PDB Chemical Component SQ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SQ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1	C2	1.215	1.208
O2	C3	1.222	1.207
N1	C1	1.296	1.467
N1	C6	1.457	1.468
N1	H1	1.019	1.008
N2	C4	1.344	1.468
N2	C5	1.400	1.469
N2	H3	1.020	1.008
C1	C2	1.496	1.516
C1	C4	1.395	1.538
C1	H2	1.115	1.090
C2	C3	1.480	1.499
C3	C4	1.440	1.515
C4	H4	1.115	1.091
C5	H10	1.115	1.090
C5	H11	1.115	1.089
C5	H12	1.116	1.089
C6	C7	1.519	1.530
C6	H5	1.116	1.091
C6	H6	1.114	1.089
C7	H7	1.115	1.089
C7	H8	1.115	1.090
C7	H9	1.116	1.090

Bond Angles for SQ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C2	C1	130.8	136.1
O1	C2	C3	142.4	136.0
O2	C3	C2	138.1	135.9
O2	C3	C4	132.0	136.0
C1	N1	C6	123.4	106.8
C1	N1	H1	107.2	106.8
N1	C1	C2	131.9	113.7
N1	C1	C4	137.2	113.8
N1	C1	H2	9.3	113.0
C6	N1	H1	107.3	106.7
N1	C6	C7	112.1	109.6
N1	C6	H5	111.2	109.5
N1	C6	H6	111.2	109.5
C4	N2	C5	135.2	106.7
C4	N2	H3	103.4	106.7
N2	C4	C1	135.8	113.7
N2	C4	C3	131.9	113.8
N2	C4	H4	7.0	112.9
C5	N2	H3	103.4	106.7
N2	C5	H10	135.3	109.5
N2	C5	H11	103.4	109.5
N2	C5	H12	103.4	109.5
C2	C1	C4	90.9	86.6
C2	C1	H2	141.1	113.6
C1	C2	C3	86.8	87.9
C4	C1	H2	127.9	113.7
C1	C4	C3	92.4	86.6
C1	C4	H4	128.8	113.7
C2	C3	C4	89.8	88.0
C3	C4	H4	138.8	113.7
H10	C5	H11	103.4	109.4
H10	C5	H12	103.4	109.5
H11	C5	H12	105.1	109.5
C7	C6	H5	111.2	109.4
C7	C6	H6	111.2	109.5
C6	C7	H7	112.2	109.5
C6	C7	H8	111.2	109.5
C6	C7	H9	111.2	109.4
H5	C6	H6	99.1	109.4
H7	C7	H8	111.3	109.5
H7	C7	H9	111.2	109.5
H8	C7	H9	99.1	109.5

Torsion Angles for SQ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2	C3	C2	O1	357.7	24.9
N1	C1	C2	O1	359.8	270.0
O1	C2	C1	C4	179.9	155.5
O1	C2	C1	H2	0.1	41.1
C1	C2	O1	C3	179.5	180.0
O1	C2	C3	C4	180.0	204.9
O1	C2	C3	O2	357.7	24.9
N2	C4	C3	O2	2.0	41.0
C1	C2	C3	O2	178.1	204.9
C1	C4	C3	O2	181.7	155.4
C2	C3	O2	C4	183.2	179.9
O2	C3	C4	H4	0.6	269.9
O1	C2	C1	N1	359.8	270.0
C6	N1	C1	H1	125.2	113.8
C1	N1	C6	C7	284.9	179.9
C1	N1	C6	H5	50.2	59.9
C1	N1	C6	H6	159.7	300.0
N2	C4	C1	N1	0.1	24.4
C2	C1	N1	C4	180.1	263.0
C2	C1	N1	H2	179.0	131.4
N1	C1	C2	C3	179.5	90.0
C4	C1	N1	H2	358.9	228.5
N1	C1	C4	C3	180.5	269.8
N1	C1	C4	H4	1.4	155.4
C1	N1	C6	H1	234.8	246.1
C6	N1	C1	C2	0.2	111.1
C6	N1	C1	C4	180.1	208.2
C6	N1	C1	H2	181.2	339.7
C7	C6	N1	H5	234.8	120.0
C7	C6	N1	H6	125.3	239.9
N1	C6	C7	H7	180.0	180.0
N1	C6	C7	H8	305.3	300.0
N1	C6	C7	H9	54.8	60.0
H5	C6	N1	H6	250.5	119.9
C1	N1	H1	C6	134.4	113.9
H1	N1	C1	C2	235.0	357.3
H1	N1	C1	C4	54.9	94.3
H1	N1	C1	H2	56.0	225.8
H1	N1	C6	C7	50.1	293.9
H1	N1	C6	H5	175.4	173.9
H1	N1	C6	H6	284.9	54.0
O2	C3	C4	N2	2.0	41.0
N1	C1	C4	N2	0.1	24.4
C5	N2	C4	H3	125.3	246.2
C4	N2	C5	H10	180.0	180.0
C4	N2	C5	H11	305.3	300.0
C4	N2	C5	H12	54.7	60.0
C2	C1	C4	N2	180.0	138.8
N2	C4	C1	H2	359.9	253.2
C1	C4	N2	C3	180.5	263.0
C1	C4	N2	H4	8.6	131.5
C2	C3	C4	N2	179.9	221.0
C3	C4	N2	H4	188.1	228.5
C4	N2	C5	H3	234.7	113.8
C5	N2	C4	C1	143.9	150.0
C5	N2	C4	C3	323.4	247.0
C5	N2	C4	H4	135.3	18.5
H10	C5	N2	H11	234.7	240.0
H10	C5	N2	H12	125.3	120.0
H11	C5	N2	H12	250.6	240.0
C4	N2	H3	C5	143.8	246.2
H3	N2	C4	C1	18.6	263.8
H3	N2	C4	C3	198.1	0.8
H3	N2	C4	H4	10.0	132.3
H3	N2	C5	H10	305.2	66.2
H3	N2	C5	H11	70.6	186.2
H3	N2	C5	H12	180.0	306.2
O1	C2	C1	C3	180.3	180.0
O2	C3	C2	C1	178.1	204.9
C2	C1	N1	C6	0.2	111.1
C2	C1	N1	H1	235.0	357.3
N1	C1	C2	C4	179.9	114.5
N1	C1	C2	H2	359.7	228.9
N2	C4	C1	C2	180.0	138.8
C4	C1	C2	H2	179.8	114.4
C2	C1	C4	C3	0.4	24.3
C2	C1	C4	H4	181.4	269.9
C1	C2	C3	C4	0.4	24.9
O2	C3	C4	C1	181.7	155.4
C4	C1	N1	C6	180.1	208.2
C4	C1	N1	H1	54.9	94.3
N1	C1	C4	C2	180.1	245.5
N1	C1	C4	H2	0.2	131.2
C1	C4	N2	C5	143.9	150.0
C1	C4	N2	H3	18.6	263.8
N2	C4	C1	C3	179.6	114.6
N2	C4	C1	H4	358.7	228.9
C2	C1	C4	H2	180.2	245.6
C4	C1	C2	C3	359.6	335.5
C2	C3	C4	C1	359.6	335.4
C3	C4	C1	H4	179.1	114.4
H2	C1	N1	C6	181.2	339.7
H2	C1	N1	H1	56.0	225.8
N1	C1	H2	C2	1.2	131.5
N1	C1	H2	C4	181.0	228.4
C2	C1	H2	C4	179.7	97.0
H2	C1	C2	C3	179.8	221.1
H2	C1	C4	C3	180.3	138.7
H2	C1	C4	H4	1.2	24.3
O1	C2	C3	C1	179.6	180.0
O2	C3	C2	C4	177.7	180.0
N2	C4	C3	C2	179.9	221.0
C3	C2	C1	C4	359.6	335.5
C3	C2	C1	H2	179.8	221.1
C1	C4	C3	C2	359.6	335.4
C2	C3	C4	H4	178.4	89.9
O2	C3	C4	C2	182.1	180.0
C3	C4	N2	C5	323.4	247.0
C3	C4	N2	H3	198.1	0.8
N2	C4	C3	C1	180.4	245.6
N2	C4	C3	H4	1.5	131.1
C3	C4	C1	H2	180.3	138.7
C1	C4	C3	H4	181.1	245.5
H4	C4	N2	C5	135.3	18.5
H4	C4	N2	H3	10.0	132.3
N2	C4	H4	C1	172.3	131.5
N2	C4	H4	C3	350.9	228.4
H4	C4	C1	H2	1.2	24.3
C1	C4	H4	C3	178.6	97.0
H10	C5	N2	H3	305.2	66.2
N2	C5	H10	H11	125.3	120.0
N2	C5	H10	H12	234.7	240.0
H11	C5	H10	H12	109.4	120.0
H11	C5	N2	H3	70.6	186.2
N2	C5	H11	H10	216.2	240.0
N2	C5	H11	H12	108.1	120.0
H10	C5	H11	H12	251.9	240.0
H12	C5	N2	H3	180.0	306.2
N2	C5	H12	H10	143.8	120.0
N2	C5	H12	H11	251.9	240.0
H10	C5	H12	H11	108.1	120.0
C7	C6	N1	H1	50.1	293.9
N1	C6	C7	H5	125.2	240.0
N1	C6	C7	H6	234.7	120.1
H5	C6	C7	H6	109.5	240.1
H7	C7	C6	H8	234.6	240.0
H7	C7	C6	H9	125.2	120.0
H8	C7	C6	H9	250.6	240.0
H5	C6	N1	H1	175.4	173.9
N1	C6	H5	C7	234.2	120.1
N1	C6	H5	H6	117.1	240.0
C7	C6	H5	H6	242.9	120.0
H5	C6	C7	H7	54.7	300.0
H5	C6	C7	H8	180.1	60.0
H5	C6	C7	H9	289.5	180.0
H6	C6	N1	H1	284.9	54.0
N1	C6	H6	C7	125.8	239.9
N1	C6	H6	H5	242.9	119.9
C7	C6	H6	H5	117.1	240.1
H6	C6	C7	H7	305.2	59.9
H6	C6	C7	H8	70.6	179.9
H6	C6	C7	H9	180.0	299.9
H7	C7	C6	H5	54.7	300.0
H7	C7	C6	H6	305.2	59.9
C6	C7	H7	H8	125.3	120.0
C6	C7	H7	H9	234.8	240.1
H8	C7	H7	H9	109.4	120.0
H8	C7	C6	H5	180.1	60.0
H8	C7	C6	H6	70.6	179.9
C6	C7	H8	H7	234.2	240.0
C6	C7	H8	H9	117.1	119.9
H7	C7	H8	H9	242.9	240.0
H9	C7	C6	H5	289.5	180.0
H9	C7	C6	H6	180.0	299.9
C6	C7	H9	H7	125.7	120.0
C6	C7	H9	H8	242.9	240.0
H7	C7	H9	H8	117.1	120.0