PDB Chemical Component SMS

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SMS

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
S2	N1	1.571	1.655
S2	O10	1.399	1.421
S2	O9	1.394	1.421
S2	O8	1.572	1.521
N1	HN11	1.021	0.969
N1	HN12	1.020	0.970
O8	C1	1.451	1.428
C1	C2	1.538	1.529
C1	HC11	1.114	1.090
C1	HC12	1.114	1.090
C2	C3	1.565	1.535
C2	O3	1.429	1.403
C2	O1	1.407	1.434
C3	C4	1.539	1.533
C3	O2	1.416	1.454
C3	HC3	1.115	1.089
C4	C5	1.580	1.539
C4	O4	1.423	1.454
C4	HC4	1.116	1.090
C5	C6	1.509	1.520
C5	O5	1.431	1.459
C5	HC5	1.116	1.089
C6	O3	1.461	1.423
C6	HC61	1.114	1.091
C6	HC62	1.115	1.089
O5	S1	1.521	1.534
S1	O7	1.383	1.421
S1	O6	1.415	1.421
S1	O4	1.571	1.536
O2	C7	1.424	1.435
C7	C9	1.525	1.530
C7	C8	1.508	1.530
C7	O1	1.465	1.441
C9	HC91	1.114	1.089
C9	HC92	1.116	1.090
C9	HC93	1.114	1.089
C8	HC81	1.114	1.090
C8	HC82	1.114	1.090
C8	HC83	1.116	1.090

Bond Angles for SMS

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N1	S2	O10	111.3	105.8
N1	S2	O9	105.3	105.8
N1	S2	O8	101.2	107.5
S2	N1	HN11	111.3	120.0
S2	N1	HN12	111.5	120.0
O10	S2	O9	117.2	125.3
O10	S2	O8	108.6	105.8
O9	S2	O8	112.0	105.7
S2	O8	C1	119.6	106.9
HN11	N1	HN12	111.5	120.0
O8	C1	C2	105.6	109.6
O8	C1	HC11	113.7	109.4
O8	C1	HC12	113.7	109.5
C2	C1	HC11	113.7	109.5
C2	C1	HC12	113.6	109.4
C1	C2	C3	118.9	109.6
C1	C2	O3	102.1	109.0
C1	C2	O1	108.9	108.3
HC11	C1	HC12	96.9	109.4
C3	C2	O3	113.0	114.2
C3	C2	O1	102.5	102.5
C2	C3	C4	112.2	112.1
C2	C3	O2	104.2	101.6
C2	C3	HC3	110.3	112.2
O3	C2	O1	111.5	113.0
C2	O3	C6	114.4	109.8
C2	O1	C7	111.7	104.0
C4	C3	O2	106.4	106.1
C4	C3	HC3	108.1	112.0
C3	C4	C5	114.4	111.0
C3	C4	O4	110.1	106.9
C3	C4	HC4	104.1	111.6
O2	C3	HC3	115.7	112.3
C3	O2	C7	107.8	106.8
C5	C4	O4	104.3	103.5
C5	C4	HC4	109.9	111.6
C4	C5	C6	112.5	111.4
C4	C5	O5	105.3	104.3
C4	C5	HC5	109.5	109.9
O4	C4	HC4	114.3	111.7
C4	O4	S1	111.7	103.5
C6	C5	O5	107.2	111.6
C6	C5	HC5	107.7	109.8
C5	C6	O3	109.9	109.7
C5	C6	HC61	112.0	109.4
C5	C6	HC62	112.0	109.5
O5	C5	HC5	114.7	109.7
C5	O5	S1	114.1	106.0
O3	C6	HC61	112.1	109.5
O3	C6	HC62	112.1	109.4
HC61	C6	HC62	98.4	109.4
O5	S1	O7	108.2	106.0
O5	S1	O6	109.7	106.0
O5	S1	O4	99.1	105.6
O7	S1	O6	115.8	125.8
O7	S1	O4	112.1	106.0
O6	S1	O4	110.6	105.9
O2	C7	C9	112.5	109.6
O2	C7	C8	107.8	109.6
O2	C7	O1	103.0	108.6
C9	C7	C8	111.4	109.6
C9	C7	O1	111.9	109.7
C7	C9	HC91	112.5	109.5
C7	C9	HC92	111.1	109.5
C7	C9	HC93	111.1	109.4
C8	C7	O1	109.8	109.7
C7	C8	HC81	107.9	109.4
C7	C8	HC82	112.8	109.5
C7	C8	HC83	112.8	109.4
HC91	C9	HC92	111.0	109.4
HC91	C9	HC93	111.1	109.5
HC92	C9	HC93	99.2	109.5
HC81	C8	HC82	112.9	109.5
HC81	C8	HC83	112.8	109.5
HC82	C8	HC83	97.6	109.5

Torsion Angles for SMS

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O10	S2	N1	O9	232.0	134.8
O10	S2	N1	O8	115.2	247.4
O9	S2	N1	O8	243.2	112.6
N1	S2	O8	C1	177.8	89.9
HN11	N1	S2	HN12	125.2	180.1
N1	S2	O10	O9	121.3	236.9
N1	S2	O10	O8	249.4	113.8
O10	S2	N1	HN11	180.0	67.4
O10	S2	N1	HN12	54.8	247.3
O9	S2	O10	O8	128.1	236.9
O10	S2	O8	C1	60.6	202.6
N1	S2	O9	O10	235.6	123.1
N1	S2	O9	O8	109.2	246.2
O9	S2	N1	HN11	307.9	292.7
O9	S2	N1	HN12	182.7	112.6
O10	S2	O9	O8	233.6	123.1
O9	S2	O8	C1	289.6	337.3
N1	S2	O8	O10	117.3	247.4
N1	S2	O8	O9	248.2	112.6
O8	S2	N1	HN11	64.8	180.0
O8	S2	N1	HN12	299.6	360.0
O10	S2	O8	O9	130.9	225.3
S2	O8	C1	C2	182.5	180.1
S2	O8	C1	HC11	307.7	60.0
S2	O8	C1	HC12	57.3	300.1
HN11	N1	S2	O10	180.0	67.4
HN11	N1	S2	O9	307.9	292.7
HN11	N1	S2	O8	64.8	180.0
S2	N1	HN11	HN12	234.8	179.9
HN12	N1	S2	O10	54.8	247.3
HN12	N1	S2	O9	182.7	112.6
HN12	N1	S2	O8	299.6	360.0
S2	N1	HN12	HN11	125.1	180.1
C2	C1	O8	HC11	234.7	120.1
C2	C1	O8	HC12	125.2	240.0
O8	C1	C2	C3	302.0	192.5
O8	C1	C2	O3	176.9	66.9
O8	C1	C2	O1	58.8	303.6
HC11	C1	O8	HC12	250.5	119.9
O8	C1	C2	HC11	125.3	240.0
O8	C1	C2	HC12	234.8	120.1
HC11	C1	C2	HC12	109.5	240.1
C3	C2	C1	O3	125.2	125.6
C3	C2	C1	O1	243.2	248.9
C1	C2	C3	C4	253.6	188.7
C1	C2	C3	O2	138.9	75.8
C1	C2	C3	HC3	14.2	315.7
O3	C2	C1	O1	118.0	123.3
C1	C2	O3	C6	173.5	184.2
C1	C2	O1	C7	233.9	282.4
O8	C1	HC11	C2	239.2	120.1
O8	C1	HC11	HC12	119.6	240.1
C2	C1	HC11	HC12	240.4	119.9
HC11	C1	C2	C3	176.8	312.6
HC11	C1	C2	O3	51.6	186.9
HC11	C1	C2	O1	293.6	63.6
O8	C1	HC12	C2	120.8	239.9
O8	C1	HC12	HC11	240.4	119.9
C2	C1	HC12	HC11	119.6	240.0
HC12	C1	C2	C3	67.3	72.5
HC12	C1	C2	O3	302.1	306.8
HC12	C1	C2	O1	184.1	183.5
C3	C2	C1	HC11	176.8	312.6
C3	C2	C1	HC12	67.3	72.5
C1	C2	C3	O3	240.3	237.4
C1	C2	C3	O1	120.1	114.9
O3	C2	C3	O1	239.9	237.5
C3	C2	O3	C6	44.5	61.3
C3	C2	O1	C7	0.7	38.2
C4	C3	C2	O2	114.7	112.8
C4	C3	C2	HC3	239.4	232.9
C2	C3	C4	C5	314.1	40.6
C2	C3	C4	O4	71.2	152.9
C2	C3	C4	HC4	194.1	275.4
O2	C3	C2	HC3	124.7	120.1
C2	C3	O2	C7	327.8	24.7
O3	C2	C1	HC11	51.6	186.9
O3	C2	C1	HC12	302.1	306.8
C1	C2	O3	C3	129.0	122.9
C1	C2	O3	O1	243.8	239.5
C3	C2	O3	O1	114.8	116.6
O3	C2	C3	C4	13.3	311.3
O3	C2	C3	O2	258.6	198.5
O3	C2	C3	HC3	133.9	78.4
O3	C2	O1	C7	121.9	161.5
C5	C6	O3	C2	290.2	293.9
C2	O3	C6	HC61	164.9	173.9
C2	O3	C6	HC62	55.4	54.1
O1	C2	C1	HC11	293.6	63.6
O1	C2	C1	HC12	184.1	183.5
C1	C2	O1	C3	233.2	244.2
C1	C2	O1	O3	112.0	120.9
C3	C2	O1	O3	238.8	236.7
O1	C2	C3	C4	133.4	73.8
O1	C2	C3	O2	18.7	321.0
O1	C2	C3	HC3	254.0	200.9
O1	C2	O3	C6	289.6	304.7
O2	C7	O1	C2	340.3	336.4
C9	C7	O1	C2	101.4	216.6
C8	C7	O1	C2	225.6	96.2
C4	C3	C2	O3	13.3	311.3
C4	C3	C2	O1	133.4	73.8
C2	C3	C4	O2	246.7	250.0
C2	C3	C4	HC3	121.8	127.2
O2	C3	C4	HC3	235.2	237.2
C4	C3	O2	C7	209.0	267.4
C5	C4	C3	O4	242.9	247.7
C5	C4	C3	HC4	120.0	125.2
C3	C4	C5	C6	22.5	313.1
C3	C4	C5	O5	139.0	73.6
C3	C4	C5	HC5	262.8	191.2
O4	C4	C3	HC4	237.1	237.5
C3	C4	O4	S1	212.3	281.7
O2	C3	C2	O3	258.6	198.5
O2	C3	C2	O1	18.7	321.0
C2	C3	O2	C4	118.8	117.3
C2	C3	O2	HC3	238.8	240.0
C4	C3	O2	HC3	120.1	122.7
O2	C3	C4	C5	67.4	150.6
O2	C3	C4	O4	184.5	262.9
O2	C3	C4	HC4	307.4	25.4
C3	O2	C7	C9	271.6	117.9
C3	O2	C7	C8	148.3	238.2
C3	O2	C7	O1	32.3	358.0
HC3	C3	C2	O3	133.9	78.4
HC3	C3	C2	O1	254.0	200.9
C2	C3	HC3	C4	237.0	232.9
C2	C3	HC3	O2	117.8	113.7
C4	C3	HC3	O2	240.9	240.8
HC3	C3	C4	C5	192.2	273.5
HC3	C3	C4	O4	309.3	25.8
HC3	C3	C4	HC4	72.2	148.2
HC3	C3	O2	C7	89.0	144.8
C5	C4	C3	O2	67.4	150.6
C5	C4	C3	HC3	192.2	273.5
C3	C4	C5	O4	120.4	114.4
C3	C4	C5	HC4	243.3	234.8
O4	C4	C5	HC4	122.9	120.4
C5	C4	O4	S1	335.5	39.1
C6	C5	C4	O5	243.5	239.4
C6	C5	C4	HC5	119.7	121.9
C4	C5	C6	O3	31.8	59.6
C4	C5	C6	HC61	157.1	179.7
C4	C5	C6	HC62	266.5	299.5
O5	C5	C4	HC5	236.2	242.5
C4	C5	O5	S1	353.7	24.6
O4	C4	C3	O2	184.5	262.9
O4	C4	C3	HC3	309.3	25.8
C3	C4	O4	C5	236.8	242.6
C3	C4	O4	HC4	116.7	122.4
C5	C4	O4	HC4	239.9	239.7
O4	C4	C5	C6	262.2	198.7
O4	C4	C5	O5	18.7	319.2
O4	C4	C5	HC5	142.4	76.8
O5	S1	O4	C4	20.2	335.8
O7	S1	O4	C4	266.3	88.0
O6	S1	O4	C4	135.3	223.6
HC4	C4	C3	O2	307.4	25.4
HC4	C4	C3	HC3	72.2	148.2
C3	C4	HC4	C5	123.0	124.9
C3	C4	HC4	O4	239.9	240.3
C5	C4	HC4	O4	116.9	115.4
HC4	C4	C5	C6	139.3	78.3
HC4	C4	C5	O5	255.8	198.9
HC4	C4	C5	HC5	19.5	316.4
HC4	C4	O4	S1	95.5	159.4
C2	O3	C6	C5	290.2	293.9
C6	C5	C4	O4	262.2	198.7
C6	C5	C4	HC4	139.3	78.3
C4	C5	C6	O5	115.3	116.1
C4	C5	C6	HC5	239.2	238.0
O5	C5	C6	HC5	123.9	121.9
C6	C5	O5	S1	113.8	145.1
O3	C6	C5	HC61	234.7	239.9
O3	C6	C5	HC62	125.3	120.1
HC61	C6	C5	HC62	250.6	240.2
O5	C5	C4	O4	18.7	319.2
O5	C5	C4	HC4	255.8	198.9
C4	C5	O5	C6	239.9	239.6
C4	C5	O5	HC5	120.4	117.7
C6	C5	O5	HC5	240.5	238.1
O5	C5	C6	O3	276.4	303.5
O5	C5	C6	HC61	41.8	63.6
O5	C5	C6	HC62	151.2	183.4
C5	O5	S1	O7	109.7	246.7
C5	O5	S1	O6	236.9	111.0
C5	O5	S1	O4	352.8	358.9
HC5	C5	C4	O4	142.4	76.8
HC5	C5	C4	HC4	19.5	316.4
C4	C5	HC5	C6	122.7	122.9
C4	C5	HC5	O5	241.9	245.9
C6	C5	HC5	O5	119.3	123.0
HC5	C5	C6	O3	152.5	181.6
HC5	C5	C6	HC61	277.9	301.7
HC5	C5	C6	HC62	27.3	61.5
HC5	C5	O5	S1	233.3	267.0
C6	O3	C2	O1	289.6	304.7
O3	C6	C5	O5	276.4	303.5
O3	C6	C5	HC5	152.5	181.6
C5	C6	O3	HC61	125.3	120.0
C5	C6	O3	HC62	234.8	239.8
HC61	C6	O3	HC62	109.5	119.8
HC61	C6	C5	O5	41.8	63.6
HC61	C6	C5	HC5	277.9	301.7
C5	C6	HC61	O3	235.9	239.8
C5	C6	HC61	HC62	117.9	119.9
O3	C6	HC61	HC62	242.0	240.1
HC62	C6	C5	O5	151.2	183.4
HC62	C6	C5	HC5	27.3	61.5
C5	C6	HC62	O3	124.1	120.3
C5	C6	HC62	HC61	242.1	240.2
O3	C6	HC62	HC61	118.0	119.9
C4	O4	S1	O5	20.2	335.8
S1	O5	C5	HC5	233.3	267.0
O7	S1	O5	O6	232.8	135.7
O7	S1	O5	O4	117.0	247.8
O6	S1	O5	O4	244.1	112.1
C4	O4	S1	O7	266.3	88.0
O5	S1	O7	O6	123.5	235.9
O5	S1	O7	O4	251.8	111.9
O6	S1	O7	O4	128.3	236.0
C4	O4	S1	O6	135.3	223.6
O5	S1	O6	O7	237.3	124.1
O5	S1	O6	O4	108.3	248.1
O7	S1	O6	O4	231.0	124.0
S1	O4	C4	HC4	95.5	159.4
O5	S1	O4	O7	113.9	247.9
O5	S1	O4	O6	244.9	112.2
O7	S1	O4	O6	131.0	224.4
C2	O1	C7	O2	340.3	336.4
C7	O2	C3	HC3	89.0	144.8
C9	C7	O2	C8	123.2	239.7
C9	C7	O2	O1	239.3	119.8
O2	C7	C9	HC91	180.0	61.1
O2	C7	C9	HC92	305.2	181.1
O2	C7	C9	HC93	54.7	301.1
C8	C7	O2	O1	116.1	240.2
O2	C7	C8	HC81	180.0	162.7
O2	C7	C8	HC82	305.3	282.8
O2	C7	C8	HC83	54.7	42.8
C2	O1	C7	C9	101.4	216.6
O2	C7	C9	C8	238.8	120.4
O2	C7	C9	O1	115.4	240.8
C8	C7	C9	O1	236.7	120.5
C9	C7	C8	HC81	56.0	283.1
C9	C7	C8	HC82	181.4	43.1
C9	C7	C8	HC83	290.8	163.1
HC91	C9	C7	HC92	234.8	240.0
HC91	C9	C7	HC93	125.3	120.0
HC92	C9	C7	HC93	250.5	240.0
C2	O1	C7	C8	225.6	96.2
O2	C7	C8	C9	123.9	239.6
O2	C7	C8	O1	248.5	119.2
C9	C7	C8	O1	124.5	239.5
C8	C7	C9	HC91	301.3	300.8
C8	C7	C9	HC92	66.5	60.8
C8	C7	C9	HC93	175.9	180.7
HC81	C8	C7	HC82	234.7	240.0
HC81	C8	C7	HC83	125.2	120.0
HC82	C8	C7	HC83	250.6	240.0
O2	C7	O1	C9	238.9	119.8
O2	C7	O1	C8	114.7	240.2
C9	C7	O1	C8	235.8	120.4
O1	C7	C9	HC91	64.6	180.3
O1	C7	C9	HC92	189.8	300.3
O1	C7	C9	HC93	299.3	60.2
O1	C7	C8	HC81	291.5	43.6
O1	C7	C8	HC82	56.8	163.6
O1	C7	C8	HC83	166.3	283.6
HC91	C9	C7	C8	301.3	300.8
HC91	C9	C7	O1	64.6	180.3
C7	C9	HC91	HC92	125.2	120.0
C7	C9	HC91	HC93	234.7	240.0
HC92	C9	HC91	HC93	109.5	120.0
HC92	C9	C7	C8	66.5	60.8
HC92	C9	C7	O1	189.8	300.3
C7	C9	HC92	HC91	234.0	240.0
C7	C9	HC92	HC93	117.0	119.9
HC91	C9	HC92	HC93	243.0	240.0
HC93	C9	C7	C8	175.9	180.7
HC93	C9	C7	O1	299.3	60.2
C7	C9	HC93	HC91	126.1	120.0
C7	C9	HC93	HC92	243.0	240.0
HC91	C9	HC93	HC92	116.9	120.0
HC81	C8	C7	O1	291.5	43.6
C7	C8	HC81	HC82	125.3	120.0
C7	C8	HC81	HC83	234.8	240.1
HC82	C8	HC81	HC83	109.5	120.1
HC82	C8	C7	O1	56.8	163.6
C7	C8	HC82	HC81	237.4	240.0
C7	C8	HC82	HC83	118.7	120.0
HC81	C8	HC82	HC83	241.3	240.0
HC83	C8	C7	O1	166.3	283.6
C7	C8	HC83	HC81	122.5	119.9
C7	C8	HC83	HC82	241.3	240.0
HC81	C8	HC83	HC82	118.8	120.1