PDB Chemical Component SJR

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SJR

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C	O	1.415	1.429
N	C5	1.352	1.348
N	C6	1.405	1.392
O	C1	1.373	1.357
C1	C2	1.383	1.390
C1	C12	1.390	1.390
N1	C6	1.337	1.324
N1	C10	1.343	1.320
O1	C5	1.233	1.216
C2	C3	1.385	1.377
C3	C4	1.394	1.397
C4	C5	1.492	1.476
C4	C11	1.392	1.397
C6	C7	1.401	1.391
C7	C8	1.386	1.383
C8	C9	1.374	1.388
C9	C10	1.378	1.381
C11	C12	1.385	1.378
C	H	1.100	1.090
C	HA	1.100	1.090
C	HB	1.099	1.090
N	HN	1.000	0.970
C2	H2	1.080	1.080
C3	H3	1.080	1.080
C7	H7	1.080	1.081
C8	H8	1.080	1.080
C9	H9	1.080	1.080
C10	H10	1.080	1.080
C11	H11	1.079	1.080
C12	H12	1.080	1.080

Bond Angles for SJR

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C	O	C1	118.5	117.0
O	C	H	109.5	109.4
O	C	HA	109.5	109.5
O	C	HB	109.5	109.5
C5	N	C6	127.3	120.0
N	C5	O1	123.7	120.0
N	C5	C4	115.4	120.0
C5	N	HN	116.3	120.0
N	C6	N1	114.7	119.7
N	C6	C7	122.4	119.7
C6	N	HN	116.4	120.0
O	C1	C2	114.4	119.9
O	C1	C12	125.2	119.9
C2	C1	C12	120.4	120.2
C1	C2	C3	119.6	120.1
C1	C2	H2	120.2	119.9
C1	C12	C11	119.8	120.1
C1	C12	H12	120.1	120.0
C6	N1	C10	117.4	121.6
N1	C6	C7	122.9	120.6
N1	C10	C9	123.8	120.8
N1	C10	H10	118.1	119.6
O1	C5	C4	120.9	120.0
C2	C3	C4	120.6	119.9
C3	C2	H2	120.2	120.0
C2	C3	H3	119.7	120.1
C3	C4	C5	118.3	120.1
C3	C4	C11	119.2	119.8
C4	C3	H3	119.7	120.0
C5	C4	C11	122.4	120.1
C4	C11	C12	120.3	119.9
C4	C11	H11	119.9	120.1
C6	C7	C8	117.8	119.1
C6	C7	H7	121.1	120.4
C7	C8	C9	119.9	118.5
C8	C7	H7	121.1	120.5
C7	C8	H8	120.1	120.7
C8	C9	C10	118.2	119.3
C9	C8	H8	120.0	120.7
C8	C9	H9	120.9	120.4
C10	C9	H9	120.9	120.3
C9	C10	H10	118.1	119.6
C12	C11	H11	119.8	120.1
C11	C12	H12	120.1	119.9
H	C	HA	109.4	109.5
H	C	HB	109.5	109.5
HA	C	HB	109.5	109.5

Torsion Angles for SJR

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C	O	C1	C2	181.7	179.9
C	O	C1	C12	0.1	359.7
H	C	O	HA	240.0	240.1
H	C	O	HB	120.0	120.0
HA	C	O	HB	240.0	239.9
C5	N	C6	N1	154.0	5.1
C5	N	C6	C7	334.8	185.1
C6	N	C5	HN	180.0	180.1
O1	C5	N	C4	179.7	180.0
C3	C4	C5	N	141.0	180.0
N	C5	C4	C11	320.2	0.0
C6	N	C5	O1	357.6	354.9
C6	N	C5	C4	177.9	175.0
C5	N	C6	HN	180.0	179.9
N	C6	N1	C10	181.2	180.1
N1	C6	N	C7	179.2	180.0
N	C6	C7	C8	178.8	180.0
N	C6	C7	H7	358.8	359.9
C1	O	C	H	180.0	60.0
C1	O	C	HA	300.0	179.9
C1	O	C	HB	60.0	300.0
C2	C1	O	C12	181.7	180.2
O	C1	C2	C3	175.8	180.0
O	C1	C2	H2	355.8	0.1
O	C1	C12	C11	182.9	179.7
O	C1	C12	H12	2.9	360.0
O	C1	C2	C12	178.4	179.8
C2	C1	C12	C11	1.1	359.5
C2	C1	C12	H12	181.1	179.8
C1	C2	C3	C4	2.4	0.0
C3	C2	C1	H2	180.0	179.9
C1	C2	C3	H3	182.4	179.9
O	C1	C12	C2	181.8	180.2
C12	C1	C2	C3	357.3	0.2
C12	C1	C2	H2	177.4	180.3
C4	C11	C12	C1	0.6	0.5
C1	C12	C11	H11	180.6	180.3
C11	C12	C1	H12	180.0	179.8
N	C6	N1	C7	180.8	180.0
N1	C6	N	HN	334.0	185.1
C6	N1	C10	C9	359.7	359.9
C6	N1	C10	H10	179.7	180.0
N1	C6	C7	C8	359.7	0.0
N1	C6	C7	H7	179.7	179.9
C10	N1	C6	C7	0.4	0.0
C8	C9	C10	N1	0.1	360.0
N1	C10	C9	H9	180.1	180.1
C9	C10	N1	H10	180.0	179.9
O1	C5	N	C6	357.6	354.9
N	C5	O1	C4	180.3	180.0
O1	C5	N	HN	177.6	174.8
C3	C4	C5	O1	321.3	0.1
O1	C5	C4	C11	140.5	180.1
C3	C2	C1	C12	357.3	0.2
C1	C2	C3	H2	180.0	180.1
C2	C3	C4	C5	178.5	180.0
C2	C3	C4	C11	359.3	360.0
C4	C3	C2	H3	180.0	180.1
N	C5	C4	C3	141.0	180.0
O1	C5	C4	C3	321.3	0.1
C4	C3	C2	H2	182.4	180.0
C2	C3	C4	H3	180.0	179.9
C5	C4	C3	C11	179.2	180.0
C3	C4	C11	C12	359.2	359.8
C3	C4	C11	H11	179.2	180.0
C4	C5	N	C6	177.9	175.0
N	C5	C4	O1	179.7	180.0
C4	C5	N	HN	357.9	354.9
C3	C4	C5	C11	180.8	180.0
C5	C4	C3	H3	358.5	0.1
C5	C4	C11	C12	180.0	179.8
C5	C4	C11	H11	0.0	359.9
C1	C12	C11	C4	0.6	0.5
C3	C4	C11	C5	179.2	180.0
C11	C4	C3	H3	179.3	180.1
C12	C11	C4	H11	180.0	179.8
C4	C11	C12	H12	180.6	180.2
N	C6	C7	N1	179.2	180.0
C7	C6	N	HN	154.8	5.2
C7	C6	N1	C10	0.4	0.0
C6	C7	C8	C9	0.1	359.9
C8	C7	C6	H7	180.0	180.1
C6	C7	C8	H8	180.1	180.0
C6	C7	C8	H7	180.0	179.9
C7	C8	C9	C10	360.0	0.1
C9	C8	C7	H8	180.0	179.9
C7	C8	C9	H9	180.0	180.0
N1	C10	C9	C8	0.1	360.0
C9	C8	C7	H7	180.1	180.0
C7	C8	C9	H8	180.0	180.1
C10	C9	C8	H9	180.0	180.1
C8	C9	C10	H10	180.1	179.9
N1	C10	C9	H10	180.0	180.1
C10	C9	C8	H8	180.0	180.0
C8	C9	C10	H9	180.0	179.9
C1	C12	C11	H12	180.0	180.2
C4	C11	C12	H11	180.0	180.2
H	C	O	C1	180.0	60.0
O	C	H	HA	120.0	119.9
O	C	H	HB	240.0	240.0
HA	C	H	HB	120.0	120.1
HA	C	O	C1	300.0	179.9
O	C	HA	H	240.0	240.1
O	C	HA	HB	120.0	120.0
H	C	HA	HB	240.0	239.9
HB	C	O	C1	60.0	300.0
O	C	HB	H	120.0	120.0
O	C	HB	HA	240.0	240.0
H	C	HB	HA	120.0	120.0
C5	N	HN	C6	180.0	180.1
HN	N	C5	O1	177.6	174.8
HN	N	C5	C4	357.9	354.9
HN	N	C6	N1	334.0	185.1
HN	N	C6	C7	154.8	5.2
H2	C2	C1	C12	177.4	180.3
C1	C2	H2	C3	180.0	179.9
H2	C2	C3	C4	182.4	180.0
H2	C2	C3	H3	2.4	359.9
C2	C3	H3	C4	180.0	180.1
H3	C3	C2	H2	2.4	359.9
H3	C3	C4	C5	358.5	0.1
H3	C3	C4	C11	179.3	180.1
C6	C7	H7	C8	180.0	180.1
H7	C7	C8	C9	180.1	180.0
H7	C7	C8	H8	0.1	0.1
C7	C8	H8	C9	180.0	179.9
H8	C8	C7	H7	0.1	0.1
H8	C8	C9	C10	180.0	180.0
H8	C8	C9	H9	360.0	359.9
C8	C9	H9	C10	180.0	180.1
H9	C9	C8	H8	360.0	359.9
H9	C9	C10	H10	0.1	0.0
N1	C10	H10	C9	180.0	179.9
H10	C10	C9	H9	0.1	0.0
C4	C11	H11	C12	180.0	179.8
H11	C11	C12	H12	0.6	0.1
C1	C12	H12	C11	180.0	179.8
H12	C12	C11	H11	0.6	0.1