PDB Chemical Component SK3

Ideal Model

Chemical Description

Name (1R,2R,3S,4S,5R)-5-(BENZYLAMINO)CYCLOPENTANE-1,2,3,4-TETROL
Formula C12 H17 N O4
Formal charge 0
Molecular weight 239.268 g/mol
Component type NON-POLYMER

Chemical features

Atom count 34
Chiral atom count 5
Chiral atoms C5 C4 C3 C2 C1
Bond count 35
Aromatic bond count 6

Chemical Identifiers

Systematic name (ACDLabs) (1R,2R,3S,4S,5r)-5-(benzylamino)cyclopentane-1,2,3,4-tetrol
Systematic name (OpenEye OEToolkits) (1S,2S,3R,4R)-5-(phenylmethylamino)cyclopentane-1,2,3,4-tetrol

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1[C@@H](O)[C@@H](O)[C@@H](NCc2ccccc2)[C@H]1O
SMILES (CACTVS) O[CH]1[CH](O)[CH](O)[CH](NCc2ccccc2)[CH]1O
Stereo SMILES (OpenEye) c1ccc(cc1)CNC2[C@H]([C@H]([C@H]([C@H]2O)O)O)O
InChI descriptor InChI=1S/C12H17NO4/c14-9-8(10(15)12(17)11(9)16)13-6-7-4-2-1-3-5-7/h1-5,8-17H,6H2/t8-,9+,10-,11+,12-
InChIKey descriptor AQARFUBRAYWQBH-NMZKHRHQSA-N

Status Information

Last modified 2011-06-04
Created 2006-01-24
Release status REL
Model PDB code 2F7R
Processing site RCSB