PDB Chemical Component SPV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SPV

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.287	1.212
C1	O2'	1.215	1.345
C1	C2	1.524	1.491
O2'	H2'O	0.950	0.967
C2	C3	1.367	1.506
C2	O2	1.278	1.209
C3	S	1.824	1.814
C3	H31	1.115	1.090
C3	H32	1.115	1.090
S	O1S	1.405	1.421
S	O2S	1.424	1.522
S	O3S	1.398	1.421
O2S	H2SO	0.950	0.967

Bond Angles for SPV

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	O2'	122.9	120.0
O1	C1	C2	113.6	119.9
O2'	C1	C2	123.4	120.1
C1	O2'	H2'O	122.9	120.1
C1	C2	C3	130.6	120.1
C1	C2	O2	113.7	120.0
C3	C2	O2	115.7	120.0
C2	C3	S	113.2	109.5
C2	C3	H31	110.8	109.5
C2	C3	H32	110.8	109.5
S	C3	H31	110.8	109.4
S	C3	H32	110.9	109.4
C3	S	O1S	105.7	111.6
C3	S	O2S	104.6	103.2
C3	S	O3S	107.6	111.6
H31	C3	H32	99.5	109.5
O1S	S	O2S	114.2	102.8
O1S	S	O3S	108.5	122.1
O2S	S	O3S	115.5	102.8
S	O2S	H2SO	104.6	106.8

Torsion Angles for SPV

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2'	C1	O1	C2	180.4	180.0
O1	C1	O2'	H2'O	180.0	-0.0
O1	C1	C2	C3	60.5	360.0
O1	C1	C2	O2	241.4	180.0
O1	C1	O2'	C2	179.6	180.0
O2'	C1	C2	C3	240.1	180.0
O2'	C1	C2	O2	61.1	-0.0
O1	C1	C2	O2'	180.4	180.0
C2	C1	O2'	H2'O	0.4	180.0
C3	C2	C1	O2	179.1	180.0
C1	C2	C3	S	67.7	180.0
C1	C2	C3	H31	193.0	300.0
C1	C2	C3	H32	302.4	60.0
H2'O	O2'	C1	C2	0.4	180.0
C1	C2	C3	O2	180.9	180.0
S	C3	C2	H31	234.7	240.0
S	C3	C2	H32	125.3	120.0
C2	C3	S	O1S	46.7	289.7
C2	C3	S	O2S	285.8	180.0
C2	C3	S	O3S	162.5	70.3
H31	C3	C2	H32	250.6	239.9
C1	C2	O2	C3	179.2	180.0
O2	C2	C3	S	246.8	-0.0
O2	C2	C3	H31	12.1	120.0
O2	C2	C3	H32	121.5	240.0
S	C3	C2	O2	246.8	-0.0
C2	C3	S	H31	125.3	120.0
C2	C3	S	H32	234.7	240.0
H31	C3	S	H32	109.5	120.0
O1S	S	C3	O2S	120.9	109.7
O1S	S	C3	O3S	244.2	219.5
O2S	S	C3	O3S	123.4	109.7
C3	S	O2S	H2SO	180.0	180.0
H31	C3	C2	O2	12.1	120.0
C2	C3	H31	S	233.4	240.0
C2	C3	H31	H32	116.6	120.1
S	C3	H31	H32	243.2	240.0
H31	C3	S	O1S	281.4	169.8
H31	C3	S	O2S	160.5	60.0
H31	C3	S	O3S	37.2	310.3
H32	C3	C2	O2	121.5	240.0
C2	C3	H32	S	126.6	120.0
C2	C3	H32	H31	243.3	239.9
S	C3	H32	H31	116.7	120.0
H32	C3	S	O1S	171.9	49.7
H32	C3	S	O2S	51.1	300.0
H32	C3	S	O3S	287.7	190.2
O1S	S	C3	H31	281.4	169.8
O1S	S	C3	H32	171.9	49.7
C3	S	O1S	O2S	245.6	250.0
C3	S	O1S	O3S	115.1	135.8
O2S	S	O1S	O3S	229.6	245.7
O1S	S	O2S	H2SO	64.9	63.8
O2S	S	C3	H31	160.5	60.0
O2S	S	C3	H32	51.1	300.0
C3	S	O2S	O1S	115.1	116.2
C3	S	O2S	O3S	242.0	243.8
O1S	S	O2S	O3S	126.9	127.6
O3S	S	C3	H31	37.2	310.3
O3S	S	C3	H32	287.7	190.2
C3	S	O3S	O1S	246.1	224.2
C3	S	O3S	O2S	116.4	110.0
O1S	S	O3S	O2S	230.3	245.7
O3S	S	O2S	H2SO	298.0	296.2
H2SO	O2S	S	O3S	298.0	296.2