PDB Chemical Component SR2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SR2
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C67 |
N63 |
1.447 |
1.469 |
| N63 |
C65 |
1.447 |
1.469 |
| N63 |
C61 |
1.462 |
1.469 |
| C61 |
C51 |
1.526 |
1.507 |
| C51 |
C11 |
1.529 |
1.330 |
| C11 |
C10 |
1.528 |
1.470 |
| C10 |
N11 |
1.317 |
1.347 |
| C10 |
O61 |
1.215 |
1.217 |
| N11 |
C9 |
1.334 |
1.399 |
| C9 |
C13 |
1.374 |
1.398 |
| C9 |
C8 |
1.399 |
1.380 |
| C13 |
C17 |
1.365 |
1.362 |
| C8 |
C7 |
1.394 |
1.398 |
| C17 |
C18 |
1.375 |
1.401 |
| C7 |
C18 |
1.397 |
1.417 |
| C7 |
C6 |
1.427 |
1.417 |
| C18 |
N2 |
1.327 |
1.342 |
| C6 |
N1 |
1.351 |
1.381 |
| C6 |
N3 |
1.340 |
1.326 |
| N2 |
C19 |
1.306 |
1.311 |
| N1 |
C5 |
1.370 |
1.398 |
| C19 |
N3 |
1.307 |
1.323 |
| C4 |
C5 |
1.403 |
1.389 |
| C4 |
C3 |
1.406 |
1.382 |
| C5 |
C20 |
1.392 |
1.389 |
| BRR1 |
C3 |
1.926 |
1.891 |
| C3 |
C22 |
1.397 |
1.384 |
| C20 |
C21 |
1.393 |
1.381 |
| C22 |
C21 |
1.387 |
1.382 |
| C4 |
H4 |
1.080 |
1.080 |
| C22 |
H22 |
1.080 |
1.080 |
| C21 |
H21 |
1.080 |
1.081 |
| C20 |
H20 |
1.080 |
1.080 |
| N1 |
HN1 |
0.999 |
0.969 |
| C8 |
H8 |
1.081 |
1.079 |
| C19 |
H19 |
1.080 |
1.080 |
| C17 |
H17 |
1.080 |
1.080 |
| C13 |
H13 |
1.080 |
1.081 |
| N11 |
HN11 |
1.000 |
0.971 |
| C11 |
H111 |
1.080 |
1.081 |
| C51 |
H511 |
1.080 |
1.079 |
| C61 |
H611 |
1.100 |
1.089 |
| C61 |
H612 |
1.100 |
1.090 |
| C65 |
H651 |
1.100 |
1.089 |
| C65 |
H652 |
1.100 |
1.089 |
| C65 |
H653 |
1.100 |
1.090 |
| C67 |
H671 |
1.100 |
1.090 |
| C67 |
H672 |
1.099 |
1.090 |
| C67 |
H673 |
1.100 |
1.090 |
Bond Angles for SR2
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N63 |
C65 |
H651 |
109.5 |
109.5 |
| N63 |
C65 |
H652 |
109.4 |
109.5 |
| N63 |
C65 |
H653 |
109.5 |
109.4 |
| N63 |
C61 |
H611 |
108.4 |
109.5 |
| N63 |
C61 |
H612 |
107.7 |
109.5 |
| C61 |
C51 |
H511 |
130.1 |
120.0 |
| C51 |
C11 |
H111 |
117.2 |
120.0 |
| C10 |
N11 |
HN11 |
122.8 |
120.0 |
| C9 |
C13 |
H13 |
119.7 |
119.5 |
| C9 |
C8 |
H8 |
118.8 |
120.4 |
| C13 |
C17 |
H17 |
119.7 |
120.1 |
| C8 |
C7 |
C18 |
116.4 |
119.8 |
| C7 |
C18 |
N2 |
120.1 |
118.6 |
| C7 |
C6 |
N3 |
117.0 |
118.2 |
| C6 |
N1 |
HN1 |
116.2 |
120.0 |
| N2 |
C19 |
H19 |
118.8 |
118.5 |
| C3 |
C4 |
C5 |
122.9 |
119.9 |
| C4 |
C5 |
C20 |
116.4 |
119.8 |
| C5 |
C4 |
H4 |
118.5 |
120.1 |
| C4 |
C3 |
C22 |
116.8 |
120.0 |
| C3 |
C4 |
H4 |
118.6 |
120.0 |
| C5 |
C20 |
H20 |
118.1 |
120.0 |
| BRR1 |
C3 |
C22 |
119.3 |
120.0 |
| C3 |
C22 |
C21 |
123.1 |
120.2 |
| C3 |
C22 |
H22 |
118.4 |
119.9 |
| C20 |
C21 |
H21 |
121.5 |
119.9 |
| C21 |
C22 |
H22 |
118.4 |
119.9 |
| C22 |
C21 |
H21 |
121.5 |
120.0 |
| H611 |
C61 |
H612 |
112.0 |
109.5 |
| H651 |
C65 |
H652 |
109.5 |
109.5 |
| H651 |
C65 |
H653 |
109.5 |
109.4 |
| H652 |
C65 |
H653 |
109.5 |
109.5 |
| H671 |
C67 |
H672 |
109.5 |
109.4 |
| H671 |
C67 |
H673 |
109.5 |
109.5 |
| H672 |
C67 |
H673 |
109.5 |
109.5 |
Torsion Angles for SR2
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C67 |
N63 |
C65 |
H651 |
82.7 |
296.0 |
| C67 |
N63 |
C65 |
H652 |
202.6 |
56.1 |
| C67 |
N63 |
C65 |
H653 |
322.7 |
176.1 |
| C67 |
N63 |
C61 |
H611 |
294.9 |
70.0 |
| C67 |
N63 |
C61 |
H612 |
56.3 |
309.9 |
| C65 |
N63 |
C61 |
H611 |
168.8 |
306.1 |
| C65 |
N63 |
C61 |
H612 |
290.2 |
186.0 |
| H651 |
C65 |
N63 |
H652 |
240.0 |
239.9 |
| H651 |
C65 |
N63 |
H653 |
120.0 |
119.9 |
| H652 |
C65 |
N63 |
H653 |
240.0 |
240.0 |
| N63 |
C61 |
C51 |
H511 |
71.7 |
305.0 |
| H611 |
C61 |
N63 |
H612 |
238.6 |
120.1 |
| C61 |
C51 |
C11 |
H111 |
19.3 |
0.0 |
| C11 |
C10 |
N11 |
HN11 |
7.2 |
355.3 |
| O61 |
C10 |
N11 |
HN11 |
196.8 |
175.3 |
| N11 |
C9 |
C13 |
H13 |
2.8 |
360.0 |
| N11 |
C9 |
C8 |
H8 |
356.7 |
0.0 |
| C13 |
C9 |
C8 |
H8 |
183.3 |
180.0 |
| C9 |
C13 |
C17 |
H17 |
182.1 |
179.9 |
| C8 |
C7 |
C18 |
N2 |
181.1 |
180.0 |
| C8 |
C7 |
C6 |
N3 |
179.0 |
180.2 |
| C18 |
C7 |
C6 |
N3 |
359.6 |
0.2 |
| C7 |
C6 |
N1 |
HN1 |
14.5 |
5.3 |
| C18 |
N2 |
C19 |
H19 |
179.5 |
180.2 |
| N3 |
C6 |
N1 |
HN1 |
195.5 |
185.1 |
| C7 |
C18 |
N2 |
C19 |
359.8 |
359.8 |
| N1 |
C5 |
C4 |
H4 |
1.4 |
0.2 |
| N1 |
C5 |
C20 |
H20 |
359.4 |
0.1 |
| C5 |
C4 |
C3 |
C22 |
359.8 |
359.9 |
| C3 |
C4 |
C5 |
H4 |
180.0 |
179.8 |
| C4 |
C5 |
C20 |
H20 |
180.9 |
180.0 |
| C3 |
C4 |
C5 |
C20 |
359.8 |
0.1 |
| C5 |
C4 |
C3 |
H4 |
180.0 |
180.2 |
| BRR1 |
C3 |
C4 |
C22 |
180.8 |
180.1 |
| C4 |
C3 |
C22 |
C21 |
359.9 |
0.1 |
| C4 |
C3 |
C22 |
H22 |
179.9 |
180.0 |
| C20 |
C5 |
C4 |
H4 |
179.8 |
180.3 |
| C5 |
C20 |
C21 |
H21 |
178.8 |
180.0 |
| BRR1 |
C3 |
C4 |
C5 |
180.6 |
180.0 |
| C4 |
C3 |
BRR1 |
C22 |
179.1 |
179.9 |
| BRR1 |
C3 |
C4 |
H4 |
0.6 |
359.8 |
| BRR1 |
C3 |
C22 |
C21 |
179.1 |
180.0 |
| BRR1 |
C3 |
C22 |
H22 |
359.1 |
359.8 |
| C22 |
C3 |
C4 |
C5 |
359.8 |
359.9 |
| C22 |
C3 |
C4 |
H4 |
179.8 |
179.7 |
| C21 |
C22 |
C3 |
H22 |
180.0 |
180.2 |
| C3 |
C22 |
C21 |
H21 |
180.8 |
179.9 |
| C4 |
C5 |
C20 |
C21 |
0.9 |
359.9 |
| C20 |
C21 |
C22 |
H22 |
180.8 |
180.1 |
| C22 |
C21 |
C20 |
H21 |
180.0 |
180.0 |
| C3 |
C22 |
C21 |
H22 |
180.0 |
179.8 |
| C20 |
C21 |
C22 |
H21 |
180.0 |
180.0 |
| C3 |
C4 |
H4 |
C5 |
180.0 |
180.2 |
| H4 |
C4 |
C5 |
C20 |
179.8 |
180.3 |
| H4 |
C4 |
C3 |
C22 |
179.8 |
179.7 |
| C3 |
C22 |
H22 |
C21 |
180.0 |
180.2 |
| H22 |
C22 |
C21 |
H21 |
0.8 |
0.1 |
| H21 |
C21 |
C22 |
H22 |
0.8 |
0.1 |
| H20 |
C20 |
C21 |
H21 |
358.8 |
360.0 |
| H8 |
C8 |
C7 |
C18 |
178.0 |
180.0 |
| H13 |
C13 |
C17 |
H17 |
2.2 |
359.9 |
| H511 |
C51 |
C11 |
H111 |
199.2 |
180.0 |
| N63 |
C61 |
H611 |
H612 |
118.7 |
239.9 |
| H611 |
C61 |
C51 |
H511 |
311.7 |
65.0 |
| N63 |
C61 |
H612 |
H611 |
240.9 |
120.1 |
| H612 |
C61 |
C51 |
H511 |
190.3 |
185.0 |
| N63 |
C65 |
H651 |
H652 |
120.0 |
120.0 |
| N63 |
C65 |
H651 |
H653 |
240.0 |
240.0 |
| H652 |
C65 |
H651 |
H653 |
120.0 |
120.0 |
| N63 |
C65 |
H652 |
H651 |
240.0 |
239.9 |
| N63 |
C65 |
H652 |
H653 |
120.0 |
120.0 |
| H651 |
C65 |
H652 |
H653 |
240.0 |
240.0 |
| N63 |
C65 |
H653 |
H651 |
120.0 |
120.0 |
| N63 |
C65 |
H653 |
H652 |
240.0 |
240.0 |
| H651 |
C65 |
H653 |
H652 |
120.0 |
120.0 |
| H672 |
C67 |
H671 |
H673 |
120.0 |
120.0 |
| H671 |
C67 |
H672 |
H673 |
240.0 |
240.0 |
| H671 |
C67 |
H673 |
H672 |
120.0 |
120.0 |