PDB Chemical Component SKT
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SKT
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O08 |
C07 |
1.274 |
1.215 |
| C02 |
C03 |
1.473 |
1.501 |
| C02 |
C01 |
1.333 |
1.316 |
| C07 |
C01 |
1.517 |
1.470 |
| C07 |
O09 |
1.266 |
1.347 |
| O10 |
C03 |
1.400 |
1.429 |
| C03 |
C04 |
1.536 |
1.530 |
| C01 |
C06 |
1.470 |
1.500 |
| C04 |
O11 |
1.408 |
1.429 |
| C04 |
C05 |
1.529 |
1.533 |
| C06 |
C05 |
1.527 |
1.530 |
| C05 |
O12 |
1.447 |
1.429 |
| O12 |
C13 |
1.362 |
1.350 |
| O17 |
C13 |
1.236 |
1.216 |
| C13 |
C14 |
1.473 |
1.418 |
| C14 |
C15 |
1.346 |
1.351 |
| C15 |
C16 |
1.445 |
1.469 |
| C16 |
C18 |
1.397 |
1.401 |
| C16 |
C22 |
1.394 |
1.400 |
| C18 |
C19 |
1.379 |
1.377 |
| C22 |
C21 |
1.382 |
1.376 |
| C19 |
C20 |
1.394 |
1.390 |
| C21 |
C20 |
1.401 |
1.390 |
| C20 |
O23 |
1.380 |
1.357 |
| C02 |
H6 |
1.080 |
1.080 |
| C03 |
H5 |
1.100 |
1.089 |
| C04 |
H4 |
1.100 |
1.090 |
| C05 |
H3 |
1.101 |
1.090 |
| C06 |
H1 |
1.100 |
1.090 |
| C06 |
H2 |
1.099 |
1.090 |
| O09 |
H7 |
0.950 |
0.967 |
| O10 |
H8 |
0.950 |
0.968 |
| O11 |
H9 |
0.950 |
0.967 |
| C14 |
H10 |
1.080 |
1.080 |
| C15 |
H11 |
1.080 |
1.080 |
| C18 |
H12 |
1.080 |
1.080 |
| C19 |
H13 |
1.080 |
1.080 |
| C21 |
H14 |
1.080 |
1.081 |
| C22 |
H15 |
1.080 |
1.080 |
| O23 |
H16 |
0.950 |
0.967 |
Bond Angles for SKT
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O08 |
C07 |
O09 |
127.6 |
120.0 |
| C02 |
C03 |
C04 |
110.3 |
110.1 |
| C03 |
C02 |
H6 |
119.1 |
118.1 |
| C02 |
C03 |
H5 |
109.1 |
109.4 |
| C02 |
C01 |
C06 |
124.6 |
123.8 |
| C07 |
O09 |
H7 |
109.5 |
117.0 |
| O10 |
C03 |
H5 |
110.1 |
109.3 |
| C03 |
C04 |
O11 |
111.9 |
109.6 |
| C03 |
C04 |
C05 |
105.4 |
108.5 |
| C04 |
C03 |
H5 |
108.3 |
109.3 |
| C03 |
C04 |
H4 |
107.5 |
109.6 |
| C01 |
C06 |
C05 |
111.6 |
110.1 |
| C01 |
C06 |
H1 |
108.9 |
109.3 |
| C01 |
C06 |
H2 |
108.9 |
109.4 |
| C05 |
C04 |
O11 |
114.8 |
109.7 |
| O11 |
C04 |
H4 |
109.2 |
109.6 |
| C04 |
O11 |
H9 |
109.5 |
114.0 |
| C04 |
C05 |
O12 |
110.0 |
109.7 |
| C05 |
C04 |
H4 |
107.6 |
109.8 |
| C04 |
C05 |
H3 |
109.7 |
109.7 |
| C06 |
C05 |
O12 |
105.8 |
109.6 |
| C06 |
C05 |
H3 |
109.7 |
109.8 |
| C05 |
O12 |
C13 |
118.5 |
117.0 |
| O12 |
C05 |
H3 |
110.8 |
109.6 |
| O12 |
C13 |
C14 |
114.8 |
120.0 |
| C13 |
C14 |
C15 |
118.6 |
120.0 |
| C13 |
C14 |
H10 |
120.7 |
120.0 |
| C14 |
C15 |
C16 |
125.2 |
120.0 |
| C15 |
C14 |
H10 |
120.7 |
120.0 |
| C14 |
C15 |
H11 |
117.4 |
120.0 |
| C15 |
C16 |
C18 |
117.5 |
120.1 |
| C15 |
C16 |
C22 |
122.9 |
120.1 |
| C16 |
C15 |
H11 |
117.4 |
120.0 |
| C18 |
C16 |
C22 |
119.5 |
119.7 |
| C16 |
C18 |
C19 |
120.7 |
119.9 |
| C16 |
C18 |
H12 |
119.7 |
120.0 |
| C16 |
C22 |
C21 |
120.5 |
119.9 |
| C16 |
C22 |
H15 |
119.8 |
120.0 |
| C18 |
C19 |
C20 |
119.3 |
120.2 |
| C19 |
C18 |
H12 |
119.6 |
120.1 |
| C18 |
C19 |
H13 |
120.3 |
119.9 |
| C22 |
C21 |
H14 |
120.3 |
120.0 |
| C19 |
C20 |
O23 |
121.7 |
119.9 |
| C20 |
C19 |
H13 |
120.4 |
119.9 |
| C21 |
C20 |
O23 |
117.7 |
119.9 |
| C20 |
O23 |
H16 |
109.5 |
114.0 |
| H1 |
C06 |
H2 |
109.5 |
109.3 |
Torsion Angles for SKT
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O08 |
C07 |
O09 |
H7 |
0.0 |
0.0 |
| C03 |
C02 |
C01 |
C06 |
0.9 |
359.5 |
| O10 |
C03 |
C02 |
H5 |
119.5 |
119.7 |
| C02 |
C03 |
C04 |
O11 |
177.0 |
190.5 |
| C02 |
C03 |
C04 |
C05 |
302.5 |
310.3 |
| C04 |
C03 |
C02 |
H5 |
241.1 |
239.8 |
| C02 |
C03 |
C04 |
H4 |
57.1 |
70.1 |
| C02 |
C01 |
C06 |
C05 |
6.1 |
17.2 |
| C02 |
C01 |
C06 |
H1 |
126.4 |
137.4 |
| C02 |
C01 |
C06 |
H2 |
245.7 |
257.0 |
| C07 |
C01 |
C06 |
H1 |
306.6 |
317.6 |
| C07 |
C01 |
C06 |
H2 |
66.0 |
77.2 |
| O10 |
C03 |
C02 |
H6 |
84.5 |
77.0 |
| C02 |
C03 |
O10 |
H5 |
241.2 |
240.3 |
| O10 |
C03 |
C04 |
O11 |
296.4 |
310.7 |
| C04 |
C03 |
O10 |
H5 |
120.2 |
119.6 |
| O10 |
C03 |
C04 |
H4 |
176.5 |
190.4 |
| C04 |
C03 |
C02 |
H6 |
206.2 |
197.2 |
| C02 |
C03 |
C04 |
H5 |
119.4 |
120.2 |
| O10 |
C03 |
C04 |
H5 |
238.7 |
240.4 |
| C05 |
C04 |
C03 |
O11 |
125.5 |
119.7 |
| O11 |
C04 |
C03 |
H4 |
119.9 |
120.4 |
| C03 |
C04 |
O11 |
H9 |
180.0 |
300.0 |
| C03 |
C04 |
C05 |
O12 |
182.7 |
187.8 |
| C05 |
C04 |
C03 |
H4 |
245.4 |
240.1 |
| C03 |
C04 |
C05 |
H3 |
304.8 |
308.1 |
| C01 |
C06 |
C05 |
O12 |
200.4 |
190.5 |
| C01 |
C06 |
C05 |
H3 |
80.9 |
70.1 |
| H1 |
C06 |
C01 |
H2 |
240.6 |
240.4 |
| C03 |
C04 |
O11 |
C05 |
120.1 |
119.0 |
| O11 |
C04 |
C03 |
H5 |
57.6 |
70.3 |
| C03 |
C04 |
O11 |
H4 |
241.1 |
239.6 |
| O11 |
C04 |
C05 |
O12 |
306.3 |
307.5 |
| C05 |
C04 |
O11 |
H4 |
121.0 |
120.6 |
| O11 |
C04 |
C05 |
H3 |
68.4 |
67.9 |
| C03 |
C04 |
C05 |
O11 |
236.4 |
240.3 |
| C05 |
C04 |
C03 |
H5 |
183.1 |
190.0 |
| C03 |
C04 |
C05 |
H4 |
114.6 |
119.8 |
| C01 |
C06 |
C05 |
C04 |
319.7 |
310.2 |
| O11 |
C04 |
C05 |
H4 |
238.2 |
239.5 |
| C05 |
C04 |
O11 |
H9 |
59.9 |
181.0 |
| C06 |
C05 |
C04 |
O12 |
243.4 |
240.3 |
| C06 |
C05 |
C04 |
H3 |
121.3 |
119.9 |
| C04 |
C05 |
O12 |
C13 |
91.4 |
150.0 |
| O12 |
C05 |
C04 |
H3 |
237.9 |
239.6 |
| C01 |
C06 |
C05 |
H1 |
120.3 |
120.2 |
| C01 |
C06 |
C05 |
H2 |
239.7 |
239.8 |
| C06 |
C05 |
C04 |
O11 |
189.7 |
187.8 |
| C04 |
C05 |
C06 |
O12 |
119.2 |
119.7 |
| C06 |
C05 |
C04 |
H4 |
311.5 |
308.2 |
| C04 |
C05 |
C06 |
H3 |
238.7 |
240.1 |
| C06 |
C05 |
O12 |
C13 |
211.2 |
269.0 |
| O12 |
C05 |
C06 |
H3 |
119.5 |
120.4 |
| O12 |
C05 |
C04 |
O11 |
306.3 |
307.5 |
| O12 |
C05 |
C04 |
H4 |
68.1 |
67.9 |
| C04 |
C05 |
O12 |
H3 |
121.4 |
120.4 |
| C06 |
C05 |
O12 |
H3 |
241.2 |
239.4 |
| C05 |
O12 |
C13 |
C14 |
204.5 |
180.0 |
| C13 |
O12 |
C05 |
H3 |
330.0 |
29.6 |
| O12 |
C13 |
C14 |
C15 |
185.4 |
180.0 |
| O12 |
C13 |
C14 |
H10 |
5.4 |
0.0 |
| O17 |
C13 |
C14 |
H10 |
187.5 |
180.0 |
| C13 |
C14 |
C15 |
C16 |
183.2 |
180.0 |
| C15 |
C14 |
C13 |
H10 |
180.0 |
180.0 |
| C13 |
C14 |
C15 |
H11 |
3.2 |
0.0 |
| C13 |
C14 |
C15 |
H10 |
180.0 |
180.0 |
| C14 |
C15 |
C16 |
C18 |
160.1 |
180.0 |
| C14 |
C15 |
C16 |
C22 |
343.4 |
359.7 |
| C16 |
C15 |
C14 |
H11 |
180.0 |
180.0 |
| C16 |
C15 |
C14 |
H10 |
3.2 |
360.0 |
| C14 |
C15 |
C16 |
H11 |
180.0 |
180.0 |
| C18 |
C16 |
C15 |
C22 |
176.8 |
180.3 |
| C15 |
C16 |
C18 |
C19 |
181.7 |
180.0 |
| C15 |
C16 |
C18 |
H12 |
1.7 |
0.0 |
| C15 |
C16 |
C22 |
C21 |
179.0 |
179.7 |
| C15 |
C16 |
C22 |
H15 |
359.0 |
0.0 |
| C15 |
C16 |
C18 |
C22 |
183.1 |
179.7 |
| C18 |
C16 |
C15 |
H11 |
340.1 |
360.0 |
| C18 |
C16 |
C22 |
C21 |
2.3 |
359.4 |
| C18 |
C16 |
C22 |
H15 |
182.3 |
179.7 |
| C16 |
C18 |
C19 |
C20 |
359.8 |
0.0 |
| C19 |
C18 |
C16 |
H12 |
180.0 |
179.9 |
| C16 |
C18 |
C19 |
H13 |
179.7 |
180.0 |
| C15 |
C16 |
C22 |
C18 |
176.7 |
180.3 |
| C22 |
C16 |
C15 |
H11 |
163.4 |
179.7 |
| C22 |
C16 |
C18 |
C19 |
358.6 |
0.2 |
| C22 |
C16 |
C18 |
H12 |
178.6 |
180.3 |
| C16 |
C22 |
C21 |
H14 |
178.5 |
180.3 |
| C19 |
C18 |
C16 |
C22 |
358.6 |
0.2 |
| C16 |
C18 |
C19 |
H12 |
180.0 |
180.1 |
| C18 |
C19 |
C20 |
O23 |
180.2 |
180.0 |
| C20 |
C19 |
C18 |
H13 |
180.0 |
180.1 |
| C16 |
C22 |
C21 |
H15 |
180.0 |
180.3 |
| C22 |
C21 |
C20 |
O23 |
180.6 |
179.7 |
| C20 |
C19 |
C18 |
H12 |
179.8 |
180.0 |
| C18 |
C19 |
C20 |
H13 |
180.0 |
179.9 |
| C21 |
C20 |
C19 |
O23 |
180.9 |
180.0 |
| C19 |
C20 |
O23 |
H16 |
180.0 |
90.0 |
| C16 |
C22 |
C21 |
C20 |
358.5 |
0.6 |
| C19 |
C20 |
C21 |
O23 |
179.1 |
180.0 |
| C21 |
C20 |
C19 |
H13 |
181.1 |
180.0 |
| C21 |
C20 |
O23 |
H16 |
359.1 |
270.0 |
| O23 |
C20 |
C19 |
H13 |
0.2 |
0.0 |
| H6 |
C02 |
C03 |
C04 |
206.2 |
197.2 |
| H6 |
C02 |
C03 |
H5 |
325.1 |
317.4 |
| H6 |
C02 |
C01 |
C06 |
180.9 |
179.5 |
| C02 |
C03 |
H5 |
C04 |
239.9 |
239.3 |
| H5 |
C03 |
C02 |
H6 |
325.1 |
317.4 |
| H5 |
C03 |
C04 |
O11 |
57.6 |
70.3 |
| H5 |
C03 |
C04 |
C05 |
183.1 |
190.0 |
| H5 |
C03 |
C04 |
H4 |
297.8 |
309.9 |
| C03 |
C04 |
H4 |
O11 |
121.6 |
120.4 |
| C03 |
C04 |
H4 |
C05 |
246.9 |
240.9 |
| H4 |
C04 |
C03 |
H5 |
297.8 |
309.9 |
| C05 |
C04 |
H4 |
O11 |
234.7 |
239.5 |
| H4 |
C04 |
O11 |
H9 |
298.9 |
60.4 |
| H4 |
C04 |
C05 |
O12 |
68.1 |
67.9 |
| H4 |
C04 |
C05 |
H3 |
190.2 |
188.3 |
| H3 |
C05 |
C04 |
O11 |
68.4 |
67.9 |
| C04 |
C05 |
H3 |
O12 |
238.3 |
239.6 |
| H3 |
C05 |
C04 |
H4 |
190.2 |
188.3 |
| C06 |
C05 |
H3 |
O12 |
116.4 |
120.4 |
| H3 |
C05 |
O12 |
C13 |
330.0 |
29.6 |
| C01 |
C06 |
H1 |
C05 |
238.0 |
239.3 |
| C01 |
C06 |
H1 |
H2 |
119.0 |
119.7 |
| H1 |
C06 |
C05 |
O12 |
80.1 |
70.3 |
| H1 |
C06 |
C05 |
H3 |
320.6 |
309.9 |
| C01 |
C06 |
H2 |
C05 |
122.0 |
120.7 |
| C01 |
C06 |
H2 |
H1 |
241.0 |
240.4 |
| H2 |
C06 |
C05 |
O12 |
320.8 |
310.7 |
| H2 |
C06 |
C05 |
H3 |
201.2 |
190.3 |
| H8 |
O10 |
C03 |
H5 |
298.8 |
59.7 |
| H9 |
O11 |
C04 |
H4 |
298.9 |
60.4 |
| C13 |
C14 |
H10 |
C15 |
180.0 |
180.0 |
| H10 |
C14 |
C15 |
C16 |
3.2 |
360.0 |
| H10 |
C14 |
C15 |
H11 |
183.2 |
180.0 |
| C14 |
C15 |
H11 |
C16 |
180.0 |
180.0 |
| H11 |
C15 |
C14 |
H10 |
183.2 |
180.0 |
| H11 |
C15 |
C16 |
C18 |
340.1 |
360.0 |
| H11 |
C15 |
C16 |
C22 |
163.4 |
179.7 |
| H12 |
C18 |
C16 |
C22 |
178.6 |
180.3 |
| C16 |
C18 |
H12 |
C19 |
180.0 |
179.9 |
| H12 |
C18 |
C19 |
C20 |
179.8 |
180.0 |
| H12 |
C18 |
C19 |
H13 |
359.7 |
359.9 |
| C18 |
C19 |
H13 |
C20 |
180.0 |
180.1 |
| H13 |
C19 |
C18 |
H12 |
359.7 |
359.9 |
| H13 |
C19 |
C20 |
O23 |
0.2 |
0.0 |
| H14 |
C21 |
C20 |
O23 |
0.7 |
360.0 |
| C16 |
C22 |
H15 |
C21 |
180.0 |
179.7 |
| H15 |
C22 |
C21 |
H14 |
358.5 |
0.0 |