PDB Chemical Component SKA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SKA

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CL4 C4 1.732 1.736
C4 C5 1.394 1.387
C4 C3 1.395 1.383
C5 C11 1.531 1.506
C5 C6 1.395 1.379
C11 N10 1.474 1.465
C11 H111 1.100 1.090
C11 H112 1.100 1.090
N10 C9 1.470 1.470
N10 H10 1.000 1.009
C9 C8 1.531 1.529
C9 H91 1.100 1.091
C9 H92 1.099 1.090
C8 C6 1.532 1.509
C8 H81 1.100 1.090
C8 H82 1.100 1.089
C6 C1 1.389 1.385
C1 C2 1.393 1.381
C1 H1 1.080 1.081
C2 C3 1.389 1.384
C2 H2 1.080 1.080
C3 CL3 1.730 1.736

Bond Angles for SKA

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CL4 C4 C5 119.5 119.9
CL4 C4 C3 119.6 119.8
C5 C4 C3 120.9 120.3
C4 C5 C11 121.9 118.8
C4 C5 C6 118.7 119.7
C4 C3 C2 119.8 119.9
C4 C3 CL3 121.9 120.1
C11 C5 C6 119.4 121.5
C5 C11 N10 111.4 110.8
C5 C11 H111 108.4 109.2
C5 C11 H112 108.9 109.3
C5 C6 C8 122.7 121.0
C5 C6 C1 120.5 120.1
N10 C11 H111 108.4 109.2
N10 C11 H112 108.9 109.2
C11 N10 C9 111.1 106.6
C11 N10 H10 108.9 106.7
H111 C11 H112 111.0 109.2
C9 N10 H10 108.9 106.7
N10 C9 C8 108.5 108.8
N10 C9 H91 110.0 109.6
N10 C9 H92 109.8 109.6
C8 C9 H91 110.0 109.6
C8 C9 H92 109.8 109.6
C9 C8 C6 110.5 109.4
C9 C8 H81 108.9 109.5
C9 C8 H82 109.1 109.5
H91 C9 H92 108.8 109.7
C6 C8 H81 108.9 109.4
C6 C8 H82 109.1 109.5
C8 C6 C1 116.8 119.0
H81 C8 H82 110.3 109.5
C6 C1 C2 120.4 120.3
C6 C1 H1 119.8 119.9
C2 C1 H1 119.8 119.9
C1 C2 C3 119.6 119.8
C1 C2 H2 120.2 120.1
C3 C2 H2 120.2 120.1
C2 C3 CL3 118.3 120.0

Torsion Angles for SKA

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C5 C4 CL4 C3 179.4 180.3
CL4 C4 C5 C11 359.4 359.9
CL4 C4 C5 C6 180.6 180.3
CL4 C4 C3 C2 179.4 179.7
CL4 C4 C3 CL3 359.4 360.0
CL4 C4 C5 C3 180.6 179.7
C5 C4 C3 C2 360.0 359.4
C5 C4 C3 CL3 179.9 179.7
C11 C5 C4 C6 178.9 179.6
C4 C5 C11 N10 162.1 159.7
C4 C5 C11 H111 42.9 39.4
C4 C5 C11 H112 282.1 280.0
C4 C5 C6 C8 180.5 179.8
C4 C5 C6 C1 0.0 359.7
CL4 C4 C3 C5 179.4 180.3
C3 C4 C5 C11 178.9 180.2
C3 C4 C5 C6 0.0 0.6
C1 C2 C3 C4 0.0 0.3
C4 C3 C2 H2 180.0 180.2
C2 C3 C4 CL3 180.1 179.7
C11 C5 C4 C3 178.9 180.2
C4 C5 C11 C6 181.2 180.4
C11 C5 C6 C8 1.6 0.1
C11 C5 C6 C1 181.1 180.1
N10 C11 C5 H111 119.2 120.3
N10 C11 C5 H112 240.0 239.6
C5 C11 N10 C9 53.8 56.4
C5 C11 N10 H10 173.8 170.2
H111 C11 C5 H112 120.8 119.4
C6 C5 C4 C3 0.0 0.6
C4 C5 C6 C11 178.9 179.6
C6 C5 C11 N10 340.9 339.3
C6 C5 C11 H111 221.7 219.0
C6 C5 C11 H112 100.9 99.6
C9 C8 C6 C5 343.5 344.6
C5 C6 C8 H81 103.1 104.6
C5 C6 C8 H82 223.5 224.6
C8 C6 C5 C1 180.4 180.1
C5 C6 C1 C2 360.0 0.0
C5 C6 C1 H1 180.0 180.0
N10 C11 C5 C6 340.9 339.3
C5 C11 N10 H111 240.8 239.7
C5 C11 N10 H112 120.0 120.4
H111 C11 N10 H112 239.2 240.6
C9 N10 C11 H10 240.0 246.2
C11 N10 C9 C8 289.6 285.4
C11 N10 C9 H91 169.3 165.6
C11 N10 C9 H92 49.6 45.2
H111 C11 C5 C6 221.7 219.0
C5 C11 H111 N10 121.0 121.2
C5 C11 H111 H112 240.5 240.6
N10 C11 H111 H112 119.5 119.4
H111 C11 N10 C9 173.0 176.7
H111 C11 N10 H10 293.0 290.4
H112 C11 C5 C6 100.9 99.6
C5 C11 H112 N10 238.4 238.7
C5 C11 H112 H111 119.2 119.4
N10 C11 H112 H111 240.8 240.6
H112 C11 N10 C9 293.8 296.1
H112 C11 N10 H10 53.8 49.8
C9 N10 C11 H111 173.0 176.7
C9 N10 C11 H112 293.8 296.1
C11 N10 C9 H10 120.0 113.8
C8 C9 N10 H91 120.4 119.8
C8 C9 N10 H92 240.0 240.2
N10 C9 C8 C6 48.7 51.8
N10 C9 C8 H81 289.1 291.9
N10 C9 C8 H82 168.7 171.8
H91 C9 N10 H92 119.7 120.4
H10 N10 C11 H111 293.0 290.4
H10 N10 C11 H112 53.8 49.8
C11 N10 H10 C9 238.6 246.3
H10 N10 C9 C8 169.6 171.6
H10 N10 C9 H91 49.2 51.8
H10 N10 C9 H92 289.6 291.4
C5 C6 C8 C9 343.5 344.6
C8 C9 N10 H10 169.6 171.6
N10 C9 C8 H91 239.7 240.2
N10 C9 C8 H92 120.0 119.8
H91 C9 C8 H92 240.4 239.6
C6 C8 C9 H81 119.6 120.0
C6 C8 C9 H82 240.0 240.0
C9 C8 C6 C1 163.9 164.7
H81 C8 C9 H82 120.4 120.0
H91 C9 N10 H10 49.2 51.8
N10 C9 H91 C8 119.5 119.3
N10 C9 H91 H92 239.7 239.6
C8 C9 H91 H92 120.2 120.3
H91 C9 C8 C6 169.1 171.6
H91 C9 C8 H81 49.5 51.7
H91 C9 C8 H82 289.1 291.6
H92 C9 N10 H10 289.6 291.4
N10 C9 H92 C8 240.8 240.7
N10 C9 H92 H91 120.4 120.4
C8 C9 H92 H91 239.6 239.7
H92 C9 C8 C6 288.7 292.0
H92 C9 C8 H81 169.1 172.1
H92 C9 C8 H82 48.7 52.0
C5 C6 C8 C1 179.6 179.9
C6 C8 C9 H91 169.1 171.6
C6 C8 C9 H92 288.7 292.0
C9 C8 C6 H81 240.4 240.0
C9 C8 C6 H82 120.0 120.0
H81 C8 C6 H82 239.5 240.0
C8 C6 C1 C2 179.5 179.9
C8 C6 C1 H1 359.5 359.9
H81 C8 C9 H91 49.5 51.7
H81 C8 C9 H92 169.1 172.1
C9 C8 H81 C6 120.6 119.9
C9 C8 H81 H82 240.3 239.9
C6 C8 H81 H82 119.7 120.0
H81 C8 C6 C1 283.5 284.7
H82 C8 C9 H91 289.1 291.6
H82 C8 C9 H92 48.7 52.0
C9 C8 H82 C6 239.1 240.0
C9 C8 H82 H81 119.5 120.1
C6 C8 H82 H81 240.4 240.0
H82 C8 C6 C1 44.0 44.6
C5 C6 C1 C8 180.4 180.1
C1 C6 C8 H81 283.5 284.7
C1 C6 C8 H82 44.0 44.6
C2 C1 C6 H1 180.0 180.0
C6 C1 C2 C3 0.0 360.0
C6 C1 C2 H2 180.0 180.1
C4 C3 C2 C1 0.0 0.3
C6 C1 C2 H1 180.0 180.0
C3 C2 C1 H2 180.0 179.9
C1 C2 C3 CL3 180.1 180.0
C6 C1 H1 C2 180.0 180.0
H1 C1 C2 C3 180.0 180.0
H1 C1 C2 H2 0.0 0.1
C4 C3 C2 CL3 180.0 180.3
C3 C2 C1 H1 180.0 180.0
C1 C2 C3 H2 180.0 180.1
H2 C2 C1 H1 0.0 0.1
C1 C2 H2 C3 180.0 179.9
H2 C2 C3 CL3 0.1 360.0
C4 C3 CL3 C2 180.1 179.7
CL3 C3 C2 H2 0.1 360.0