PDB Chemical Component SRE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SRE
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CL19 |
C16 |
1.791 |
1.736 |
| C16 |
C17 |
1.395 |
1.383 |
| C15 |
C16 |
1.378 |
1.385 |
| C15 |
C14 |
1.393 |
1.383 |
| CL20 |
C15 |
1.785 |
1.736 |
| C17 |
C18 |
1.397 |
1.381 |
| C17 |
H17 |
1.080 |
1.081 |
| C18 |
H18 |
1.080 |
1.080 |
| C13 |
C18 |
1.402 |
1.382 |
| C13 |
C4 |
1.489 |
1.507 |
| C14 |
C13 |
1.392 |
1.382 |
| C14 |
H14 |
1.080 |
1.080 |
| C4 |
C3 |
1.530 |
1.527 |
| C4 |
C5 |
1.497 |
1.506 |
| C4 |
H4 |
1.100 |
1.091 |
| C5 |
C10 |
1.404 |
1.378 |
| C6 |
C5 |
1.399 |
1.388 |
| C6 |
C7 |
1.393 |
1.380 |
| C6 |
H6 |
1.080 |
1.081 |
| C7 |
C8 |
1.390 |
1.381 |
| C7 |
H7 |
1.080 |
1.080 |
| C8 |
C9 |
1.393 |
1.380 |
| C8 |
H8 |
1.080 |
1.080 |
| C9 |
H9 |
1.081 |
1.080 |
| C10 |
C9 |
1.396 |
1.388 |
| C10 |
C1 |
1.492 |
1.506 |
| C1 |
N11 |
1.459 |
1.469 |
| C1 |
H1 |
1.100 |
1.090 |
| N11 |
C12 |
1.456 |
1.469 |
| C12 |
H12 |
1.100 |
1.090 |
| C12 |
H12A |
1.100 |
1.090 |
| C2 |
C1 |
1.529 |
1.528 |
| C2 |
H2 |
1.100 |
1.090 |
| C2 |
H2A |
1.100 |
1.090 |
| C3 |
C2 |
1.523 |
1.534 |
| C3 |
H3 |
1.100 |
1.090 |
| C3 |
H3A |
1.100 |
1.090 |
| N11 |
H16 |
1.000 |
1.009 |
| C12 |
H171 |
1.100 |
1.090 |
Bond Angles for SRE
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CL19 |
C16 |
C17 |
122.1 |
120.0 |
| C15 |
C16 |
C17 |
120.2 |
119.9 |
| C16 |
C17 |
C18 |
119.0 |
120.0 |
| C16 |
C17 |
H17 |
120.5 |
120.0 |
| CL20 |
C15 |
C14 |
121.2 |
120.0 |
| C15 |
C14 |
C13 |
119.3 |
120.0 |
| C15 |
C14 |
H14 |
120.4 |
120.0 |
| C18 |
C17 |
H17 |
120.5 |
120.0 |
| C17 |
C18 |
H18 |
119.7 |
120.0 |
| C13 |
C18 |
H18 |
119.7 |
120.0 |
| C14 |
C13 |
C4 |
118.2 |
120.0 |
| C13 |
C4 |
C3 |
110.3 |
109.3 |
| C13 |
C4 |
C5 |
113.3 |
109.3 |
| C13 |
C4 |
H4 |
107.1 |
109.3 |
| C5 |
C4 |
C3 |
111.9 |
110.6 |
| C3 |
C4 |
H4 |
108.7 |
109.2 |
| C4 |
C3 |
C2 |
109.6 |
108.4 |
| C4 |
C3 |
H3 |
109.4 |
109.7 |
| C4 |
C3 |
H3A |
109.4 |
109.7 |
| C5 |
C4 |
H4 |
105.3 |
109.2 |
| C4 |
C5 |
C10 |
122.1 |
122.6 |
| C6 |
C5 |
C10 |
119.0 |
119.6 |
| C5 |
C10 |
C9 |
119.5 |
119.7 |
| C5 |
C10 |
C1 |
122.8 |
122.5 |
| C7 |
C6 |
H6 |
119.4 |
119.7 |
| C6 |
C7 |
C8 |
119.6 |
119.8 |
| C6 |
C7 |
H7 |
120.2 |
120.1 |
| C8 |
C7 |
H7 |
120.2 |
120.1 |
| C7 |
C8 |
C9 |
119.8 |
119.8 |
| C7 |
C8 |
H8 |
120.1 |
120.1 |
| C9 |
C8 |
H8 |
120.1 |
120.1 |
| C8 |
C9 |
H9 |
119.5 |
119.7 |
| C10 |
C9 |
H9 |
119.5 |
119.7 |
| C10 |
C1 |
N11 |
110.2 |
109.3 |
| C10 |
C1 |
H1 |
108.5 |
109.3 |
| N11 |
C1 |
H1 |
108.4 |
109.3 |
| C1 |
N11 |
C12 |
120.6 |
111.0 |
| C1 |
N11 |
H16 |
105.9 |
111.0 |
| C2 |
C1 |
H1 |
107.6 |
109.2 |
| N11 |
C12 |
H12 |
109.5 |
109.5 |
| N11 |
C12 |
H12A |
109.5 |
109.4 |
| C12 |
N11 |
H16 |
105.9 |
111.0 |
| N11 |
C12 |
H171 |
109.5 |
109.5 |
| H12 |
C12 |
H12A |
109.4 |
109.4 |
| H12 |
C12 |
H171 |
109.5 |
109.5 |
| H12A |
C12 |
H171 |
109.5 |
109.5 |
| H2 |
C2 |
H2A |
110.3 |
109.7 |
| C3 |
C2 |
H2 |
109.1 |
109.7 |
| C3 |
C2 |
H2A |
108.9 |
109.7 |
| H3 |
C3 |
H3A |
109.6 |
109.7 |
Torsion Angles for SRE
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C15 |
C16 |
CL19 |
C17 |
180.1 |
180.4 |
| CL19 |
C16 |
C17 |
C18 |
180.1 |
180.0 |
| CL19 |
C16 |
C17 |
H17 |
0.1 |
0.1 |
| C18 |
C17 |
C16 |
H17 |
180.0 |
179.9 |
| C16 |
C17 |
C18 |
H18 |
180.3 |
180.0 |
| CL19 |
C16 |
C15 |
C17 |
179.9 |
179.6 |
| C15 |
C16 |
C17 |
C18 |
360.0 |
359.6 |
| C15 |
C16 |
C17 |
H17 |
180.0 |
179.7 |
| C14 |
C15 |
C16 |
C17 |
359.9 |
0.3 |
| C15 |
C14 |
C13 |
C4 |
179.7 |
180.0 |
| CL20 |
C15 |
C16 |
C17 |
180.2 |
180.3 |
| CL20 |
C15 |
C14 |
C13 |
179.6 |
180.0 |
| CL20 |
C15 |
C14 |
H14 |
359.6 |
359.9 |
| C16 |
C17 |
C18 |
H17 |
180.0 |
180.1 |
| C13 |
C18 |
C17 |
H18 |
180.0 |
180.1 |
| C16 |
C17 |
H17 |
C18 |
180.0 |
179.9 |
| H17 |
C17 |
C18 |
H18 |
0.3 |
359.9 |
| H18 |
C18 |
C17 |
H17 |
0.3 |
359.9 |
| C15 |
C14 |
C13 |
C18 |
0.4 |
359.7 |
| C13 |
C18 |
C17 |
H17 |
180.3 |
180.0 |
| C17 |
C18 |
C13 |
H18 |
180.0 |
179.9 |
| C4 |
C13 |
C18 |
H18 |
0.2 |
0.0 |
| C5 |
C4 |
C13 |
C3 |
233.7 |
238.9 |
| C3 |
C4 |
C13 |
H4 |
241.9 |
240.6 |
| C13 |
C4 |
C3 |
C2 |
185.4 |
188.6 |
| C13 |
C4 |
C3 |
H3 |
305.3 |
308.3 |
| C13 |
C4 |
C3 |
H3A |
65.4 |
68.8 |
| C5 |
C4 |
C13 |
H4 |
115.7 |
119.5 |
| C13 |
C4 |
C5 |
C10 |
141.7 |
138.2 |
| C15 |
C14 |
C13 |
H14 |
180.0 |
179.9 |
| C14 |
C13 |
C18 |
H18 |
179.6 |
180.3 |
| C14 |
C13 |
C4 |
C3 |
243.5 |
59.7 |
| C14 |
C13 |
C4 |
C5 |
117.2 |
298.6 |
| C14 |
C13 |
C4 |
H4 |
1.5 |
179.1 |
| C15 |
C14 |
H14 |
C13 |
180.0 |
180.1 |
| H14 |
C14 |
C13 |
C4 |
359.7 |
0.1 |
| C13 |
C4 |
C3 |
C5 |
233.0 |
239.7 |
| C13 |
C4 |
C3 |
H4 |
117.1 |
119.5 |
| C5 |
C4 |
C3 |
H4 |
244.2 |
239.8 |
| C3 |
C4 |
C5 |
C10 |
16.4 |
17.9 |
| C4 |
C3 |
C2 |
H2 |
305.8 |
310.1 |
| C4 |
C3 |
C2 |
H2A |
185.4 |
189.6 |
| H3 |
C3 |
C4 |
H3A |
239.9 |
239.5 |
| C13 |
C4 |
C5 |
C3 |
125.4 |
120.3 |
| C13 |
C4 |
C5 |
H4 |
243.2 |
240.5 |
| C3 |
C4 |
C5 |
H4 |
117.9 |
120.2 |
| C5 |
C4 |
C3 |
C2 |
312.4 |
308.8 |
| C5 |
C4 |
C3 |
H3 |
72.4 |
68.6 |
| C5 |
C4 |
C3 |
H3A |
192.4 |
189.1 |
| C6 |
C5 |
C4 |
C10 |
178.9 |
180.0 |
| C4 |
C5 |
C10 |
C9 |
179.3 |
179.5 |
| C4 |
C5 |
C10 |
C1 |
359.1 |
359.1 |
| C13 |
C4 |
H4 |
C3 |
240.9 |
240.5 |
| C13 |
C4 |
H4 |
C5 |
120.9 |
119.5 |
| C5 |
C4 |
H4 |
C3 |
120.0 |
121.1 |
| H4 |
C4 |
C3 |
C2 |
68.2 |
69.1 |
| H4 |
C4 |
C3 |
H3 |
188.2 |
188.8 |
| H4 |
C4 |
C3 |
H3A |
308.3 |
309.3 |
| H4 |
C4 |
C5 |
C10 |
258.5 |
257.7 |
| C10 |
C5 |
C4 |
C3 |
16.4 |
17.9 |
| C10 |
C5 |
C4 |
H4 |
258.5 |
257.7 |
| C5 |
C10 |
C9 |
H9 |
179.8 |
180.3 |
| C5 |
C10 |
C1 |
N11 |
253.7 |
257.6 |
| C5 |
C10 |
C1 |
H1 |
135.1 |
138.1 |
| C6 |
C5 |
C4 |
C3 |
195.2 |
197.9 |
| C6 |
C5 |
C4 |
H4 |
77.4 |
77.7 |
| C4 |
C5 |
C6 |
C10 |
181.1 |
180.0 |
| C6 |
C5 |
C10 |
C9 |
0.4 |
359.6 |
| C6 |
C5 |
C10 |
C1 |
180.2 |
179.2 |
| C7 |
C6 |
C5 |
C10 |
359.9 |
0.3 |
| C8 |
C7 |
C6 |
H7 |
180.0 |
180.0 |
| C6 |
C7 |
C8 |
C9 |
0.6 |
359.8 |
| C6 |
C7 |
C8 |
H8 |
180.6 |
179.9 |
| H6 |
C6 |
C5 |
C10 |
179.9 |
180.2 |
| H6 |
C6 |
C7 |
C8 |
179.6 |
180.1 |
| H6 |
C6 |
C7 |
H7 |
359.6 |
0.1 |
| C8 |
C7 |
C6 |
H6 |
179.6 |
180.1 |
| C6 |
C7 |
C8 |
H7 |
180.0 |
180.0 |
| C9 |
C8 |
C7 |
H8 |
180.0 |
179.9 |
| C7 |
C8 |
C9 |
H9 |
179.7 |
180.0 |
| H7 |
C7 |
C6 |
H6 |
359.6 |
0.1 |
| C6 |
C7 |
H7 |
C8 |
180.0 |
180.0 |
| H7 |
C7 |
C8 |
C9 |
180.5 |
179.9 |
| H7 |
C7 |
C8 |
H8 |
0.6 |
359.9 |
| C5 |
C10 |
C9 |
C8 |
359.8 |
0.3 |
| C9 |
C8 |
C7 |
H7 |
180.5 |
179.9 |
| C7 |
C8 |
C9 |
H8 |
180.0 |
180.1 |
| C10 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
| H8 |
C8 |
C7 |
H7 |
0.6 |
359.9 |
| C7 |
C8 |
H8 |
C9 |
180.0 |
179.9 |
| H8 |
C8 |
C9 |
H9 |
359.7 |
360.0 |
| H9 |
C9 |
C8 |
H8 |
359.7 |
360.0 |
| C5 |
C10 |
C9 |
C1 |
179.8 |
179.6 |
| C10 |
C9 |
C8 |
H8 |
179.7 |
179.9 |
| C8 |
C9 |
C10 |
H9 |
180.0 |
180.0 |
| C5 |
C10 |
C1 |
C9 |
180.2 |
180.4 |
| C1 |
C10 |
C9 |
H9 |
360.0 |
0.6 |
| N11 |
C1 |
C10 |
H1 |
118.6 |
119.5 |
| C10 |
C1 |
N11 |
C12 |
184.4 |
275.0 |
| C10 |
C1 |
N11 |
H16 |
304.4 |
38.9 |
| C2 |
C1 |
C10 |
H1 |
242.0 |
239.8 |
| C10 |
C1 |
N11 |
H1 |
241.4 |
240.5 |
| C2 |
C1 |
N11 |
H1 |
118.0 |
119.4 |
| C1 |
N11 |
C12 |
H12 |
137.3 |
300.1 |
| C1 |
N11 |
C12 |
H12A |
257.2 |
60.0 |
| C12 |
N11 |
C1 |
H16 |
240.0 |
236.0 |
| C1 |
N11 |
C12 |
H171 |
17.2 |
180.0 |
| C10 |
C1 |
H1 |
N11 |
119.7 |
119.5 |
| H1 |
C1 |
N11 |
C12 |
303.0 |
34.5 |
| H1 |
C1 |
N11 |
H16 |
63.0 |
158.4 |
| C12 |
N11 |
C1 |
H1 |
303.0 |
34.5 |
| C1 |
N11 |
C12 |
H16 |
120.0 |
124.0 |
| H12 |
C12 |
N11 |
H12A |
240.0 |
240.1 |
| H12 |
C12 |
N11 |
H171 |
120.0 |
120.1 |
| H12A |
C12 |
N11 |
H171 |
240.0 |
240.0 |
| N11 |
C12 |
H12 |
H12A |
120.0 |
119.9 |
| H12 |
C12 |
N11 |
H16 |
17.3 |
176.1 |
| N11 |
C12 |
H12 |
H171 |
240.0 |
239.9 |
| H12A |
C12 |
H12 |
H171 |
120.0 |
120.0 |
| N11 |
C12 |
H12A |
H12 |
240.0 |
240.0 |
| H12A |
C12 |
N11 |
H16 |
137.2 |
296.0 |
| N11 |
C12 |
H12A |
H171 |
120.0 |
120.0 |
| H12 |
C12 |
H12A |
H171 |
240.0 |
240.0 |
| C4 |
C3 |
C2 |
C1 |
65.8 |
69.9 |
| C10 |
C1 |
C2 |
H1 |
118.5 |
120.3 |
| N11 |
C1 |
C2 |
H1 |
241.5 |
240.5 |
| C2 |
C1 |
N11 |
H16 |
181.0 |
277.8 |
| H2 |
C2 |
C1 |
H1 |
312.6 |
308.4 |
| C3 |
C2 |
H2 |
H2A |
240.4 |
239.5 |
| H2A |
C2 |
C1 |
H1 |
73.0 |
68.9 |
| C3 |
C2 |
H2A |
H2 |
119.7 |
120.5 |
| C2 |
C3 |
C4 |
H4 |
68.2 |
69.1 |
| C4 |
C3 |
C2 |
H3 |
120.0 |
119.7 |
| C4 |
C3 |
C2 |
H3A |
240.0 |
240.2 |
| C3 |
C2 |
C1 |
H1 |
192.6 |
188.7 |
| H2 |
C2 |
C3 |
H2A |
120.4 |
120.5 |
| H3 |
C3 |
C4 |
H4 |
188.2 |
188.8 |
| C4 |
C3 |
H3 |
C2 |
239.9 |
241.1 |
| C4 |
C3 |
H3 |
H3A |
120.0 |
120.6 |
| H3 |
C3 |
C2 |
H2 |
185.8 |
190.4 |
| H3 |
C3 |
C2 |
H2A |
65.4 |
69.9 |
| H3A |
C3 |
C4 |
H4 |
308.3 |
309.3 |
| C4 |
C3 |
H3A |
C2 |
120.0 |
119.0 |
| C4 |
C3 |
H3A |
H3 |
240.0 |
239.5 |
| H3A |
C3 |
C2 |
H2 |
65.8 |
69.9 |
| H3A |
C3 |
C2 |
H2A |
305.3 |
309.4 |
| H16 |
N11 |
C1 |
H1 |
63.0 |
158.4 |
| C1 |
N11 |
H16 |
C12 |
230.8 |
236.0 |
| H16 |
N11 |
C12 |
H12 |
17.3 |
176.1 |
| H16 |
N11 |
C12 |
H12A |
137.2 |
296.0 |
| H16 |
N11 |
C12 |
H171 |
257.3 |
56.0 |
| N11 |
C12 |
H171 |
H12 |
120.0 |
120.1 |
| N11 |
C12 |
H171 |
H12A |
240.0 |
240.0 |
| H171 |
C12 |
N11 |
H16 |
257.3 |
56.0 |
| H12 |
C12 |
H171 |
H12A |
120.0 |
120.0 |