PDB Chemical Component SL0

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SL0

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.543 1.508
C1 H733 1.100 1.090
C1 H731 1.100 1.090
C1 H732 1.100 1.090
C2 O2 1.386 1.342
C2 O1 1.243 1.208
O2 C3 1.395 1.452
C3 C5 1.541 1.532
C3 H23 1.100 1.091
C4 C3 1.463 1.532
C4 C10 1.532 1.531
C4 H22 1.100 1.089
O3 C4 1.396 1.429
O3 H1 0.951 0.967
C5 O4 1.389 1.452
C5 C8 1.511 1.531
C5 H24 1.100 1.090
C6 C7 1.493 1.507
C6 O4 1.385 1.342
O5 C6 1.241 1.209
C7 H643 1.100 1.091
C7 H642 1.100 1.089
C7 H641 1.100 1.090
C8 C9 1.531 1.530
C8 H25 1.100 1.090
C9 H512 1.099 1.090
C9 H513 1.100 1.090
C9 H511 1.100 1.091
O6 C8 1.390 1.428
C10 O6 1.391 1.428
C10 O7 1.412 1.429
C10 H21 1.100 1.090
O7 C11 1.400 1.361
C11 C12 1.534 1.420
C11 C13 1.337 1.363
C12 C25 1.535 1.471
O8 C12 1.240 1.220
C13 C14 1.528 1.474
C13 O10 1.395 1.344
C14 C19 1.401 1.399
C15 C16 1.403 1.378
C15 C14 1.385 1.397
C15 H12 1.080 1.080
C16 C17 1.393 1.389
C16 H13 1.080 1.080
C17 O9 1.392 1.358
C17 C18 1.401 1.390
C18 H15 1.080 1.080
C19 C18 1.389 1.377
C19 H16 1.080 1.080
O10 C20 1.507 1.349
C20 C21 1.366 1.387
C21 C22 1.364 1.386
C21 H8 1.080 1.080
C22 O11 1.363 1.358
C23 C22 1.389 1.391
C23 H6 1.080 1.080
C24 C23 1.384 1.382
C25 C24 1.372 1.401
C25 C20 1.369 1.405
O12 C24 1.416 1.357
O9 H221 0.950 0.966
O11 H231 0.950 0.967
O12 H241 0.950 0.966

Bond Angles for SL0

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 H733 109.5 109.5
C2 C1 H731 109.4 109.5
C2 C1 H732 109.4 109.5
C1 C2 O2 119.5 120.0
C1 C2 O1 120.2 120.0
H733 C1 H731 109.5 109.5
H733 C1 H732 109.5 109.5
H731 C1 H732 109.5 109.4
O1 C2 O2 119.8 120.1
C2 O2 C3 117.3 117.0
O2 C3 C5 109.7 109.6
O2 C3 H23 109.0 109.5
C5 C3 H23 108.4 109.5
C4 C3 C5 111.6 109.1
C3 C5 O4 110.6 109.5
C3 C5 C8 109.1 109.1
C3 C5 H24 110.0 109.5
C4 C3 H23 107.1 109.6
C10 C4 H22 108.4 109.6
O3 C4 C10 109.6 109.5
C4 C10 O6 107.3 109.5
C4 C10 O7 107.3 109.4
C4 C10 H21 114.2 109.4
O3 C4 H22 110.4 109.6
O4 C5 C8 112.2 109.5
O4 C5 H24 106.7 109.5
C8 C5 H24 108.2 109.6
C5 C8 C9 112.2 109.4
C5 C8 H25 106.4 109.5
O5 C6 C7 120.3 120.0
C6 C7 H643 109.5 109.4
C6 C7 H642 109.5 109.5
C6 C7 H641 109.5 109.5
H643 C7 H642 109.4 109.4
H643 C7 H641 109.5 109.4
H642 C7 H641 109.5 109.5
C9 C8 H25 107.4 109.5
C8 C9 H512 109.5 109.5
C8 C9 H513 109.5 109.5
C8 C9 H511 109.5 109.5
O6 C8 H25 107.7 109.5
H512 C9 H513 109.5 109.5
H512 C9 H511 109.5 109.5
H513 C9 H511 109.5 109.4
O7 C10 H21 106.7 109.5
C10 O7 C11 113.7 117.0
O7 C11 C12 119.7 120.3
O7 C11 C13 121.0 120.3
C12 C11 C13 119.3 119.5
C11 C12 C25 118.7 117.4
C11 C13 C14 126.4 118.8
C11 C13 O10 122.2 122.4
O8 C12 C25 119.3 121.3
C12 C25 C24 123.6 121.2
C12 C25 C20 117.8 118.6
C14 C13 O10 111.4 118.8
C13 C14 C19 118.7 120.1
C13 O10 C20 122.2 122.3
C15 C14 C19 121.6 119.8
C14 C19 C18 119.7 119.9
C14 C19 H16 120.1 120.0
C16 C15 H12 120.6 120.1
C15 C16 C17 119.6 120.1
C15 C16 H13 120.2 119.9
C17 C16 H13 120.2 120.0
C16 C17 O9 118.9 119.9
C16 C17 C18 121.4 120.2
O9 C17 C18 119.6 119.9
C17 O9 H221 109.5 114.0
C17 C18 H15 120.6 120.0
C19 C18 H15 120.7 119.9
O10 C20 C21 117.1 120.7
C20 C21 C22 117.6 120.1
C20 C21 H8 121.2 120.0
C22 C21 H8 121.2 119.9
C21 C22 O11 116.4 119.7
C22 O11 H231 109.5 114.0
C24 C23 H6 120.5 120.0

Torsion Angles for SL0

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H733 C1 C2 H731 240.0 240.0
H733 C1 C2 H732 120.0 120.0
H731 C1 C2 H732 240.0 240.1
O1 C2 C1 O2 187.2 180.0
C1 C2 O2 C3 169.7 180.0
C2 C1 H733 H731 120.0 120.0
C2 C1 H733 H732 240.0 240.0
H733 C1 C2 O2 172.8 90.0
H733 C1 C2 O1 0.0 270.0
H731 C1 H733 H732 120.1 120.0
C2 C1 H731 H733 240.0 240.0
C2 C1 H731 H732 120.0 120.0
H731 C1 C2 O2 292.8 210.0
H731 C1 C2 O1 120.0 30.1
H733 C1 H731 H732 240.0 240.0
C2 C1 H732 H733 120.0 120.0
C2 C1 H732 H731 240.0 240.0
H732 C1 C2 O2 52.8 329.9
H732 C1 C2 O1 240.0 150.0
H733 C1 H732 H731 120.0 120.0
O2 C2 C1 H733 172.8 90.0
O2 C2 C1 H731 292.8 210.0
O2 C2 C1 H732 52.8 329.9
C1 C2 O2 O1 187.1 180.0
C2 O2 C3 C5 226.5 210.0
C2 O2 C3 H23 345.0 330.2
O1 C2 C1 H733 0.0 270.0
O1 C2 C1 H731 120.0 30.1
O1 C2 C1 H732 240.0 150.0
C1 C2 O1 O2 172.8 180.0
O1 C2 O2 C3 342.6 360.0
C5 C3 O2 H23 241.5 239.9
C4 C3 O2 C5 236.2 240.4
O2 C3 C5 O4 61.7 63.2
O2 C3 C5 C8 185.5 183.1
O2 C3 C5 H24 304.1 303.1
C4 C3 O2 H23 117.7 120.2
O2 C3 C5 H23 118.9 120.1
C4 C3 C5 H23 242.3 240.0
O4 C5 C3 C8 236.1 240.1
O4 C5 C3 H24 117.6 120.1
C8 C5 C3 H24 241.4 240.0
C3 C5 C8 C9 173.9 177.6
C3 C5 C8 H25 291.1 297.6
O2 C3 H23 C5 240.6 239.8
C4 C3 H23 C5 120.5 119.6
H23 C3 C5 O4 302.7 303.1
H23 C3 C5 C8 66.6 63.0
H23 C3 C5 H24 185.2 183.0
O2 C3 C4 C5 122.7 119.9
O2 C3 C4 H23 241.2 239.8
C5 C3 C4 H23 118.4 119.9
C4 C3 C5 O4 185.1 183.1
C4 C3 C5 C8 309.0 303.0
C4 C3 C5 H24 67.5 63.0
C10 C4 C3 C5 56.1 56.9
C10 C4 C3 H23 297.7 297.0
O3 C4 C10 H22 239.4 239.7
O7 C10 C4 H21 241.9 240.0
C4 C10 O7 C11 187.4 165.9
H22 C4 C3 C5 175.5 176.9
H22 C4 C3 H23 57.0 56.9
O3 C4 H22 C10 120.1 120.2
H22 C4 C10 O6 182.7 182.5
H22 C4 C10 O7 306.5 302.6
H22 C4 C10 H21 64.6 62.5
O3 C4 C3 C5 296.0 297.1
O3 C4 C3 H23 177.6 177.2
C10 C4 O3 H22 119.3 120.2
O3 C4 C10 O6 62.1 62.3
O3 C4 C10 O7 185.9 182.3
O3 C4 C10 H21 304.0 302.3
H1 O3 C4 C10 59.4 65.7
H1 O3 C4 H22 300.1 305.5
O4 C5 C3 H23 302.7 303.1
C3 C5 O4 C8 122.0 119.7
C3 C5 O4 H24 240.4 239.9
C8 C5 O4 H24 118.4 120.2
O4 C5 C8 C9 296.9 297.5
O4 C5 C8 H25 54.0 57.5
C8 C5 C3 H23 66.6 63.0
C3 C5 C8 O4 237.1 240.1
C3 C5 C8 H24 119.6 119.9
O4 C5 C8 H24 242.5 239.8
C9 C8 C5 H25 242.8 240.0
C5 C8 C9 H512 180.0 60.0
C5 C8 C9 H513 300.0 180.0
C5 C8 C9 H511 60.0 300.0
O6 C8 C5 H25 117.4 120.1
H24 C5 C3 H23 185.2 183.0
C3 C5 H24 O4 120.0 120.1
C3 C5 H24 C8 240.9 240.3
O4 C5 H24 C8 120.9 120.2
H24 C5 C8 C9 54.3 57.7
H24 C5 C8 H25 171.5 177.6
H643 C7 C6 H642 240.0 240.0
H643 C7 C6 H641 120.0 120.0
H642 C7 C6 H641 240.0 239.9
C6 O4 C5 C8 129.3 90.3
C6 O4 C5 H24 10.9 330.1
O5 C6 C7 H643 0.0 270.0
O5 C6 C7 H642 120.0 30.0
O5 C6 C7 H641 240.0 150.1
C6 C7 H643 H642 120.0 120.0
C6 C7 H643 H641 240.0 240.0
H642 C7 H643 H641 120.0 120.0
C6 C7 H642 H643 240.0 240.0
C6 C7 H642 H641 120.0 120.1
H643 C7 H642 H641 240.0 240.0
C6 C7 H641 H643 120.1 119.9
C6 C7 H641 H642 240.0 239.9
H643 C7 H641 H642 120.0 120.0
C9 C8 C5 H24 54.3 57.7
C5 C8 C9 H25 116.6 120.0
O6 C8 C9 H25 242.5 239.9
H512 C9 C8 H513 240.0 240.0
H512 C9 C8 H511 120.0 120.0
H513 C9 C8 H511 240.0 240.0
H25 C8 C5 H24 171.5 177.6
C5 C8 H25 C9 239.7 240.0
H25 C8 C9 H512 63.4 300.0
H25 C8 C9 H513 183.4 60.0
H25 C8 C9 H511 303.4 180.0
H512 C9 C8 H25 63.4 300.0
C8 C9 H512 H513 120.0 120.0
C8 C9 H512 H511 240.0 240.0
H513 C9 H512 H511 120.0 120.0
H513 C9 C8 H25 183.4 60.0
C8 C9 H513 H512 240.0 240.0
C8 C9 H513 H511 120.0 120.0
H512 C9 H513 H511 240.0 240.0
H511 C9 C8 H25 303.4 180.0
C8 C9 H511 H512 120.0 120.0
C8 C9 H511 H513 240.0 240.0
H512 C9 H511 H513 120.0 120.0
C4 C10 O6 C8 59.3 61.2
O6 C8 C5 H24 288.9 297.7
C5 C8 O6 H25 243.4 240.0
C9 C8 O6 H25 117.3 120.0
O6 C8 C9 H512 306.0 179.9
O6 C8 C9 H513 65.9 299.9
O6 C8 C9 H511 186.0 59.9
O6 C10 C4 H22 182.7 182.5
C4 C10 O6 O7 119.2 120.0
C4 C10 O6 H21 237.2 240.1
C10 O6 C8 H25 59.5 58.8
O7 C10 C4 H22 306.5 302.6
C4 C10 O7 O6 240.9 240.0
C4 C10 O7 H21 122.8 119.9
C10 O7 C11 C12 299.0 297.9
C10 O7 C11 C13 120.2 117.6
H21 C10 C4 H22 64.6 62.5
C4 C10 H21 O6 118.4 120.0
C4 C10 H21 O7 241.5 240.1
H21 C10 O7 C11 64.6 46.0
C11 O7 C10 H21 64.6 46.0
C12 C11 O7 C13 178.8 180.3
O7 C11 C12 C25 180.3 180.0
O7 C11 C13 C14 2.3 0.1
O7 C11 C13 O10 179.6 180.0
O7 C11 C12 C13 181.1 179.7
C12 C11 C13 C14 183.5 179.7
C12 C11 C13 O10 0.8 359.7
O8 C12 C11 C25 181.5 179.9
C11 C12 C25 C24 179.9 179.5
C11 C12 C25 C20 1.6 359.9
O7 C11 C13 C12 178.8 180.3
C13 C11 C12 C25 359.1 0.3
C14 C13 C11 O10 182.7 180.0
C11 C13 C14 C19 201.0 228.0
C11 C13 O10 C20 358.6 360.0
C25 C12 C11 C13 359.1 0.3
O8 C12 C11 C13 180.6 180.2
C11 C12 O8 C25 178.5 180.1
O8 C12 C25 C24 358.5 359.6
O8 C12 C25 C20 180.1 180.0
C11 C13 C14 O10 177.5 180.0
C14 C13 O10 C20 176.3 180.0
C15 C14 C13 C19 188.3 180.3
C13 C14 C19 C18 183.0 179.8
C13 C14 C19 H16 3.0 0.1
C11 C13 O10 C14 182.3 180.0
O10 C13 C14 C19 23.5 48.0
C13 O10 C20 C21 179.5 180.0
C19 C14 C13 O10 23.5 48.0
C14 C19 C18 H15 182.8 180.3
C16 C15 C14 C19 5.6 0.2
C17 C16 C15 H13 180.0 180.0
C15 C16 C17 O9 180.2 180.0
C15 C16 C17 C18 0.5 360.0
C15 C14 C13 O10 211.7 228.3
C13 C14 C15 C19 171.5 179.7
C15 C14 C19 C18 354.5 359.5
C15 C14 C19 H16 174.5 179.8
H12 C15 C14 C19 185.6 180.3
H12 C15 C16 C17 177.0 180.0
H12 C15 C16 H13 357.0 360.0
C17 C16 C15 H12 177.0 180.0
C15 C16 C17 H13 180.0 180.0
O9 C17 C16 C18 179.8 180.0
C16 C17 O9 H221 180.0 90.0
C16 C17 C18 H15 179.6 180.0
H13 C16 C15 H12 357.0 360.0
C15 C16 H13 C17 180.0 180.0
H13 C16 C17 O9 0.2 360.0
H13 C16 C17 C18 180.5 180.0
O9 C17 C16 H13 0.2 360.0
C16 C17 O9 C18 180.2 180.0
O9 C17 C18 H15 359.9 360.0
C14 C19 C18 C17 2.8 0.6
C18 C17 C16 H13 180.5 180.0
C16 C17 C18 O9 179.8 180.0
C18 C17 O9 H221 359.8 270.0
C19 C18 C17 H15 180.0 179.7
C14 C19 C18 H16 180.0 180.3
C17 C18 C19 H15 180.0 180.3
C14 C19 H16 C18 180.0 179.7
H16 C19 C18 H15 2.8 360.0
C12 C25 C20 O10 357.8 359.8
O10 C20 C21 C22 180.3 180.0
O10 C20 C21 H8 0.2 360.0
C12 C25 C20 C21 180.7 180.0
C22 C21 C20 H8 180.0 180.1
C20 C21 C22 O11 180.1 180.0
C20 C21 C22 H8 180.0 179.9
C21 C22 O11 H231 180.0 90.0
C20 C21 H8 C22 180.0 180.1
H8 C21 C22 O11 0.1 0.1
O11 C22 C21 H8 0.1 0.1
C23 C22 C21 H8 181.9 180.1
C23 C22 O11 H231 358.2 270.0
C12 C25 C24 C23 180.3 179.9
C12 C25 C24 C20 181.7 180.5
C25 C24 C23 H6 180.8 180.3
C12 C25 C20 C24 178.4 179.6
C25 C20 C21 H8 177.5 179.7
O12 C24 C23 H6 0.7 360.0
H221 O9 C17 C18 359.8 270.0