PDB Chemical Component SM2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SM2
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CAF |
CAC |
1.430 |
1.382 |
CAF |
CAE |
1.397 |
1.355 |
CAF |
HAF |
1.103 |
1.080 |
CAC |
CAB |
1.355 |
1.354 |
CAC |
HAC |
1.103 |
1.080 |
CAB |
SAD |
1.705 |
1.786 |
CAB |
HAB |
1.103 |
1.080 |
SAD |
CAE |
1.729 |
1.785 |
CAE |
CAG |
1.528 |
1.507 |
CAG |
CAH |
1.530 |
1.507 |
CAG |
HAG1 |
1.115 |
1.089 |
CAG |
HAG2 |
1.115 |
1.090 |
CAH |
OAI |
1.239 |
1.212 |
CAH |
NAJ |
1.364 |
1.349 |
NAJ |
CAK |
1.464 |
1.463 |
NAJ |
HAJ |
1.020 |
0.970 |
CAK |
B |
1.630 |
1.570 |
CAK |
CAL |
1.548 |
1.507 |
CAK |
HAK |
1.116 |
1.090 |
B |
OAT |
1.504 |
1.419 |
B |
OAO |
1.493 |
1.420 |
OAT |
HAT |
0.950 |
0.967 |
OAO |
HAO |
0.950 |
0.967 |
CAL |
CAQ |
1.408 |
1.379 |
CAL |
CAM |
1.431 |
1.384 |
CAQ |
CAR |
1.408 |
1.396 |
CAQ |
HAQ |
1.103 |
1.080 |
CAM |
CAN |
1.422 |
1.383 |
CAM |
HAM |
1.103 |
1.079 |
CAN |
CAS |
1.420 |
1.380 |
CAN |
HAN |
1.103 |
1.080 |
CAS |
CAR |
1.420 |
1.395 |
CAS |
HAS |
1.103 |
1.080 |
CAR |
CAU |
1.508 |
1.477 |
CAU |
OAW |
1.269 |
1.214 |
CAU |
OAV |
1.255 |
1.348 |
OAV |
HAV |
0.950 |
0.967 |
Bond Angles for SM2
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAC |
CAF |
CAE |
110.8 |
119.0 |
CAC |
CAF |
HAF |
125.6 |
120.5 |
CAF |
CAC |
CAB |
113.8 |
119.0 |
CAF |
CAC |
HAC |
125.5 |
120.5 |
CAE |
CAF |
HAF |
123.6 |
120.5 |
CAF |
CAE |
SAD |
111.3 |
101.9 |
CAF |
CAE |
CAG |
128.8 |
129.0 |
CAB |
CAC |
HAC |
120.8 |
120.5 |
CAC |
CAB |
SAD |
112.1 |
101.9 |
CAC |
CAB |
HAB |
114.3 |
129.1 |
SAD |
CAB |
HAB |
133.6 |
129.0 |
CAB |
SAD |
CAE |
92.1 |
98.1 |
SAD |
CAE |
CAG |
119.9 |
129.0 |
CAE |
CAG |
CAH |
109.2 |
109.4 |
CAE |
CAG |
HAG1 |
112.3 |
109.5 |
CAE |
CAG |
HAG2 |
112.3 |
109.4 |
CAH |
CAG |
HAG1 |
112.3 |
109.6 |
CAH |
CAG |
HAG2 |
112.3 |
109.4 |
CAG |
CAH |
OAI |
120.0 |
120.1 |
CAG |
CAH |
NAJ |
117.2 |
120.0 |
HAG1 |
CAG |
HAG2 |
98.1 |
109.5 |
OAI |
CAH |
NAJ |
122.8 |
120.0 |
CAH |
NAJ |
CAK |
125.2 |
120.0 |
CAH |
NAJ |
HAJ |
113.5 |
120.0 |
CAK |
NAJ |
HAJ |
121.2 |
120.0 |
NAJ |
CAK |
B |
111.1 |
109.4 |
NAJ |
CAK |
CAL |
107.5 |
109.5 |
NAJ |
CAK |
HAK |
111.4 |
109.5 |
B |
CAK |
CAL |
113.8 |
109.4 |
B |
CAK |
HAK |
104.7 |
109.5 |
CAK |
B |
OAT |
110.0 |
120.1 |
CAK |
B |
OAO |
110.1 |
120.0 |
CAL |
CAK |
HAK |
108.5 |
109.5 |
CAK |
CAL |
CAQ |
120.8 |
120.0 |
CAK |
CAL |
CAM |
119.6 |
119.9 |
OAT |
B |
OAO |
109.3 |
120.0 |
B |
OAT |
HAT |
110.0 |
106.8 |
B |
OAO |
HAO |
110.1 |
106.8 |
CAQ |
CAL |
CAM |
119.5 |
120.1 |
CAL |
CAQ |
CAR |
121.6 |
119.9 |
CAL |
CAQ |
HAQ |
119.2 |
120.0 |
CAL |
CAM |
CAN |
119.0 |
120.3 |
CAL |
CAM |
HAM |
120.8 |
119.8 |
CAR |
CAQ |
HAQ |
119.1 |
120.1 |
CAQ |
CAR |
CAS |
119.3 |
119.7 |
CAQ |
CAR |
CAU |
118.6 |
120.2 |
CAN |
CAM |
HAM |
120.2 |
119.9 |
CAM |
CAN |
CAS |
120.7 |
120.2 |
CAM |
CAN |
HAN |
119.7 |
119.9 |
CAS |
CAN |
HAN |
119.6 |
119.9 |
CAN |
CAS |
CAR |
119.8 |
119.8 |
CAN |
CAS |
HAS |
120.1 |
120.0 |
CAR |
CAS |
HAS |
120.1 |
120.1 |
CAS |
CAR |
CAU |
122.1 |
120.1 |
CAR |
CAU |
OAW |
117.4 |
120.0 |
CAR |
CAU |
OAV |
116.6 |
120.0 |
OAW |
CAU |
OAV |
126.0 |
120.0 |
CAU |
OAV |
HAV |
116.6 |
120.0 |
Torsion Angles for SM2
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAE |
CAF |
CAC |
HAF |
180.0 |
180.5 |
CAC |
CAF |
CAE |
SAD |
0.2 |
359.6 |
CAC |
CAF |
CAE |
CAG |
179.7 |
179.8 |
CAB |
CAC |
CAF |
HAC |
180.0 |
180.2 |
CAF |
CAC |
CAB |
SAD |
0.0 |
359.7 |
CAF |
CAC |
CAB |
HAB |
180.0 |
179.7 |
CAC |
CAF |
CAE |
HAF |
180.0 |
179.5 |
CAE |
CAF |
CAC |
CAB |
359.9 |
0.5 |
CAE |
CAF |
CAC |
HAC |
179.9 |
180.3 |
CAB |
SAD |
CAE |
CAF |
359.8 |
0.2 |
SAD |
CAE |
CAF |
CAG |
180.5 |
179.8 |
CAF |
CAE |
CAG |
CAH |
131.1 |
89.8 |
CAF |
CAE |
CAG |
HAG1 |
5.9 |
329.7 |
CAF |
CAE |
CAG |
HAG2 |
256.4 |
209.7 |
CAC |
CAF |
HAF |
CAE |
180.0 |
180.5 |
HAF |
CAF |
CAC |
CAB |
179.9 |
180.0 |
HAF |
CAF |
CAC |
HAC |
359.9 |
359.8 |
HAF |
CAF |
CAE |
SAD |
180.2 |
180.1 |
HAF |
CAF |
CAE |
CAG |
359.7 |
0.3 |
CAB |
CAC |
CAF |
CAE |
359.9 |
0.5 |
CAB |
CAC |
CAF |
HAF |
179.9 |
180.0 |
CAF |
CAC |
CAB |
HAC |
180.0 |
179.8 |
SAD |
CAB |
CAC |
HAB |
180.0 |
180.0 |
CAC |
CAB |
SAD |
CAE |
0.1 |
0.0 |
HAC |
CAC |
CAF |
CAE |
179.9 |
180.3 |
HAC |
CAC |
CAF |
HAF |
359.9 |
359.8 |
CAF |
CAC |
HAC |
CAB |
180.0 |
180.2 |
HAC |
CAC |
CAB |
SAD |
180.0 |
179.9 |
HAC |
CAC |
CAB |
HAB |
360.0 |
359.9 |
CAF |
CAE |
SAD |
CAB |
359.8 |
0.2 |
SAD |
CAB |
CAC |
HAC |
180.0 |
179.9 |
CAC |
CAB |
SAD |
HAB |
180.0 |
180.0 |
CAB |
SAD |
CAE |
CAG |
180.3 |
180.0 |
HAB |
CAB |
CAC |
HAC |
360.0 |
359.9 |
CAC |
CAB |
HAB |
SAD |
180.0 |
180.0 |
HAB |
CAB |
SAD |
CAE |
180.1 |
180.0 |
SAD |
CAE |
CAF |
HAF |
180.2 |
180.1 |
CAF |
CAE |
SAD |
CAG |
179.5 |
180.2 |
CAE |
SAD |
CAB |
HAB |
180.1 |
180.0 |
SAD |
CAE |
CAG |
CAH |
310.5 |
270.0 |
SAD |
CAE |
CAG |
HAG1 |
185.3 |
150.0 |
SAD |
CAE |
CAG |
HAG2 |
75.8 |
29.9 |
CAG |
CAE |
CAF |
HAF |
359.7 |
0.3 |
CAF |
CAE |
CAG |
SAD |
180.6 |
179.7 |
CAH |
CAG |
CAE |
HAG1 |
125.2 |
120.1 |
CAH |
CAG |
CAE |
HAG2 |
234.7 |
240.1 |
CAE |
CAG |
CAH |
OAI |
294.7 |
360.0 |
CAE |
CAG |
CAH |
NAJ |
113.9 |
180.0 |
HAG1 |
CAG |
CAE |
HAG2 |
109.5 |
120.0 |
CAE |
CAG |
CAH |
HAG1 |
234.8 |
240.0 |
CAE |
CAG |
CAH |
HAG2 |
125.3 |
119.9 |
HAG1 |
CAG |
CAH |
HAG2 |
250.5 |
239.9 |
OAI |
CAH |
CAG |
NAJ |
180.7 |
179.9 |
CAG |
CAH |
NAJ |
CAK |
181.3 |
180.0 |
CAG |
CAH |
NAJ |
HAJ |
1.3 |
359.9 |
CAE |
CAG |
HAG1 |
CAH |
123.5 |
120.0 |
CAE |
CAG |
HAG1 |
HAG2 |
241.8 |
240.0 |
CAH |
CAG |
HAG1 |
HAG2 |
118.2 |
120.0 |
HAG1 |
CAG |
CAH |
OAI |
59.9 |
120.0 |
HAG1 |
CAG |
CAH |
NAJ |
239.2 |
300.0 |
CAE |
CAG |
HAG2 |
CAH |
236.4 |
240.1 |
CAE |
CAG |
HAG2 |
HAG1 |
118.2 |
120.0 |
CAH |
CAG |
HAG2 |
HAG1 |
241.8 |
239.9 |
HAG2 |
CAG |
CAH |
OAI |
169.4 |
240.1 |
HAG2 |
CAG |
CAH |
NAJ |
348.7 |
60.1 |
OAI |
CAH |
CAG |
HAG1 |
59.9 |
120.0 |
OAI |
CAH |
CAG |
HAG2 |
169.4 |
240.1 |
CAG |
CAH |
OAI |
NAJ |
179.2 |
180.1 |
OAI |
CAH |
NAJ |
CAK |
0.5 |
0.0 |
OAI |
CAH |
NAJ |
HAJ |
180.5 |
179.9 |
NAJ |
CAH |
CAG |
HAG1 |
239.2 |
300.0 |
NAJ |
CAH |
CAG |
HAG2 |
348.7 |
60.1 |
CAG |
CAH |
NAJ |
OAI |
180.8 |
179.9 |
CAK |
NAJ |
CAH |
HAJ |
180.0 |
180.1 |
CAH |
NAJ |
CAK |
B |
197.8 |
269.9 |
CAH |
NAJ |
CAK |
CAL |
72.7 |
150.0 |
CAH |
NAJ |
CAK |
HAK |
314.0 |
29.9 |
CAH |
NAJ |
CAK |
HAJ |
180.0 |
179.9 |
B |
CAK |
NAJ |
CAL |
125.0 |
119.9 |
B |
CAK |
NAJ |
HAK |
243.7 |
240.0 |
NAJ |
CAK |
B |
OAT |
322.2 |
300.0 |
NAJ |
CAK |
B |
OAO |
201.7 |
120.1 |
CAL |
CAK |
NAJ |
HAK |
118.7 |
120.0 |
NAJ |
CAK |
CAL |
CAQ |
71.2 |
209.6 |
NAJ |
CAK |
CAL |
CAM |
255.0 |
30.0 |
CAH |
NAJ |
HAJ |
CAK |
180.0 |
180.1 |
HAJ |
NAJ |
CAK |
B |
17.8 |
90.0 |
HAJ |
NAJ |
CAK |
CAL |
252.7 |
330.1 |
HAJ |
NAJ |
CAK |
HAK |
134.0 |
210.0 |
B |
CAK |
NAJ |
HAJ |
17.8 |
90.0 |
NAJ |
CAK |
B |
CAL |
238.6 |
240.0 |
NAJ |
CAK |
B |
HAK |
120.3 |
120.0 |
CAL |
CAK |
B |
HAK |
241.7 |
240.0 |
B |
CAK |
CAL |
CAQ |
307.9 |
89.7 |
B |
CAK |
CAL |
CAM |
131.6 |
270.0 |
OAT |
B |
CAK |
OAO |
120.5 |
180.0 |
CAK |
B |
OAT |
HAT |
180.0 |
360.0 |
CAK |
B |
OAO |
HAO |
180.0 |
360.0 |
CAL |
CAK |
NAJ |
HAJ |
252.7 |
330.1 |
NAJ |
CAK |
CAL |
B |
123.4 |
119.9 |
NAJ |
CAK |
CAL |
HAK |
239.5 |
239.9 |
B |
CAK |
CAL |
HAK |
116.1 |
120.0 |
CAL |
CAK |
B |
OAT |
83.6 |
60.0 |
CAL |
CAK |
B |
OAO |
323.1 |
240.0 |
CAQ |
CAL |
CAK |
CAM |
176.3 |
179.7 |
CAK |
CAL |
CAQ |
CAR |
184.9 |
179.7 |
CAK |
CAL |
CAQ |
HAQ |
4.9 |
0.3 |
CAK |
CAL |
CAM |
CAN |
175.0 |
180.0 |
CAK |
CAL |
CAM |
HAM |
355.0 |
0.0 |
HAK |
CAK |
NAJ |
HAJ |
134.0 |
210.0 |
NAJ |
CAK |
HAK |
B |
239.9 |
240.0 |
NAJ |
CAK |
HAK |
CAL |
118.1 |
120.0 |
B |
CAK |
HAK |
CAL |
238.2 |
240.0 |
HAK |
CAK |
B |
OAT |
201.9 |
180.0 |
HAK |
CAK |
B |
OAO |
81.4 |
0.0 |
HAK |
CAK |
CAL |
CAQ |
191.8 |
329.7 |
HAK |
CAK |
CAL |
CAM |
15.5 |
150.0 |
OAT |
B |
CAK |
CAL |
83.6 |
60.0 |
OAT |
B |
CAK |
HAK |
201.9 |
180.0 |
CAK |
B |
OAT |
OAO |
239.0 |
180.0 |
OAT |
B |
OAO |
HAO |
59.0 |
180.0 |
OAO |
B |
CAK |
CAL |
323.1 |
240.0 |
OAO |
B |
CAK |
HAK |
81.4 |
0.0 |
CAK |
B |
OAO |
OAT |
120.9 |
180.0 |
OAO |
B |
OAT |
HAT |
301.0 |
179.9 |
HAT |
OAT |
B |
OAO |
301.0 |
179.9 |
CAQ |
CAL |
CAK |
HAK |
191.8 |
329.7 |
CAK |
CAL |
CAQ |
CAM |
183.7 |
180.3 |
CAQ |
CAL |
CAM |
CAN |
358.7 |
0.3 |
CAQ |
CAL |
CAM |
HAM |
178.7 |
180.3 |
CAR |
CAQ |
CAL |
HAQ |
180.0 |
179.5 |
CAL |
CAQ |
CAR |
CAS |
359.5 |
0.5 |
CAL |
CAQ |
CAR |
CAU |
179.6 |
180.3 |
CAM |
CAL |
CAK |
HAK |
15.5 |
150.0 |
CAK |
CAL |
CAM |
CAQ |
176.3 |
179.7 |
CAM |
CAL |
CAQ |
CAR |
1.2 |
359.4 |
CAM |
CAL |
CAQ |
HAQ |
181.2 |
179.9 |
CAN |
CAM |
CAL |
HAM |
180.0 |
180.0 |
CAL |
CAM |
CAN |
CAS |
0.7 |
0.0 |
CAL |
CAM |
CAN |
HAN |
180.7 |
179.9 |
CAR |
CAQ |
CAL |
CAM |
1.2 |
359.4 |
CAL |
CAQ |
CAR |
HAQ |
180.0 |
180.5 |
CAN |
CAS |
CAR |
CAQ |
359.8 |
359.8 |
CAQ |
CAR |
CAS |
HAS |
179.8 |
179.8 |
CAS |
CAR |
CAQ |
CAU |
179.9 |
180.2 |
CAQ |
CAR |
CAU |
OAW |
272.1 |
0.2 |
CAQ |
CAR |
CAU |
OAV |
90.3 |
180.3 |
HAQ |
CAQ |
CAL |
CAM |
181.2 |
179.9 |
CAL |
CAQ |
HAQ |
CAR |
180.0 |
179.5 |
HAQ |
CAQ |
CAR |
CAS |
179.5 |
180.0 |
HAQ |
CAQ |
CAR |
CAU |
359.6 |
359.8 |
CAL |
CAM |
CAN |
HAM |
180.0 |
180.0 |
CAS |
CAN |
CAM |
HAN |
180.0 |
180.1 |
CAM |
CAN |
CAS |
CAR |
0.0 |
359.9 |
CAM |
CAN |
CAS |
HAS |
180.0 |
179.9 |
CAL |
CAM |
HAM |
CAN |
180.0 |
180.0 |
HAM |
CAM |
CAN |
CAS |
180.7 |
180.0 |
HAM |
CAM |
CAN |
HAN |
0.7 |
359.9 |
CAQ |
CAR |
CAS |
CAN |
359.8 |
359.8 |
CAS |
CAN |
CAM |
HAM |
180.7 |
180.0 |
CAM |
CAN |
CAS |
HAN |
180.0 |
179.9 |
CAR |
CAS |
CAN |
HAS |
180.0 |
180.0 |
CAN |
CAS |
CAR |
CAU |
179.7 |
180.0 |
HAN |
CAN |
CAM |
HAM |
0.7 |
359.9 |
CAM |
CAN |
HAN |
CAS |
180.0 |
180.1 |
HAN |
CAN |
CAS |
CAR |
180.0 |
180.1 |
HAN |
CAN |
CAS |
HAS |
0.1 |
0.1 |
CAS |
CAR |
CAQ |
HAQ |
179.5 |
180.0 |
CAQ |
CAR |
CAS |
CAU |
180.1 |
179.8 |
CAR |
CAS |
CAN |
HAN |
180.0 |
180.1 |
CAN |
CAS |
CAR |
HAS |
180.0 |
180.0 |
CAS |
CAR |
CAU |
OAW |
92.2 |
180.0 |
CAS |
CAR |
CAU |
OAV |
270.4 |
0.0 |
HAS |
CAS |
CAN |
HAN |
0.1 |
0.1 |
CAN |
CAS |
HAS |
CAR |
180.0 |
180.0 |
HAS |
CAS |
CAR |
CAU |
359.7 |
0.0 |
CAU |
CAR |
CAQ |
HAQ |
359.6 |
359.8 |
CAQ |
CAR |
CAU |
CAS |
179.9 |
180.2 |
CAU |
CAR |
CAS |
HAS |
359.7 |
0.0 |
OAW |
CAU |
CAR |
OAV |
181.8 |
179.9 |
CAR |
CAU |
OAV |
HAV |
180.0 |
180.0 |
CAR |
CAU |
OAW |
OAV |
178.0 |
180.1 |
OAW |
CAU |
OAV |
HAV |
358.0 |
0.1 |
CAR |
CAU |
OAV |
OAW |
182.0 |
179.9 |