PDB Chemical Component SNC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SNC
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.466 |
1.469 |
| N |
H |
1.020 |
1.010 |
| N |
H2 |
1.021 |
1.008 |
| CA |
CB |
1.566 |
1.528 |
| CA |
C |
1.514 |
1.506 |
| CA |
HA |
1.115 |
1.090 |
| CB |
SG |
1.839 |
1.809 |
| CB |
HB2 |
1.115 |
1.090 |
| CB |
HB3 |
1.116 |
1.090 |
| SG |
ND |
1.757 |
1.560 |
| ND |
OE |
1.202 |
1.217 |
| C |
O |
1.246 |
1.207 |
| C |
OXT |
1.313 |
1.342 |
| OXT |
HXT |
0.950 |
0.968 |
Bond Angles for SNC
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
110.5 |
106.7 |
| CA |
N |
H2 |
111.8 |
106.8 |
| N |
CA |
CB |
110.5 |
109.4 |
| N |
CA |
C |
113.8 |
109.4 |
| N |
CA |
HA |
106.1 |
109.5 |
| H |
N |
H2 |
111.9 |
106.7 |
| CB |
CA |
C |
110.4 |
109.6 |
| CB |
CA |
HA |
109.7 |
109.5 |
| CA |
CB |
SG |
107.6 |
109.5 |
| CA |
CB |
HB2 |
112.9 |
109.5 |
| CA |
CB |
HB3 |
112.9 |
109.5 |
| C |
CA |
HA |
106.2 |
109.5 |
| CA |
C |
O |
120.2 |
120.0 |
| CA |
C |
OXT |
116.6 |
120.0 |
| SG |
CB |
HB2 |
112.9 |
109.5 |
| SG |
CB |
HB3 |
112.9 |
109.5 |
| CB |
SG |
ND |
102.7 |
100.1 |
| HB2 |
CB |
HB3 |
97.5 |
109.4 |
| SG |
ND |
OE |
114.1 |
120.1 |
| O |
C |
OXT |
123.2 |
120.0 |
| C |
OXT |
HXT |
116.6 |
120.0 |
Torsion Angles for SNC
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
125.3 |
113.9 |
| CB |
CA |
N |
C |
235.2 |
239.9 |
| CB |
CA |
N |
HA |
118.8 |
120.0 |
| N |
CA |
CB |
SG |
305.3 |
300.0 |
| N |
CA |
CB |
HB2 |
70.5 |
60.0 |
| N |
CA |
CB |
HB3 |
180.0 |
180.0 |
| C |
CA |
N |
HA |
243.6 |
240.0 |
| N |
CA |
C |
O |
120.4 |
329.9 |
| N |
CA |
C |
OXT |
299.2 |
150.1 |
| CA |
N |
H |
H2 |
234.7 |
246.1 |
| H |
N |
CA |
CB |
180.0 |
53.8 |
| H |
N |
CA |
C |
304.8 |
173.9 |
| H |
N |
CA |
HA |
61.2 |
293.8 |
| CA |
N |
H2 |
H |
124.5 |
113.9 |
| H2 |
N |
CA |
CB |
54.7 |
299.9 |
| H2 |
N |
CA |
C |
179.5 |
60.0 |
| H2 |
N |
CA |
HA |
295.9 |
180.0 |
| CB |
CA |
N |
H |
180.0 |
53.8 |
| CB |
CA |
N |
H2 |
54.7 |
299.9 |
| N |
CA |
CB |
C |
126.7 |
120.0 |
| N |
CA |
CB |
HA |
243.4 |
240.0 |
| C |
CA |
CB |
HA |
116.7 |
120.1 |
| CB |
CA |
C |
O |
245.3 |
89.9 |
| CB |
CA |
C |
OXT |
64.0 |
270.1 |
| SG |
CB |
CA |
HB2 |
234.7 |
240.0 |
| SG |
CB |
CA |
HB3 |
125.3 |
120.0 |
| CA |
CB |
SG |
ND |
260.2 |
180.0 |
| HB2 |
CB |
CA |
HB3 |
250.5 |
240.0 |
| C |
CA |
N |
H |
304.8 |
173.9 |
| C |
CA |
N |
H2 |
179.5 |
60.0 |
| N |
CA |
C |
CB |
235.2 |
240.0 |
| N |
CA |
C |
HA |
116.3 |
120.0 |
| CB |
CA |
C |
HA |
241.1 |
239.9 |
| C |
CA |
CB |
SG |
178.6 |
180.0 |
| C |
CA |
CB |
HB2 |
303.9 |
300.1 |
| C |
CA |
CB |
HB3 |
53.3 |
60.0 |
| O |
C |
CA |
OXT |
181.2 |
179.8 |
| CA |
C |
OXT |
HXT |
180.1 |
179.9 |
| HA |
CA |
N |
H |
61.2 |
293.8 |
| HA |
CA |
N |
H2 |
295.9 |
180.0 |
| N |
CA |
HA |
CB |
119.3 |
119.9 |
| N |
CA |
HA |
C |
238.6 |
240.1 |
| CB |
CA |
HA |
C |
119.3 |
120.1 |
| HA |
CA |
CB |
SG |
61.9 |
60.0 |
| HA |
CA |
CB |
HB2 |
187.1 |
180.0 |
| HA |
CA |
CB |
HB3 |
296.6 |
300.0 |
| HA |
CA |
C |
O |
4.1 |
209.9 |
| HA |
CA |
C |
OXT |
182.9 |
30.1 |
| SG |
CB |
CA |
C |
178.6 |
180.0 |
| SG |
CB |
CA |
HA |
61.9 |
60.0 |
| CA |
CB |
SG |
HB2 |
125.3 |
120.0 |
| CA |
CB |
SG |
HB3 |
234.7 |
240.0 |
| HB2 |
CB |
SG |
HB3 |
109.4 |
119.9 |
| CB |
SG |
ND |
OE |
87.5 |
180.0 |
| HB2 |
CB |
CA |
C |
303.9 |
300.1 |
| HB2 |
CB |
CA |
HA |
187.1 |
180.0 |
| CA |
CB |
HB2 |
SG |
237.6 |
239.9 |
| CA |
CB |
HB2 |
HB3 |
118.9 |
120.0 |
| SG |
CB |
HB2 |
HB3 |
241.2 |
240.1 |
| HB2 |
CB |
SG |
ND |
134.9 |
60.0 |
| HB3 |
CB |
CA |
C |
53.3 |
60.0 |
| HB3 |
CB |
CA |
HA |
296.6 |
300.0 |
| CA |
CB |
HB3 |
SG |
122.4 |
120.1 |
| CA |
CB |
HB3 |
HB2 |
241.1 |
240.0 |
| SG |
CB |
HB3 |
HB2 |
118.8 |
119.9 |
| HB3 |
CB |
SG |
ND |
25.4 |
300.0 |
| ND |
SG |
CB |
HB2 |
134.9 |
60.0 |
| ND |
SG |
CB |
HB3 |
25.4 |
300.0 |
| O |
C |
CA |
HA |
4.1 |
209.9 |
| CA |
C |
O |
OXT |
178.7 |
180.2 |
| O |
C |
OXT |
HXT |
358.8 |
0.1 |
| OXT |
C |
CA |
HA |
182.9 |
30.1 |
| CA |
C |
OXT |
O |
181.3 |
179.8 |