PDB Chemical Component SHH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SHH

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 N1 1.405 1.416
O1 HO1 0.950 0.967
O2 C1 1.204 1.212
N1 C1 1.371 1.348
N1 HN1 1.021 0.970
C1 C2 1.451 1.507
C2 C3 1.522 1.530
C2 H21 1.116 1.090
C2 H22 1.115 1.089
C3 C4 1.513 1.530
C3 H31 1.115 1.089
C3 H32 1.115 1.090
C4 C5 1.510 1.530
C4 H41 1.115 1.089
C4 H42 1.115 1.090
C5 C6 1.515 1.528
C5 H51 1.115 1.089
C5 H52 1.115 1.090
C6 C7 1.512 1.530
C6 H61 1.115 1.089
C6 H62 1.115 1.090
C7 C8 1.500 1.508
C7 H71 1.116 1.089
C7 H72 1.115 1.089
C8 O3 1.221 1.212
C8 N2 1.348 1.347
N2 C9 1.512 1.400
N2 HN2 1.020 0.970
C9 C10 1.440 1.387
C9 C14 1.445 1.389
C10 C11 1.468 1.381
C10 H101 1.103 1.080
C11 C12 1.426 1.382
C11 H111 1.103 1.080
C12 C13 1.472 1.382
C12 H121 1.102 1.080
C13 C14 1.482 1.381
C13 H131 1.103 1.080
C14 H141 1.103 1.080

Bond Angles for SHH

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
N1 O1 HO1 119.2 106.8
O1 N1 C1 119.2 120.0
O1 N1 HN1 121.6 120.0
O2 C1 N1 120.8 120.0
O2 C1 C2 121.7 120.0
C1 N1 HN1 119.2 120.0
N1 C1 C2 116.9 120.0
C1 C2 C3 114.4 109.5
C1 C2 H21 110.4 109.5
C1 C2 H22 110.5 109.5
C3 C2 H21 110.4 109.5
C3 C2 H22 110.4 109.4
C2 C3 C4 111.2 109.5
C2 C3 H31 111.6 109.5
C2 C3 H32 111.6 109.4
H21 C2 H22 99.8 109.5
C4 C3 H31 111.5 109.5
C4 C3 H32 111.5 109.4
C3 C4 C5 109.4 109.5
C3 C4 H41 112.3 109.5
C3 C4 H42 112.3 109.4
H31 C3 H32 98.9 109.4
C5 C4 H41 112.2 109.5
C5 C4 H42 112.2 109.4
C4 C5 C6 104.4 109.5
C4 C5 H51 114.1 109.5
C4 C5 H52 114.1 109.4
H41 C4 H42 98.2 109.4
C6 C5 H51 114.1 109.5
C6 C5 H52 114.1 109.5
C5 C6 C7 111.3 109.5
C5 C6 H61 111.6 109.5
C5 C6 H62 111.5 109.5
H51 C5 H52 96.4 109.4
C7 C6 H61 111.5 109.5
C7 C6 H62 111.5 109.4
C6 C7 C8 109.7 109.5
C6 C7 H71 112.1 109.5
C6 C7 H72 112.1 109.4
H61 C6 H62 98.8 109.4
C8 C7 H71 112.1 109.5
C8 C7 H72 112.1 109.4
C7 C8 O3 125.2 120.0
C7 C8 N2 111.4 120.0
H71 C7 H72 98.3 109.5
O3 C8 N2 123.4 120.0
C8 N2 C9 132.6 120.0
C8 N2 HN2 106.3 120.0
C9 N2 HN2 121.2 120.0
N2 C9 C10 116.0 120.1
N2 C9 C14 122.9 120.1
C10 C9 C14 121.1 119.9
C9 C10 C11 120.0 119.9
C9 C10 H101 119.0 120.0
C9 C14 C13 117.4 119.9
C9 C14 H141 120.1 120.0
C11 C10 H101 121.0 120.0
C10 C11 C12 121.6 120.1
C10 C11 H111 120.7 120.0
C12 C11 H111 117.7 119.9
C11 C12 C13 117.4 120.1
C11 C12 H121 119.8 120.0
C13 C12 H121 122.8 119.9
C12 C13 C14 122.4 120.1
C12 C13 H131 118.4 120.0
C14 C13 H131 119.2 119.9
C13 C14 H141 122.5 120.1

Torsion Angles for SHH

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O2 C1 N1 O1 42.0 0.0
C1 N1 O1 HN1 180.0 179.9
O1 N1 C1 C2 230.4 180.0
HO1 O1 N1 C1 179.9 179.9
HO1 O1 N1 HN1 360.0 360.0
O1 N1 C1 O2 42.0 0.0
O2 C1 N1 HN1 222.0 179.9
N1 C1 O2 C2 188.8 180.0
O2 C1 C2 C3 73.6 360.0
O2 C1 C2 H21 198.9 120.0
O2 C1 C2 H22 308.4 240.0
C1 N1 O1 HO1 179.9 179.9
O1 N1 C1 HN1 180.0 180.1
O2 C1 N1 C2 171.6 180.0
N1 C1 C2 C3 245.1 180.0
N1 C1 C2 H21 10.4 300.0
N1 C1 C2 H22 119.8 60.1
HN1 N1 O1 HO1 360.0 360.0
O1 N1 HN1 C1 180.0 179.9
HN1 N1 C1 C2 50.4 359.9
O2 C1 C2 N1 188.5 180.0
C2 C1 N1 HN1 50.4 359.9
C3 C2 C1 H21 234.7 240.0
C3 C2 C1 H22 125.3 119.9
C1 C2 C3 C4 178.2 180.0
C1 C2 C3 H31 303.4 300.1
C1 C2 C3 H32 53.0 60.0
H21 C2 C1 H22 250.5 240.0
C1 C2 C3 H21 125.3 120.1
C1 C2 C3 H22 234.7 240.0
H21 C2 C3 H22 109.4 119.9
C4 C3 C2 H31 234.8 239.9
C4 C3 C2 H32 125.2 119.9
C2 C3 C4 C5 91.7 180.0
C2 C3 C4 H41 216.9 300.1
C2 C3 C4 H42 326.4 60.0
H31 C3 C2 H32 250.4 240.0
C1 C2 H21 C3 232.5 240.0
C1 C2 H21 H22 116.3 120.1
C3 C2 H21 H22 243.8 240.1
H21 C2 C3 C4 52.9 59.9
H21 C2 C3 H31 178.1 180.0
H21 C2 C3 H32 287.7 300.0
C1 C2 H22 C3 127.5 120.0
C1 C2 H22 H21 243.7 240.0
C3 C2 H22 H21 116.2 120.0
H22 C2 C3 C4 303.5 300.0
H22 C2 C3 H31 68.7 60.1
H22 C2 C3 H32 178.3 180.0
C4 C3 C2 H21 52.9 59.9
C4 C3 C2 H22 303.5 300.0
C2 C3 C4 H31 125.2 120.1
C2 C3 C4 H32 234.7 240.0
H31 C3 C4 H32 109.5 119.9
C5 C4 C3 H41 234.8 239.9
C5 C4 C3 H42 125.3 120.0
C3 C4 C5 C6 153.9 180.0
C3 C4 C5 H51 279.1 300.1
C3 C4 C5 H52 28.7 60.0
H41 C4 C3 H42 250.5 240.1
H31 C3 C2 H21 178.1 180.0
H31 C3 C2 H22 68.7 60.1
C2 C3 H31 C4 235.0 239.9
C2 C3 H31 H32 117.5 120.0
C4 C3 H31 H32 242.5 240.1
H31 C3 C4 C5 326.4 59.9
H31 C3 C4 H41 91.7 180.0
H31 C3 C4 H42 201.2 299.9
H32 C3 C2 H21 287.7 300.0
H32 C3 C2 H22 178.3 180.0
C2 C3 H32 C4 125.0 120.0
C2 C3 H32 H31 242.5 240.0
C4 C3 H32 H31 117.5 120.0
H32 C3 C4 C5 216.9 300.0
H32 C3 C4 H41 342.2 60.1
H32 C3 C4 H42 91.7 180.0
C5 C4 C3 H31 326.4 59.9
C5 C4 C3 H32 216.9 300.0
C3 C4 C5 H41 125.3 120.1
C3 C4 C5 H42 234.7 240.1
H41 C4 C5 H42 109.4 120.0
C6 C5 C4 H51 234.8 239.9
C6 C5 C4 H52 125.2 120.0
C4 C5 C6 C7 156.9 180.0
C4 C5 C6 H61 282.2 300.1
C4 C5 C6 H62 31.6 60.1
H51 C5 C4 H52 250.5 240.1
H41 C4 C3 H31 91.7 180.0
H41 C4 C3 H32 342.2 60.1
C3 C4 H41 C5 236.3 239.9
C3 C4 H41 H42 118.2 119.9
C5 C4 H41 H42 241.9 240.0
H41 C4 C5 C6 28.6 59.9
H41 C4 C5 H51 153.8 180.0
H41 C4 C5 H52 263.4 300.0
H42 C4 C3 H31 201.2 299.9
H42 C4 C3 H32 91.7 180.0
C3 C4 H42 C5 123.7 120.0
C3 C4 H42 H41 241.8 240.1
C5 C4 H42 H41 118.1 120.0
H42 C4 C5 C6 279.2 299.9
H42 C4 C5 H51 44.4 60.0
H42 C4 C5 H52 154.0 180.0
C6 C5 C4 H41 28.6 59.9
C6 C5 C4 H42 279.2 299.9
C4 C5 C6 H51 125.2 120.1
C4 C5 C6 H52 234.7 240.1
H51 C5 C6 H52 109.5 120.0
C7 C6 C5 H61 234.7 239.9
C7 C6 C5 H62 125.3 119.9
C5 C6 C7 C8 110.7 180.0
C5 C6 C7 H71 236.0 300.1
C5 C6 C7 H72 345.4 60.1
H61 C6 C5 H62 250.5 240.0
H51 C5 C4 H41 153.8 180.0
H51 C5 C4 H42 44.4 60.0
C4 C5 H51 C6 240.1 239.9
C4 C5 H51 H52 120.1 119.9
C6 C5 H51 H52 240.0 240.0
H51 C5 C6 C7 31.7 59.9
H51 C5 C6 H61 156.9 180.0
H51 C5 C6 H62 266.4 300.0
H52 C5 C4 H41 263.4 300.0
H52 C5 C4 H42 154.0 180.0
C4 C5 H52 C6 120.0 120.0
C4 C5 H52 H51 240.0 240.0
C6 C5 H52 H51 120.0 120.1
H52 C5 C6 C7 282.2 299.9
H52 C5 C6 H61 47.4 60.0
H52 C5 C6 H62 156.9 180.0
C7 C6 C5 H51 31.7 59.9
C7 C6 C5 H52 282.2 299.9
C5 C6 C7 H61 125.3 120.1
C5 C6 C7 H62 234.7 240.0
H61 C6 C7 H62 109.4 119.9
C8 C7 C6 H71 234.7 239.9
C8 C7 C6 H72 125.3 119.9
C6 C7 C8 O3 58.4 0.1
C6 C7 C8 N2 237.0 179.9
H71 C7 C6 H72 250.6 240.0
H61 C6 C5 H51 156.9 180.0
H61 C6 C5 H52 47.4 60.0
C5 C6 H61 C7 234.9 239.9
C5 C6 H61 H62 117.5 120.0
C7 C6 H61 H62 242.6 240.1
H61 C6 C7 C8 345.4 59.9
H61 C6 C7 H71 110.7 179.9
H61 C6 C7 H72 220.1 299.9
H62 C6 C5 H51 266.4 300.0
H62 C6 C5 H52 156.9 180.0
C5 C6 H62 C7 125.1 120.0
C5 C6 H62 H61 242.5 239.9
C7 C6 H62 H61 117.4 120.0
H62 C6 C7 C8 236.0 300.0
H62 C6 C7 H71 1.2 60.0
H62 C6 C7 H72 110.7 180.0
C8 C7 C6 H61 345.4 59.9
C8 C7 C6 H62 236.0 300.0
C6 C7 C8 H71 125.2 120.1
C6 C7 C8 H72 234.7 240.0
H71 C7 C8 H72 109.5 120.0
O3 C8 C7 N2 181.4 180.1
C7 C8 N2 C9 165.6 174.5
C7 C8 N2 HN2 345.6 354.7
H71 C7 C6 H61 110.7 179.9
H71 C7 C6 H62 1.2 60.0
C6 C7 H71 C8 236.1 239.9
C6 C7 H71 H72 118.0 120.0
C8 C7 H71 H72 241.9 240.1
H71 C7 C8 O3 293.2 240.0
H71 C7 C8 N2 111.8 59.9
H72 C7 C6 H61 220.1 299.9
H72 C7 C6 H62 110.7 180.0
C6 C7 H72 C8 124.0 120.0
C6 C7 H72 H71 242.0 240.0
C8 C7 H72 H71 118.0 120.0
H72 C7 C8 O3 183.7 120.0
H72 C7 C8 N2 2.3 299.9
O3 C8 C7 H71 293.2 240.0
O3 C8 C7 H72 183.7 120.0
C7 C8 O3 N2 178.4 179.9
O3 C8 N2 C9 344.2 354.4
O3 C8 N2 HN2 164.2 174.5
N2 C8 C7 H71 111.8 59.9
N2 C8 C7 H72 2.3 299.9
C7 C8 N2 O3 181.4 180.1
C9 N2 C8 HN2 180.0 179.9
C8 N2 C9 C10 178.7 326.8
C8 N2 C9 C14 359.8 146.5
C8 N2 C9 HN2 180.0 180.1
C10 C9 N2 C14 178.9 180.2
N2 C9 C10 C11 180.4 180.0
N2 C9 C10 H101 0.3 360.0
N2 C9 C14 C13 178.6 179.7
N2 C9 C14 H141 358.6 0.3
C8 N2 HN2 C9 180.0 179.9
HN2 N2 C9 C10 358.7 146.6
HN2 N2 C9 C14 179.8 326.4
C10 C9 N2 HN2 358.7 146.6
N2 C9 C10 C14 181.1 179.8
C10 C9 C14 C13 359.8 359.5
C10 C9 C14 H141 179.8 180.1
C11 C10 C9 H101 180.1 180.0
C9 C10 C11 C12 0.9 0.1
C9 C10 C11 H111 180.8 180.0
C14 C9 N2 HN2 179.8 326.4
N2 C9 C14 C10 178.8 180.2
C14 C9 C10 C11 359.2 0.2
C14 C9 C10 H101 179.2 180.2
C12 C13 C14 C9 1.2 0.5
C9 C14 C13 H131 181.2 180.3
C13 C14 C9 H141 179.9 179.4
C11 C10 C9 C14 359.2 0.2
C9 C10 C11 H101 179.9 180.0
C12 C11 C10 H111 180.1 180.1
C10 C11 C12 C13 0.0 359.9
C10 C11 C12 H121 180.0 180.0
H101 C10 C9 C14 179.2 180.2
C9 C10 H101 C11 180.1 180.0
H101 C10 C11 C12 180.9 180.1
H101 C10 C11 H111 0.9 360.0
C12 C11 C10 H101 180.9 180.1
C10 C11 C12 H111 179.9 179.9
C13 C12 C11 H121 180.0 179.9
C11 C12 C13 C14 358.9 359.8
C11 C12 C13 H131 178.9 180.1
H111 C11 C10 H101 0.9 360.0
C10 C11 H111 C12 180.1 180.1
H111 C11 C12 C13 180.1 180.0
H111 C11 C12 H121 0.1 0.1
C9 C14 C13 C12 1.2 0.5
C13 C12 C11 H111 180.1 180.0
C11 C12 C13 H121 180.0 180.1
C14 C13 C12 H131 180.0 179.7
C12 C13 C14 H141 181.1 180.0
H121 C12 C11 H111 0.1 0.1
C11 C12 H121 C13 180.0 179.9
H121 C12 C13 C14 178.9 179.7
H121 C12 C13 H131 358.9 359.9
C9 C14 C13 H141 180.1 180.6
C14 C13 C12 H121 178.9 179.7
C12 C13 C14 H131 180.0 180.3
H131 C13 C12 H121 358.9 359.9
C12 C13 H131 C14 180.0 179.7
H131 C13 C14 H141 1.2 359.7
C9 C14 H141 C13 179.9 179.4
H141 C14 C13 H131 1.2 359.7