PDB Chemical Component SHG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SHG
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.507 |
1.531 |
C1 |
O1 |
1.440 |
1.429 |
C1 |
O5 |
1.427 |
1.429 |
C1 |
H1 |
1.100 |
1.090 |
C2 |
C3 |
1.509 |
1.532 |
C2 |
F2 |
1.420 |
1.399 |
C2 |
H2 |
1.101 |
1.090 |
C3 |
C4 |
1.523 |
1.532 |
C3 |
O3 |
1.437 |
1.428 |
C3 |
H3 |
1.100 |
1.090 |
C4 |
C5 |
1.524 |
1.531 |
C4 |
O4 |
1.437 |
1.428 |
C4 |
H4 |
1.100 |
1.090 |
C5 |
C6 |
1.514 |
1.530 |
C5 |
O5 |
1.451 |
1.429 |
C5 |
H5 |
1.100 |
1.090 |
C6 |
O6 |
1.441 |
1.428 |
C6 |
H61 |
1.100 |
1.090 |
C6 |
H62 |
1.101 |
1.091 |
O3 |
HO3 |
0.950 |
0.967 |
O4 |
HO4 |
0.950 |
0.967 |
O6 |
HO6 |
0.950 |
0.967 |
O1 |
HO1 |
0.950 |
0.967 |
Bond Angles for SHG
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
112.4 |
109.5 |
C2 |
C1 |
O5 |
107.8 |
109.4 |
C2 |
C1 |
H1 |
109.2 |
109.5 |
C1 |
C2 |
C3 |
109.7 |
109.2 |
C1 |
C2 |
F2 |
108.5 |
109.5 |
C1 |
C2 |
H2 |
109.6 |
109.5 |
O1 |
C1 |
O5 |
106.9 |
109.5 |
O1 |
C1 |
H1 |
110.1 |
109.5 |
C1 |
O1 |
HO1 |
109.5 |
114.0 |
O5 |
C1 |
H1 |
110.3 |
109.5 |
C1 |
O5 |
C5 |
114.3 |
114.1 |
C3 |
C2 |
F2 |
108.6 |
109.5 |
C3 |
C2 |
H2 |
109.6 |
109.5 |
C2 |
C3 |
C4 |
110.2 |
109.0 |
C2 |
C3 |
O3 |
107.4 |
109.5 |
C2 |
C3 |
H3 |
109.5 |
109.5 |
F2 |
C2 |
H2 |
110.9 |
109.6 |
C4 |
C3 |
O3 |
110.1 |
109.6 |
C4 |
C3 |
H3 |
109.3 |
109.6 |
C3 |
C4 |
C5 |
108.7 |
109.1 |
C3 |
C4 |
O4 |
107.0 |
109.5 |
C3 |
C4 |
H4 |
111.3 |
109.5 |
O3 |
C3 |
H3 |
110.5 |
109.6 |
C3 |
O3 |
HO3 |
109.5 |
114.0 |
C5 |
C4 |
O4 |
105.5 |
109.6 |
C5 |
C4 |
H4 |
111.3 |
109.5 |
C4 |
C5 |
C6 |
114.5 |
109.5 |
C4 |
C5 |
O5 |
104.9 |
109.4 |
C4 |
C5 |
H5 |
109.2 |
109.5 |
O4 |
C4 |
H4 |
112.7 |
109.6 |
C4 |
O4 |
HO4 |
109.5 |
114.1 |
C6 |
C5 |
O5 |
108.6 |
109.5 |
C6 |
C5 |
H5 |
109.3 |
109.5 |
C5 |
C6 |
O6 |
108.9 |
109.5 |
C5 |
C6 |
H61 |
109.6 |
109.5 |
C5 |
C6 |
H62 |
109.6 |
109.5 |
O5 |
C5 |
H5 |
110.2 |
109.5 |
O6 |
C6 |
H61 |
109.6 |
109.5 |
O6 |
C6 |
H62 |
109.6 |
109.5 |
C6 |
O6 |
HO6 |
109.5 |
114.0 |
H61 |
C6 |
H62 |
109.5 |
109.4 |
Torsion Angles for SHG
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O5 |
117.6 |
120.0 |
O1 |
C1 |
C2 |
H1 |
237.5 |
240.0 |
C2 |
C1 |
O1 |
HO1 |
180.0 |
180.0 |
O5 |
C1 |
C2 |
H1 |
119.9 |
120.0 |
C2 |
C1 |
O5 |
C5 |
295.1 |
298.8 |
C3 |
C2 |
C1 |
F2 |
241.5 |
240.1 |
C3 |
C2 |
C1 |
H2 |
120.3 |
119.9 |
C1 |
C2 |
C3 |
C4 |
304.3 |
303.0 |
C1 |
C2 |
C3 |
O3 |
184.4 |
183.2 |
C1 |
C2 |
C3 |
H3 |
64.4 |
62.9 |
F2 |
C2 |
C1 |
H2 |
238.8 |
239.8 |
C2 |
C1 |
O1 |
O5 |
241.9 |
240.1 |
C2 |
C1 |
O1 |
H1 |
122.0 |
120.0 |
O1 |
C1 |
C2 |
C3 |
173.9 |
177.6 |
O1 |
C1 |
C2 |
F2 |
292.4 |
297.5 |
O1 |
C1 |
C2 |
H2 |
53.6 |
57.7 |
O5 |
C1 |
O1 |
H1 |
240.1 |
240.0 |
O1 |
C1 |
O5 |
C5 |
174.1 |
178.8 |
C2 |
C1 |
O5 |
O1 |
121.1 |
120.0 |
C2 |
C1 |
O5 |
H1 |
240.8 |
240.0 |
O5 |
C1 |
C2 |
C3 |
56.3 |
57.6 |
O5 |
C1 |
C2 |
F2 |
174.8 |
177.5 |
O5 |
C1 |
C2 |
H2 |
296.0 |
297.7 |
O1 |
C1 |
O5 |
H1 |
119.8 |
120.0 |
O5 |
C1 |
O1 |
HO1 |
298.1 |
300.0 |
C4 |
C5 |
O5 |
C1 |
66.6 |
61.2 |
C6 |
C5 |
O5 |
C1 |
189.5 |
181.2 |
C1 |
O5 |
C5 |
H5 |
309.2 |
301.2 |
C2 |
C1 |
H1 |
O1 |
236.1 |
240.0 |
C2 |
C1 |
H1 |
O5 |
118.3 |
120.0 |
H1 |
C1 |
C2 |
C3 |
296.4 |
297.6 |
H1 |
C1 |
C2 |
F2 |
54.9 |
57.5 |
H1 |
C1 |
C2 |
H2 |
176.1 |
177.7 |
O1 |
C1 |
H1 |
O5 |
242.2 |
240.0 |
H1 |
C1 |
O1 |
HO1 |
58.0 |
60.0 |
H1 |
C1 |
O5 |
C5 |
54.3 |
58.8 |
C3 |
C2 |
C1 |
O1 |
173.9 |
177.6 |
C3 |
C2 |
C1 |
O5 |
56.3 |
57.6 |
C3 |
C2 |
C1 |
H1 |
296.4 |
297.6 |
C1 |
C2 |
C3 |
F2 |
118.4 |
119.9 |
C1 |
C2 |
C3 |
H2 |
239.7 |
240.1 |
F2 |
C2 |
C3 |
H2 |
121.2 |
120.2 |
C4 |
C3 |
C2 |
O3 |
119.9 |
119.9 |
C4 |
C3 |
C2 |
H3 |
239.8 |
240.1 |
C2 |
C3 |
C4 |
C5 |
58.6 |
57.0 |
C2 |
C3 |
C4 |
O4 |
172.1 |
176.9 |
C2 |
C3 |
C4 |
H4 |
295.6 |
297.1 |
O3 |
C3 |
C2 |
H3 |
119.9 |
120.3 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
299.9 |
F2 |
C2 |
C1 |
O1 |
292.4 |
297.5 |
F2 |
C2 |
C1 |
O5 |
174.8 |
177.5 |
F2 |
C2 |
C1 |
H1 |
54.9 |
57.5 |
C1 |
C2 |
F2 |
C3 |
240.8 |
240.3 |
C1 |
C2 |
F2 |
H2 |
120.4 |
120.1 |
C3 |
C2 |
F2 |
H2 |
239.6 |
239.8 |
F2 |
C2 |
C3 |
C4 |
185.8 |
183.1 |
F2 |
C2 |
C3 |
O3 |
65.9 |
63.3 |
F2 |
C2 |
C3 |
H3 |
306.0 |
303.0 |
H2 |
C2 |
C1 |
O1 |
53.6 |
57.7 |
H2 |
C2 |
C1 |
O5 |
296.0 |
297.7 |
H2 |
C2 |
C1 |
H1 |
176.1 |
177.7 |
C1 |
C2 |
H2 |
C3 |
120.4 |
119.7 |
C1 |
C2 |
H2 |
F2 |
240.3 |
239.9 |
C3 |
C2 |
H2 |
F2 |
119.8 |
120.2 |
H2 |
C2 |
C3 |
C4 |
64.6 |
62.9 |
H2 |
C2 |
C3 |
O3 |
304.7 |
303.0 |
H2 |
C2 |
C3 |
H3 |
184.8 |
182.8 |
C4 |
C3 |
C2 |
F2 |
185.8 |
183.1 |
C4 |
C3 |
C2 |
H2 |
64.6 |
62.9 |
C2 |
C3 |
C4 |
O3 |
241.8 |
240.2 |
C2 |
C3 |
C4 |
H3 |
120.3 |
119.9 |
O3 |
C3 |
C4 |
H3 |
238.5 |
239.7 |
C4 |
C3 |
O3 |
HO3 |
60.1 |
180.4 |
C5 |
C4 |
C3 |
O4 |
246.5 |
240.1 |
C5 |
C4 |
C3 |
H4 |
123.0 |
119.9 |
C3 |
C4 |
C5 |
C6 |
180.6 |
182.4 |
C3 |
C4 |
C5 |
O5 |
299.5 |
302.4 |
C3 |
C4 |
C5 |
H5 |
57.6 |
62.4 |
O4 |
C4 |
C3 |
H4 |
236.5 |
239.8 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
60.1 |
O3 |
C3 |
C2 |
F2 |
65.9 |
63.3 |
O3 |
C3 |
C2 |
H2 |
304.7 |
303.0 |
C2 |
C3 |
O3 |
C4 |
119.9 |
119.5 |
C2 |
C3 |
O3 |
H3 |
240.7 |
239.8 |
C4 |
C3 |
O3 |
H3 |
120.8 |
120.3 |
O3 |
C3 |
C4 |
C5 |
176.8 |
176.8 |
O3 |
C3 |
C4 |
O4 |
290.3 |
296.7 |
O3 |
C3 |
C4 |
H4 |
53.8 |
56.9 |
H3 |
C3 |
C2 |
F2 |
306.0 |
303.0 |
H3 |
C3 |
C2 |
H2 |
184.8 |
182.8 |
C2 |
C3 |
H3 |
C4 |
239.3 |
240.4 |
C2 |
C3 |
H3 |
O3 |
118.0 |
120.2 |
C4 |
C3 |
H3 |
O3 |
238.8 |
239.7 |
H3 |
C3 |
C4 |
C5 |
298.3 |
297.1 |
H3 |
C3 |
C4 |
O4 |
51.8 |
57.0 |
H3 |
C3 |
C4 |
H4 |
175.3 |
177.2 |
H3 |
C3 |
O3 |
HO3 |
299.3 |
60.1 |
C1 |
O5 |
C5 |
C4 |
66.6 |
61.2 |
C5 |
C4 |
C3 |
O3 |
176.8 |
176.8 |
C5 |
C4 |
C3 |
H3 |
298.3 |
297.1 |
C3 |
C4 |
C5 |
O4 |
114.5 |
119.9 |
C3 |
C4 |
C5 |
H4 |
237.0 |
240.2 |
O4 |
C4 |
C5 |
H4 |
122.5 |
120.3 |
C5 |
C4 |
O4 |
HO4 |
295.7 |
179.7 |
C6 |
C5 |
C4 |
O5 |
241.1 |
240.0 |
C6 |
C5 |
C4 |
H5 |
123.0 |
120.0 |
C4 |
C5 |
C6 |
O6 |
67.1 |
185.0 |
C4 |
C5 |
C6 |
H61 |
187.1 |
305.1 |
C4 |
C5 |
C6 |
H62 |
307.2 |
65.0 |
O5 |
C5 |
C4 |
H5 |
241.9 |
240.0 |
O4 |
C4 |
C3 |
O3 |
290.3 |
296.7 |
O4 |
C4 |
C3 |
H3 |
51.8 |
57.0 |
C3 |
C4 |
O4 |
C5 |
244.3 |
240.3 |
C3 |
C4 |
O4 |
H4 |
122.7 |
120.1 |
C5 |
C4 |
O4 |
H4 |
238.3 |
239.8 |
O4 |
C4 |
C5 |
C6 |
66.2 |
62.5 |
O4 |
C4 |
C5 |
O5 |
185.1 |
182.5 |
O4 |
C4 |
C5 |
H5 |
303.2 |
302.5 |
H4 |
C4 |
C3 |
O3 |
53.8 |
56.9 |
H4 |
C4 |
C3 |
H3 |
175.3 |
177.2 |
C3 |
C4 |
H4 |
C5 |
121.5 |
119.6 |
C3 |
C4 |
H4 |
O4 |
239.8 |
239.9 |
C5 |
C4 |
H4 |
O4 |
118.3 |
120.2 |
H4 |
C4 |
C5 |
C6 |
303.6 |
302.2 |
H4 |
C4 |
C5 |
O5 |
62.5 |
62.2 |
H4 |
C4 |
C5 |
H5 |
180.6 |
182.2 |
H4 |
C4 |
O4 |
HO4 |
57.4 |
300.0 |
C1 |
O5 |
C5 |
C6 |
189.5 |
181.2 |
C6 |
C5 |
C4 |
O4 |
66.2 |
62.5 |
C6 |
C5 |
C4 |
H4 |
303.6 |
302.2 |
C4 |
C5 |
C6 |
O5 |
116.8 |
120.0 |
C4 |
C5 |
C6 |
H5 |
237.1 |
240.0 |
O5 |
C5 |
C6 |
H5 |
120.3 |
120.0 |
O6 |
C6 |
C5 |
H61 |
240.1 |
240.0 |
O6 |
C6 |
C5 |
H62 |
119.9 |
120.0 |
C5 |
C6 |
O6 |
HO6 |
180.0 |
180.0 |
H61 |
C6 |
C5 |
H62 |
239.9 |
240.1 |
C5 |
O5 |
C1 |
H1 |
54.3 |
58.8 |
O5 |
C5 |
C4 |
O4 |
185.1 |
182.5 |
O5 |
C5 |
C4 |
H4 |
62.5 |
62.2 |
C4 |
C5 |
O5 |
C6 |
237.2 |
240.0 |
C4 |
C5 |
O5 |
H5 |
117.4 |
120.0 |
C6 |
C5 |
O5 |
H5 |
240.3 |
240.0 |
O5 |
C5 |
C6 |
O6 |
310.3 |
65.1 |
O5 |
C5 |
C6 |
H61 |
70.3 |
185.1 |
O5 |
C5 |
C6 |
H62 |
190.4 |
305.0 |
H5 |
C5 |
C4 |
O4 |
303.2 |
302.5 |
H5 |
C5 |
C4 |
H4 |
180.6 |
182.2 |
C4 |
C5 |
H5 |
C6 |
126.0 |
120.0 |
C4 |
C5 |
H5 |
O5 |
245.3 |
240.0 |
C6 |
C5 |
H5 |
O5 |
119.3 |
120.0 |
H5 |
C5 |
C6 |
O6 |
190.0 |
305.0 |
H5 |
C5 |
C6 |
H61 |
310.0 |
65.1 |
H5 |
C5 |
C6 |
H62 |
70.1 |
185.0 |
O6 |
C6 |
C5 |
O5 |
310.3 |
65.1 |
O6 |
C6 |
C5 |
H5 |
190.0 |
305.0 |
C5 |
C6 |
O6 |
H61 |
119.9 |
120.1 |
C5 |
C6 |
O6 |
H62 |
240.1 |
240.0 |
H61 |
C6 |
O6 |
H62 |
120.2 |
119.9 |
H61 |
C6 |
C5 |
O5 |
70.3 |
185.1 |
H61 |
C6 |
C5 |
H5 |
310.0 |
65.1 |
C5 |
C6 |
H61 |
O6 |
240.5 |
240.0 |
C5 |
C6 |
H61 |
H62 |
120.2 |
120.0 |
O6 |
C6 |
H61 |
H62 |
239.7 |
240.0 |
H61 |
C6 |
O6 |
HO6 |
60.1 |
60.0 |
H62 |
C6 |
C5 |
O5 |
190.4 |
305.0 |
H62 |
C6 |
C5 |
H5 |
70.1 |
185.0 |
C5 |
C6 |
H62 |
O6 |
119.5 |
120.0 |
C5 |
C6 |
H62 |
H61 |
239.8 |
240.0 |
O6 |
C6 |
H62 |
H61 |
120.3 |
120.0 |
H62 |
C6 |
O6 |
HO6 |
299.9 |
300.0 |
HO3 |
O3 |
C3 |
H3 |
299.3 |
60.1 |
HO4 |
O4 |
C4 |
H4 |
57.4 |
300.0 |
HO6 |
O6 |
C6 |
H61 |
60.1 |
60.0 |
HO6 |
O6 |
C6 |
H62 |
299.9 |
300.0 |
HO1 |
O1 |
C1 |
O5 |
298.1 |
300.0 |
HO1 |
O1 |
C1 |
H1 |
58.0 |
60.0 |