PDB Chemical Component STC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for STC
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.404 |
1.397 |
N1 |
S13 |
1.723 |
1.655 |
N1 |
HN11 |
1.020 |
0.970 |
C2 |
C3 |
1.412 |
1.389 |
C2 |
C4 |
1.418 |
1.388 |
C3 |
C5 |
1.411 |
1.381 |
C3 |
H31 |
1.103 |
1.080 |
C4 |
C6 |
1.411 |
1.381 |
C4 |
H41 |
1.103 |
1.080 |
C5 |
C7 |
1.413 |
1.383 |
C5 |
H51 |
1.103 |
1.081 |
C6 |
C7 |
1.414 |
1.383 |
C6 |
H61 |
1.103 |
1.081 |
C7 |
CL8 |
1.732 |
1.736 |
S13 |
C15 |
1.854 |
1.761 |
S13 |
O16 |
1.441 |
1.420 |
S13 |
O17 |
1.435 |
1.421 |
C15 |
C18 |
1.408 |
1.387 |
C15 |
C19 |
1.403 |
1.372 |
C18 |
S20 |
1.427 |
1.784 |
C18 |
C21 |
1.495 |
1.463 |
C19 |
C22 |
1.398 |
1.360 |
C19 |
H191 |
1.103 |
1.079 |
S20 |
C22 |
1.405 |
1.733 |
C21 |
O23 |
1.330 |
1.348 |
C21 |
O24 |
1.216 |
1.217 |
C22 |
H221 |
1.104 |
1.080 |
O23 |
H231 |
0.950 |
0.967 |
Bond Angles for STC
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
S13 |
118.2 |
120.0 |
C2 |
N1 |
HN11 |
109.1 |
120.0 |
N1 |
C2 |
C3 |
119.5 |
120.1 |
N1 |
C2 |
C4 |
120.0 |
120.1 |
S13 |
N1 |
HN11 |
109.0 |
120.0 |
N1 |
S13 |
C15 |
110.1 |
107.4 |
N1 |
S13 |
O16 |
108.1 |
105.8 |
N1 |
S13 |
O17 |
109.4 |
105.8 |
C3 |
C2 |
C4 |
120.5 |
119.8 |
C2 |
C3 |
C5 |
119.8 |
120.0 |
C2 |
C3 |
H31 |
120.1 |
120.0 |
C2 |
C4 |
C6 |
119.6 |
119.9 |
C2 |
C4 |
H41 |
120.5 |
120.0 |
C5 |
C3 |
H31 |
120.0 |
120.0 |
C3 |
C5 |
C7 |
119.7 |
120.0 |
C3 |
C5 |
H51 |
120.1 |
119.9 |
C6 |
C4 |
H41 |
120.0 |
120.1 |
C4 |
C6 |
C7 |
119.8 |
120.1 |
C4 |
C6 |
H61 |
120.0 |
120.0 |
C7 |
C5 |
H51 |
120.2 |
120.0 |
C5 |
C7 |
C6 |
120.6 |
120.1 |
C5 |
C7 |
CL8 |
119.4 |
119.9 |
C7 |
C6 |
H61 |
120.2 |
120.0 |
C6 |
C7 |
CL8 |
120.0 |
120.0 |
C15 |
S13 |
O16 |
110.2 |
105.8 |
C15 |
S13 |
O17 |
109.2 |
105.8 |
S13 |
C15 |
C18 |
128.0 |
121.5 |
S13 |
C15 |
C19 |
124.4 |
121.4 |
O16 |
S13 |
O17 |
109.9 |
125.3 |
C18 |
C15 |
C19 |
107.6 |
117.1 |
C15 |
C18 |
S20 |
107.9 |
101.9 |
C15 |
C18 |
C21 |
127.7 |
129.1 |
C15 |
C19 |
C22 |
108.9 |
119.2 |
C15 |
C19 |
H191 |
125.7 |
120.4 |
S20 |
C18 |
C21 |
124.4 |
129.1 |
C18 |
S20 |
C22 |
107.4 |
98.7 |
C18 |
C21 |
O23 |
121.6 |
120.1 |
C18 |
C21 |
O24 |
118.7 |
120.0 |
C22 |
C19 |
H191 |
125.4 |
120.4 |
C19 |
C22 |
S20 |
108.2 |
103.2 |
C19 |
C22 |
H221 |
125.7 |
128.4 |
S20 |
C22 |
H221 |
126.1 |
128.4 |
O23 |
C21 |
O24 |
119.8 |
120.0 |
C21 |
O23 |
H231 |
121.5 |
120.1 |
Torsion Angles for STC
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
S13 |
N1 |
C2 |
HN11 |
125.3 |
180.1 |
C2 |
N1 |
S13 |
C15 |
81.5 |
294.5 |
C2 |
N1 |
S13 |
O16 |
201.8 |
181.9 |
C2 |
N1 |
S13 |
O17 |
321.5 |
47.1 |
C3 |
C2 |
N1 |
C4 |
179.8 |
180.2 |
N1 |
C2 |
C3 |
C5 |
180.8 |
180.1 |
N1 |
C2 |
C3 |
H31 |
0.8 |
0.0 |
N1 |
C2 |
C4 |
C6 |
179.3 |
179.7 |
N1 |
C2 |
C4 |
H41 |
359.3 |
0.1 |
C2 |
N1 |
S13 |
HN11 |
234.7 |
179.9 |
S13 |
N1 |
C2 |
C3 |
268.1 |
185.4 |
S13 |
N1 |
C2 |
C4 |
88.4 |
5.3 |
C15 |
S13 |
N1 |
O16 |
239.6 |
112.6 |
C15 |
S13 |
N1 |
O17 |
120.0 |
247.4 |
N1 |
S13 |
C15 |
C18 |
53.2 |
296.0 |
N1 |
S13 |
C15 |
C19 |
233.2 |
116.6 |
O16 |
S13 |
N1 |
O17 |
240.3 |
134.8 |
C2 |
N1 |
HN11 |
S13 |
130.4 |
180.1 |
HN11 |
N1 |
C2 |
C3 |
142.9 |
5.3 |
HN11 |
N1 |
C2 |
C4 |
323.1 |
185.2 |
HN11 |
N1 |
S13 |
C15 |
206.8 |
114.6 |
HN11 |
N1 |
S13 |
O16 |
327.1 |
2.0 |
HN11 |
N1 |
S13 |
O17 |
86.8 |
227.2 |
C3 |
C2 |
N1 |
S13 |
268.1 |
185.4 |
C3 |
C2 |
N1 |
HN11 |
142.9 |
5.3 |
N1 |
C2 |
C3 |
C4 |
180.2 |
179.8 |
C3 |
C2 |
C4 |
C6 |
359.5 |
359.5 |
C3 |
C2 |
C4 |
H41 |
179.5 |
180.0 |
C5 |
C3 |
C2 |
H31 |
180.0 |
180.0 |
C2 |
C3 |
C5 |
C7 |
359.9 |
360.0 |
C2 |
C3 |
C5 |
H51 |
180.0 |
180.0 |
C4 |
C2 |
N1 |
S13 |
88.4 |
5.3 |
C4 |
C2 |
N1 |
HN11 |
323.1 |
185.2 |
N1 |
C2 |
C4 |
C3 |
179.8 |
180.2 |
C4 |
C2 |
C3 |
C5 |
0.6 |
0.2 |
C4 |
C2 |
C3 |
H31 |
180.6 |
180.2 |
C6 |
C4 |
C2 |
H41 |
180.0 |
179.5 |
C2 |
C4 |
C6 |
C7 |
359.9 |
0.5 |
C2 |
C4 |
C6 |
H61 |
180.0 |
180.2 |
C5 |
C3 |
C2 |
C4 |
0.6 |
0.2 |
C2 |
C3 |
C5 |
H31 |
180.0 |
180.0 |
C7 |
C5 |
C3 |
H51 |
180.0 |
179.9 |
C3 |
C5 |
C7 |
C6 |
359.5 |
0.1 |
C3 |
C5 |
C7 |
CL8 |
179.1 |
180.0 |
H31 |
C3 |
C2 |
C4 |
180.6 |
180.2 |
C2 |
C3 |
H31 |
C5 |
180.0 |
180.0 |
H31 |
C3 |
C5 |
C7 |
179.9 |
180.0 |
H31 |
C3 |
C5 |
H51 |
359.9 |
0.1 |
C2 |
C4 |
C6 |
H41 |
180.0 |
180.5 |
C5 |
C7 |
C6 |
C4 |
0.6 |
359.7 |
C7 |
C6 |
C4 |
H61 |
180.0 |
180.3 |
C4 |
C6 |
C7 |
CL8 |
180.9 |
179.7 |
C2 |
C4 |
H41 |
C6 |
180.0 |
179.5 |
H41 |
C4 |
C6 |
C7 |
179.9 |
180.1 |
H41 |
C4 |
C6 |
H61 |
359.9 |
359.8 |
C7 |
C5 |
C3 |
H31 |
179.9 |
180.0 |
C3 |
C5 |
C7 |
H51 |
180.0 |
180.1 |
C4 |
C6 |
C7 |
C5 |
0.6 |
359.7 |
C5 |
C7 |
C6 |
H61 |
180.6 |
180.0 |
C6 |
C7 |
C5 |
CL8 |
180.4 |
180.1 |
H51 |
C5 |
C3 |
H31 |
359.9 |
0.1 |
C3 |
C5 |
H51 |
C7 |
180.0 |
179.9 |
H51 |
C5 |
C7 |
C6 |
179.5 |
180.0 |
H51 |
C5 |
C7 |
CL8 |
359.1 |
359.9 |
C7 |
C6 |
C4 |
H41 |
179.9 |
180.1 |
C4 |
C6 |
C7 |
H61 |
180.0 |
179.7 |
C6 |
C7 |
C5 |
H51 |
179.5 |
180.0 |
C5 |
C7 |
C6 |
CL8 |
179.6 |
179.9 |
H61 |
C6 |
C4 |
H41 |
359.9 |
359.8 |
C4 |
C6 |
H61 |
C7 |
180.0 |
180.3 |
H61 |
C6 |
C7 |
CL8 |
0.9 |
0.1 |
CL8 |
C7 |
C5 |
H51 |
359.1 |
359.9 |
C5 |
C7 |
CL8 |
C6 |
180.4 |
180.1 |
CL8 |
C7 |
C6 |
H61 |
0.9 |
0.1 |
C15 |
S13 |
N1 |
HN11 |
206.8 |
114.6 |
N1 |
S13 |
C15 |
O16 |
119.1 |
247.4 |
N1 |
S13 |
C15 |
O17 |
239.9 |
112.6 |
O16 |
S13 |
C15 |
O17 |
120.8 |
225.2 |
C18 |
C15 |
S13 |
C19 |
179.9 |
179.4 |
S13 |
C15 |
C18 |
S20 |
179.9 |
180.1 |
S13 |
C15 |
C18 |
C21 |
359.8 |
0.3 |
S13 |
C15 |
C19 |
C22 |
180.0 |
180.0 |
S13 |
C15 |
C19 |
H191 |
0.0 |
359.7 |
O16 |
S13 |
N1 |
HN11 |
327.1 |
2.0 |
N1 |
S13 |
O16 |
C15 |
239.7 |
113.7 |
N1 |
S13 |
O16 |
O17 |
119.4 |
236.9 |
C15 |
S13 |
O16 |
O17 |
239.7 |
123.1 |
O16 |
S13 |
C15 |
C18 |
294.0 |
48.7 |
O16 |
S13 |
C15 |
C19 |
114.1 |
229.3 |
O17 |
S13 |
N1 |
HN11 |
86.8 |
227.2 |
N1 |
S13 |
O17 |
C15 |
120.5 |
246.3 |
N1 |
S13 |
O17 |
O16 |
241.4 |
123.2 |
C15 |
S13 |
O17 |
O16 |
120.9 |
236.9 |
O17 |
S13 |
C15 |
C18 |
173.3 |
183.4 |
O17 |
S13 |
C15 |
C19 |
353.4 |
4.0 |
C18 |
C15 |
S13 |
O16 |
294.0 |
48.7 |
C18 |
C15 |
S13 |
O17 |
173.3 |
183.4 |
S13 |
C15 |
C18 |
C19 |
180.1 |
180.6 |
C18 |
C15 |
C19 |
C22 |
0.1 |
0.6 |
C18 |
C15 |
C19 |
H191 |
180.1 |
180.3 |
S20 |
C18 |
C15 |
C21 |
180.0 |
179.8 |
C15 |
C18 |
S20 |
C22 |
0.3 |
0.2 |
C15 |
C18 |
C21 |
O23 |
359.8 |
185.7 |
C15 |
C18 |
C21 |
O24 |
179.7 |
5.7 |
C19 |
C15 |
S13 |
O16 |
114.1 |
229.3 |
C19 |
C15 |
S13 |
O17 |
353.4 |
4.0 |
S13 |
C15 |
C19 |
C18 |
179.9 |
179.4 |
C19 |
C15 |
C18 |
S20 |
359.8 |
359.5 |
C19 |
C15 |
C18 |
C21 |
179.8 |
179.7 |
C22 |
C19 |
C15 |
H191 |
180.0 |
180.3 |
C15 |
C19 |
C22 |
S20 |
0.1 |
359.7 |
C15 |
C19 |
C22 |
H221 |
180.1 |
179.7 |
S20 |
C18 |
C15 |
C19 |
359.8 |
359.5 |
C15 |
C18 |
S20 |
C21 |
180.0 |
180.2 |
S20 |
C18 |
C21 |
O23 |
179.8 |
6.0 |
S20 |
C18 |
C21 |
O24 |
359.7 |
186.0 |
C19 |
C22 |
S20 |
C18 |
359.7 |
0.0 |
C18 |
S20 |
C22 |
H221 |
179.8 |
180.0 |
C21 |
C18 |
C15 |
C19 |
179.8 |
179.7 |
C15 |
C18 |
C21 |
S20 |
180.0 |
179.7 |
C21 |
C18 |
S20 |
C22 |
180.3 |
180.0 |
O23 |
C21 |
C18 |
O24 |
180.1 |
180.0 |
C18 |
C21 |
O23 |
H231 |
180.0 |
175.1 |
C15 |
C19 |
C22 |
H191 |
180.0 |
179.7 |
C18 |
S20 |
C22 |
C19 |
359.7 |
0.0 |
S20 |
C22 |
C19 |
H221 |
180.0 |
179.9 |
C15 |
C19 |
H191 |
C22 |
180.0 |
180.3 |
H191 |
C19 |
C22 |
S20 |
180.1 |
180.0 |
H191 |
C19 |
C22 |
H221 |
0.1 |
0.0 |
C22 |
S20 |
C18 |
C21 |
180.3 |
180.0 |
S20 |
C22 |
C19 |
H191 |
180.1 |
180.0 |
C19 |
C22 |
S20 |
H221 |
180.0 |
180.1 |
C18 |
C21 |
O23 |
O24 |
179.9 |
180.0 |
C18 |
C21 |
O24 |
O23 |
180.1 |
180.0 |
O24 |
C21 |
O23 |
H231 |
0.1 |
355.0 |
H221 |
C22 |
C19 |
H191 |
0.1 |
0.0 |
C19 |
C22 |
H221 |
S20 |
180.0 |
179.9 |
H231 |
O23 |
C21 |
O24 |
0.1 |
355.0 |