8 |
C7 |
H10 |
|
119.9 |
C7 |
C8 |
H11 |
|
120.0 |
C9 |
C8 |
H11 |
|
120.0 |
C8 |
C9 |
H12 |
|
120.0 |
C1 |
C10 |
C11 |
|
120.0 |
C10 |
C11 |
C12 |
|
119.9 |
C10 |
C11 |
H13 |
|
120.0 |
C11 |
C12 |
C13 |
|
120.1 |
C12 |
C11 |
H13 |
|
120.1 |
C11 |
C12 |
H14 |
|
119.9 |
C12 |
C13 |
C14 |
|
120.2 |
C12 |
C13 |
O1 |
|
119.9 |
C13 |
C12 |
H14 |
|
120.0 |
C13 |
C14 |
C15 |
|
120.1 |
C14 |
C13 |
O1 |
|
119.9 |
C13 |
C14 |
H15 |
|
120.0 |
C15 |
C14 |
H15 |
|
120.0 |
C14 |
C15 |
H16 |
|
120.0 |
C13 |
O1 |
C17 |
|
118.0 |
O1 |
C17 |
C18 |
|
120.0 |
C17 |
C18 |
C19 |
|
119.9 |
C17 |
C18 |
F1 |
|
120.1 |
C18 |
C19 |
C20 |
|
120.1 |
C19 |
C18 |
F1 |
|
120.1 |
C18 |
C19 |
H17 |
|
119.9 |
C19 |
C20 |
C21 |
|
120.1 |
C20 |
C19 |
H17 |
|
120.0 |
C19 |
C20 |
H18 |
|
119.9 |
C20 |
C21 |
C22 |
|
120.1 |
C21 |
C20 |
H18 |
|
120.0 |
C20 |
C21 |
H19 |
|
119.9 |
C22 |
C21 |
H19 |
|
120.0 |
C21 |
C22 |
H20 |
|
120.0 |
Torsion Angles for STT
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CBJ |
NBM |
CAV |
H3 |
269.3 |
149.7 |
CBJ |
NBM |
CAV |
H4 |
28.7 |
29.7 |
CBI |
NBM |
CAV |
H3 |
87.9 |
330.0 |
CBI |
NBM |
CAV |
H4 |
207.3 |
210.0 |
NBM |
CAV |
CAX |
H1 |
301.0 |
60.1 |
NBM |
CAV |
CAX |
H2 |
60.1 |
300.1 |
H3 |
CAV |
NBM |
H4 |
240.6 |
120.0 |
H1 |
CAX |
CAV |
H2 |
240.9 |
120.0 |
CAX |
SBN |
OAB |
H8 |
102.2 |
180.1 |
OAB |
SBN |
OAD |
OAC |
204.2 |
243.2 |
OAD |
SBN |
OAB |
H8 |
0.0 |
64.0 |
OAD |
SBN |
OAC |
OAB |
204.6 |
243.3 |
OAC |
SBN |
OAB |
H8 |
204.3 |
296.1 |
OAD |
SBN |
OAB |
OAC |
155.7 |
127.8 |
CAV |
CAX |
H1 |
H2 |
118.7 |
239.9 |
CAV |
CAX |
H2 |
H1 |
241.3 |
120.0 |
NBM |
CAV |
H3 |
H4 |
119.1 |
240.0 |
H3 |
CAV |
CAX |
H1 |
180.7 |
180.0 |
H3 |
CAV |
CAX |
H2 |
299.8 |
60.0 |
NBM |
CAV |
H4 |
H3 |
240.9 |
120.0 |
H4 |
CAV |
CAX |
H1 |
61.3 |
300.0 |
H4 |
CAV |
CAX |
H2 |
180.4 |
180.0 |
H5 |
CAG |
C5 |
C1 |
|
325.7 |
CAG |
C5 |
C1 |
N2 |
|
180.0 |
CAG |
C5 |
C1 |
C10 |
|
359.9 |
C5 |
C1 |
N2 |
N1 |
|
0.0 |
N2 |
C1 |
C5 |
C10 |
|
180.1 |
C5 |
C1 |
C10 |
C11 |
|
145.0 |
C5 |
C1 |
N2 |
C10 |
|
179.9 |
C1 |
N2 |
N1 |
C4 |
|
359.7 |
C1 |
N2 |
N1 |
C2 |
|
180.0 |
N2 |
C1 |
C10 |
C11 |
|
325.0 |
N1 |
N2 |
C1 |
C10 |
|
180.1 |
C4 |
N1 |
N2 |
C2 |
|
179.7 |
N2 |
N1 |
C4 |
H6 |
|
180.0 |
N2 |
N1 |
C2 |
C3 |
|
360.0 |
N2 |
N1 |
C4 |
C2 |
|
180.3 |
C4 |
N1 |
C2 |
C3 |
|
180.4 |
C4 |
C5 |
C1 |
C10 |
|
180.2 |
N2 |
N1 |
C2 |
C4 |
|
179.6 |
C2 |
N1 |
C4 |
H6 |
|
359.7 |
N1 |
C2 |
C3 |
C6 |
|
180.0 |
N1 |
C2 |
C3 |
H7 |
|
360.0 |
C2 |
C3 |
C6 |
C7 |
|
360.0 |
C6 |
C3 |
C2 |
H7 |
|
180.1 |
C2 |
C3 |
C6 |
H9 |
|
180.0 |
C2 |
C3 |
C6 |
H7 |
|
179.9 |
C3 |
C6 |
C7 |
C8 |
|
0.1 |
C7 |
C6 |
C3 |
H9 |
|
179.9 |
C3 |
C6 |
C7 |
H10 |
|
180.0 |
C7 |
C6 |
C3 |
H7 |
|
180.0 |
C3 |
C6 |
C7 |
H9 |
|
180.1 |
C6 |
C7 |
C8 |
C9 |
|
359.6 |
C8 |
C7 |
C6 |
H10 |
|
180.1 |
C6 |
C7 |
C8 |
H11 |
|
179.9 |
C8 |
C7 |
C6 |
H9 |
|
180.0 |
C6 |
C7 |
C8 |
H10 |
|
179.9 |
C9 |
C8 |
C7 |
H11 |
|
179.7 |
C7 |
C8 |
C9 |
H12 |
|
180.0 |
C9 |
C8 |
C7 |
H10 |
|
179.7 |
C7 |
C8 |
C9 |
H11 |
|
180.3 |
C9 |
C2 |
C3 |
H7 |
|
180.2 |
C5 |
C1 |
C10 |
N2 |
|
180.1 |
C10 |
C1 |
N2 |
N1 |
|
180.1 |
C1 |
C10 |
C11 |
C12 |
|
180.0 |
C1 |
C10 |
C11 |
H13 |
|
359.9 |
C10 |
C11 |
C12 |
C13 |
|
360.0 |
C12 |
C11 |
C10 |
H13 |
|
180.0 |
C10 |
C11 |
C12 |
H14 |
|
179.9 |
C10 |
C11 |
C12 |
H13 |
|
180.0 |
C11 |
C12 |
C13 |
C14 |
|
0.0 |
C11 |
C12 |
C13 |
O1 |
|
180.0 |
C13 |
C12 |
C11 |
H14 |
|
180.0 |
C13 |
C12 |
C11 |
H13 |
|
180.0 |
C11 |
C12 |
C13 |
H14 |
|
180.0 |
C12 |
C13 |
C14 |
C15 |
|
359.8 |
C14 |
C13 |
C12 |
O1 |
|
180.0 |
C12 |
C13 |
C14 |
H15 |
|
180.0 |
C12 |
C13 |
O1 |
C17 |
|
89.3 |
C12 |
C13 |
C14 |
O1 |
|
180.0 |
C14 |
C13 |
C12 |
H14 |
|
180.0 |
C15 |
C14 |
C13 |
H15 |
|
179.7 |
C13 |
C14 |
C15 |
H16 |
|
180.1 |
C14 |
C13 |
O1 |
C17 |
|
269.3 |
C15 |
C14 |
C13 |
O1 |
|
179.8 |
C13 |
C14 |
C15 |
H15 |
|
180.3 |
C15 |
C10 |
C11 |
H13 |
|
180.2 |
C12 |
C13 |
O1 |
C14 |
|
180.0 |
O1 |
C13 |
C12 |
H14 |
|
0.0 |
O1 |
C13 |
C14 |
C15 |
|
179.8 |
O1 |
C13 |
C14 |
H15 |
|
0.0 |
C13 |
O1 |
C17 |
C18 |
|
181.3 |
O1 |
C17 |
C18 |
C19 |
|
180.0 |
O1 |
C17 |
C18 |
F1 |
|
359.9 |
C17 |
C18 |
C19 |
C20 |
|
360.0 |
C19 |
C18 |
C17 |
F1 |
|
180.1 |
C17 |
C18 |
C19 |
H17 |
|
180.0 |
C17 |
C18 |
C19 |
F1 |
|
179.9 |
C18 |
C19 |
C20 |
C21 |
|
0.0 |
C20 |
C19 |
C18 |
H17 |
|
180.0 |
C18 |
C19 |
C20 |
H18 |
|
180.0 |
C20 |
C19 |
C18 |
F1 |
|
180.0 |
C18 |
C19 |
C20 |
H17 |
|
180.0 |
C19 |
C20 |
C21 |
C22 |
|
359.7 |
C21 |
C20 |
C19 |
H18 |
|
180.0 |
C19 |
C20 |
C21 |
H19 |
|
180.0 |
C21 |
C20 |
C19 |
H17 |
|
180.0 |
C19 |
C20 |
C21 |
H18 |
|
180.0 |
C22 |
C21 |
C20 |
H19 |
|
179.7 |
C20 |
C21 |
C22 |
H20 |
|
180.0 |
C22 |
C21 |
C20 |
H18 |
|
179.7 |
C20 |
C21 |
C22 |
H19 |
|
180.3 |
C22 |
C17 |
C18 |
F1 |
|
180.2 |
C17 |
C18 |
F1 |
C19 |
|
180.1 |
F1 |
C18 |
C19 |
C20 |
|
180.0 |
F1 |
C18 |
C19 |
H17 |
|
0.1 |
H8 |
OAB |
SBN |
OAC |
204.3 |
296.1 |
H6 |
C4 |
N1 |
C2 |
|
359.7 |
C2 |
C3 |
H7 |
C6 |
|
180.1 |
H7 |
C3 |
C6 |
C7 |
|
180.0 |
H7 |
C3 |
C6 |
H9 |
|
0.1 |
C3 |
C6 |
H9 |
C7 |
|
179.9 |
H9 |
C6 |
C3 |
H7 |
|
0.1 |
H9 |
C6 |
C7 |
C8 |
|
180.0 |
H9 |
C6 |
C7 |
H10 |
|
359.9 |
C6 |
C7 |
H10 |
C8 |
|
180.1 |
H10 |
C7 |
C6 |
H9 |
|
359.9 |
H10 |
C7 |
C8 |
C9 |
|
179.7 |
H10 |
C7 |
C8 |
H11 |
|
0.0 |
C7 |
C8 |
H11 |
C9 |
|
179.7 |
H11 |
C8 |
C7 |
H10 |
|
0.0 |
H11 |
C8 |
C9 |
H12 |
|
359.7 |
H12 |
C9 |
C8 |
H11 |
|
359.7 |
C10 |
C11 |
H13 |
C12 |
|
180.0 |
H13 |
C11 |
C12 |
C13 |
|
180.0 |
H13 |
C11 |
C12 |
H14 |
|
360.0 |
C11 |
C12 |
H14 |
C13 |
|
180.0 |
H14 |
C12 |
C11 |
H13 |
|
360.0 |
H14 |
C12 |
C13 |
C14 |
|
180.0 |
H14 |
C12 |
C13 |
O1 |
|
0.0 |
C13 |
C14 |
H15 |
C15 |
|
179.7 |
H15 |
C14 |
C13 |
O1 |
|
0.0 |
H15 |
C14 |
C15 |
H16 |
|
359.8 |
H16 |
C15 |
C14 |
H15 |
|
359.8 |
C18 |
C19 |
H17 |
C20 |
|
180.0 |
H17 |
C19 |
C18 |
F1 |
|
0.1 |
H17 |
C19 |
C20 |
C21 |
|
180.0 |
H17 |
C19 |
C20 |
H18 |
|
360.0 |
C19 |
C20 |
H18 |
C21 |
|
180.0 |
H18 |
C20 |
C19 |
H17 |
|
360.0 |
H18 |
C20 |
C21 |
C22 |
|
179.7 |
H18 |
C20 |
C21 |
H19 |
|
0.0 |
C20 |
C21 |
H19 |
C22 |
|
179.7 |
H19 |
C21 |
C20 |
H18 |
|
0.0 |
H19 |
C21 |
C22 |
H20 |
|
359.7 |
H20 |
C22 |
C21 |
H19 |
|
359.7 |