PDB Chemical Component SGN

Ideal Model

Chemical Description

Name 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose
Synonyms N,O6-DISULFO-GLUCOSAMINE; 6-O-sulfo-N-sulfo-alpha-D-glucosamine; 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-glucose
Formula C6 H13 N O11 S2
Formal charge 0
Molecular weight 339.298 g/mol
Component type D-saccharide, alpha linking
Nonstandard Parent Id PA1

Chemical features

Atom count 33
Chiral atom count 5
Chiral atoms C1 C2 C3 C4 C5
Observed leaving atoms O1 HO1 HO3 HO4
Bond count 33
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose
Systematic name (OpenEye OEToolkits) [(2S,3R,4R,5S,6R)-2,4,5-trihydroxy-6-(sulfooxymethyl)oxan-3-yl]sulfamic acid

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1O[C@H](CO[S](O)(=O)=O)[C@@H](O)[C@H](O)[C@H]1N[S](O)(=O)=O
SMILES (CACTVS) O[CH]1O[CH](CO[S](O)(=O)=O)[CH](O)[CH](O)[CH]1N[S](O)(=O)=O
Stereo SMILES (OpenEye) C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)NS(=O)(=O)O)O)O)OS(=O)(=O)O
InChI descriptor InChI=1S/C6H13NO11S2/c8-4-2(1-17-20(14,15)16)18-6(10)3(5(4)9)7-19(11,12)13/h2-10H,1H2,(H,11,12,13)(H,14,15,16)/t2-,3-,4-,5-,6+/m1/s1
InChIKey descriptor DQTRACMFIGDHSN-UKFBFLRUSA-N

Status Information

Last modified 2020-07-17
Created 1999-07-08
Release status REL
Model PDB code 1BFB
Processing site EBI