PDB Chemical Component SGB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SGB

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N	CA	1.492	1.443
CA	C	1.555	1.515
C	O	1.230	1.224
CA	CB	1.535	1.521
CB	OG	1.412	1.416
OG	P1	1.582	1.619
O1	P1	1.580	1.502
P1	C1	1.792	1.782
P1	O2	1.609	1.619
O2	C2	1.453	1.416
C2	C4	1.530	1.521
C2	C3	1.534	1.521
C	OXT	1.327	1.359
N	HN1	1.020	1.005
N	HN2	1.020	1.005
CA	HA	1.115	1.095
CB	HBC1	1.115	1.095
CB	HBC2	1.115	1.096
OXT	HOT	0.949	0.981
C1	H1C1	1.115	1.093
C1	H1C2	1.115	1.093
C1	H1C3	1.115	1.093
C2	H2	1.115	1.095
C4	H4C1	1.115	1.094
C4	H4C2	1.115	1.096
C4	H4C3	1.115	1.096
C3	H3C1	1.115	1.094
C3	H3C2	1.115	1.095
C3	H3C3	1.115	1.095

Bond Angles for SGB

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N	CA	C	114.3	107.3
N	CA	CB	110.5	111.7
CA	N	HN1	110.5	119.0
CA	N	HN2	114.3	118.9
N	CA	HA	106.3	105.4
CA	C	O	120.9	125.2
C	CA	CB	112.2	110.5
CA	C	OXT	117.1	111.9
C	CA	HA	104.3	110.0
O	C	OXT	122.0	122.9
CA	CB	OG	110.5	109.2
CB	CA	HA	108.7	111.8
CA	CB	HBC1	111.8	111.1
CA	CB	HBC2	111.8	111.6
CB	OG	P1	121.9	120.9
OG	CB	HBC1	111.8	107.8
OG	CB	HBC2	111.8	108.6
OG	P1	O1	112.4	113.7
OG	P1	C1	94.7	105.5
OG	P1	O2	107.2	102.7
O1	P1	C1	115.4	113.8
O1	P1	O2	112.5	114.7
C1	P1	O2	113.1	105.3
P1	C1	H1C1	118.0	110.1
P1	C1	H1C2	118.0	110.1
P1	C1	H1C3	94.7	110.1
P1	O2	C2	124.5	119.1
O2	C2	C4	115.1	109.3
O2	C2	C3	109.9	109.2
O2	C2	H2	104.7	107.4
C4	C2	C3	107.9	111.9
C4	C2	H2	106.9	109.5
C2	C4	H4C1	110.2	111.3
C2	C4	H4C2	110.2	110.3
C2	C4	H4C3	115.1	111.1
C3	C2	H2	112.4	109.5
C2	C3	H3C1	112.0	111.3
C2	C3	H3C2	112.0	110.4
C2	C3	H3C3	109.9	111.1
C	OXT	HOT	117.1	115.2
HN1	N	HN2	110.5	120.8
HBC1	CB	HBC2	98.6	108.4
H1C1	C1	H1C2	92.3	108.8
H1C1	C1	H1C3	118.0	108.9
H1C2	C1	H1C3	118.0	108.8
H4C1	C4	H4C2	100.1	108.7
H4C1	C4	H4C3	110.2	108.7
H4C2	C4	H4C3	110.2	106.6
H3C1	C3	H3C2	98.4	108.7
H3C1	C3	H3C3	112.0	108.6
H3C2	C3	H3C3	112.0	106.7

Torsion Angles for SGB

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N	CA	C	O	58.1	324.2
C	CA	N	CB	127.8	121.2
N	CA	C	OXT	237.5	146.4
C	CA	N	HA	245.5	242.8
N	CA	CB	OG	206.3	178.2
CB	CA	N	HA	117.7	121.6
N	CA	CB	HBC1	81.1	59.4
N	CA	CB	HBC2	331.6	298.3
HN1	N	CA	HN2	234.7	166.7
N	CA	C	CB	233.1	238.0
C	CA	N	HN1	54.7	329.9
C	CA	N	HN2	180.0	163.2
N	CA	C	HA	115.7	114.1
O	C	CA	OXT	180.6	177.8
C	CA	CB	OG	77.5	58.8
CB	CA	C	HA	242.5	236.1
C	CA	CB	HBC1	312.2	300.0
C	CA	CB	HBC2	202.7	178.9
CA	C	OXT	HOT	180.0	177.8
O	C	CA	CB	185.0	86.2
CA	C	O	OXT	179.3	182.4
O	C	CA	HA	302.5	210.0
O	C	OXT	HOT	359.3	359.9
N	CA	CB	C	128.9	119.4
CB	CA	N	HN1	287.0	208.7
CB	CA	N	HN2	52.3	42.0
N	CA	CB	HA	243.7	242.2
CB	CA	C	O	185.0	86.2
CB	CA	C	OXT	4.3	268.3
C	CA	CB	HA	114.8	122.8
CA	CB	OG	P1	218.4	240.0
OG	CB	CA	HBC1	125.3	118.8
OG	CB	CA	HBC2	234.7	239.9
HBC1	CB	CA	HBC2	109.5	121.1
OG	CB	CA	HA	322.6	296.0
CA	CB	OG	HBC1	234.8	239.2
CA	CB	OG	HBC2	125.3	121.9
CB	OG	P1	O1	32.9	174.6
CB	OG	P1	C1	152.8	300.0
CB	OG	P1	O2	268.8	50.0
HBC1	CB	OG	HBC2	250.5	242.7
P1	OG	CB	HBC1	343.6	0.8
P1	OG	CB	HBC2	93.1	118.1
O1	P1	OG	C1	240.1	234.6
O1	P1	OG	O2	124.1	124.6
C1	P1	OG	O2	244.0	250.0
OG	P1	C1	H1C1	54.8	3.0
OG	P1	C1	H1C2	305.3	122.9
OG	P1	C1	H1C3	180.0	242.9
OG	P1	O2	C2	158.5	189.8
OG	P1	O1	C1	107.0	120.9
OG	P1	O1	O2	238.8	242.2
C1	P1	O1	O2	131.8	121.3
O1	P1	C1	H1C1	172.3	128.3
O1	P1	C1	H1C2	62.8	248.3
O1	P1	C1	H1C3	297.5	8.3
O1	P1	O2	C2	34.5	65.9
OG	P1	C1	O1	242.5	234.6
OG	P1	C1	O2	111.0	108.2
O1	P1	C1	O2	228.5	233.5
C1	P1	O2	C2	261.5	300.0
H1C1	C1	P1	H1C2	109.5	240.0
H1C1	C1	P1	H1C3	234.7	120.0
H1C2	C1	P1	H1C3	125.3	240.0
OG	P1	O2	O1	124.1	123.9
OG	P1	O2	C1	257.0	249.8
O1	P1	O2	C1	132.9	125.9
O2	P1	C1	H1C1	303.8	254.8
O2	P1	C1	H1C2	194.3	14.8
O2	P1	C1	H1C3	69.0	134.8
P1	O2	C2	C4	41.8	180.0
P1	O2	C2	C3	163.8	302.7
P1	O2	C2	H2	284.8	61.3
C4	C2	O2	C3	238.0	237.3
C4	C2	O2	H2	117.1	118.7
O2	C2	C4	H4C1	54.7	181.7
O2	C2	C4	H4C2	305.3	302.4
O2	C2	C4	H4C3	180.0	60.4
C3	C2	O2	H2	239.0	241.4
O2	C2	C3	H3C1	54.7	178.4
O2	C2	C3	H3C2	305.2	57.7
O2	C2	C3	H3C3	180.0	299.6
O2	C2	C4	C3	123.1	121.1
O2	C2	C4	H2	244.2	242.6
C3	C2	C4	H2	121.1	121.5
C4	C2	C3	H3C1	180.9	299.5
C4	C2	C3	H3C2	71.4	178.8
C4	C2	C3	H3C3	306.2	60.7
H4C1	C4	C2	H4C2	109.5	239.3
H4C1	C4	C2	H4C3	234.7	121.3
H4C2	C4	C2	H4C3	125.3	241.9
O2	C2	C3	C4	233.8	238.9
O2	C2	C3	H2	116.2	117.3
C4	C2	C3	H2	242.4	238.4
C3	C2	C4	H4C1	291.6	60.6
C3	C2	C4	H4C2	182.2	181.3
C3	C2	C4	H4C3	56.9	299.3
H3C1	C3	C2	H3C2	109.5	120.7
H3C1	C3	C2	H3C3	234.7	238.8
H3C2	C3	C2	H3C3	125.3	118.1
CA	C	OXT	O	180.6	177.9
OXT	C	CA	CB	4.3	268.3
OXT	C	CA	HA	121.8	32.2
HN1	N	CA	C	54.7	329.9
HN1	N	CA	CB	287.0	208.7
CA	N	HN1	HN2	127.4	193.6
HN1	N	CA	HA	169.2	87.1
HN2	N	CA	C	180.0	163.2
HN2	N	CA	CB	52.3	42.0
CA	N	HN2	HN1	234.7	166.4
HN2	N	CA	HA	294.5	280.4
N	CA	HA	C	238.8	244.6
N	CA	HA	CB	119.0	121.5
HA	CA	N	HN1	169.2	87.1
HA	CA	N	HN2	294.5	280.4
HA	CA	C	O	302.5	210.0
C	CA	HA	CB	240.1	236.9
HA	CA	C	OXT	121.8	32.2
HA	CA	CB	OG	322.6	296.0
HA	CA	CB	HBC1	197.4	177.2
HA	CA	CB	HBC2	87.9	56.1
CA	CB	HBC1	OG	124.5	119.6
HBC1	CB	CA	HA	197.4	177.2
CA	CB	HBC1	HBC2	242.3	237.1
HBC1	CB	OG	P1	343.6	0.8
OG	CB	HBC1	HBC2	117.7	117.4
CA	CB	HBC2	OG	235.4	239.6
HBC2	CB	CA	HA	87.9	56.1
CA	CB	HBC2	HBC1	117.7	122.6
HBC2	CB	OG	P1	93.1	118.1
OG	CB	HBC2	HBC1	242.3	243.1
H1C1	C1	P1	O2	303.8	254.8
P1	C1	H1C1	H1C2	236.4	120.8
P1	C1	H1C1	H1C3	112.8	239.3
H1C2	C1	H1C1	H1C3	236.4	118.5
H1C2	C1	P1	O2	194.3	14.8
P1	C1	H1C2	H1C1	123.6	239.2
P1	C1	H1C2	H1C3	247.2	120.7
H1C1	C1	H1C2	H1C3	123.6	241.5
H1C3	C1	P1	O2	69.0	134.8
P1	C1	H1C3	H1C1	234.7	120.8
P1	C1	H1C3	H1C2	125.2	239.2
H1C1	C1	H1C3	H1C2	250.5	118.4
O2	C2	H2	C4	122.5	118.5
O2	C2	H2	C3	240.7	241.5
C4	C2	H2	C3	118.2	123.0
H2	C2	C4	H4C1	170.5	299.1
H2	C2	C4	H4C2	61.1	59.7
H2	C2	C4	H4C3	295.8	177.8
H2	C2	C3	H3C1	298.5	61.1
H2	C2	C3	H3C2	189.0	300.3
H2	C2	C3	H3C3	63.8	182.2
H4C1	C4	C2	C3	291.6	60.6
H4C1	C4	C2	H2	170.5	299.1
C2	C4	H4C1	H4C2	244.0	121.7
C2	C4	H4C1	H4C3	128.0	237.3
H4C2	C4	H4C1	H4C3	244.0	115.7
H4C2	C4	C2	C3	182.2	181.3
H4C2	C4	C2	H2	61.1	59.7
C2	C4	H4C2	H4C1	116.0	237.7
C2	C4	H4C2	H4C3	232.0	120.8
H4C1	C4	H4C2	H4C3	116.0	243.0
H4C3	C4	C2	C3	56.9	299.3
H4C3	C4	C2	H2	295.8	177.8
C2	C4	H4C3	H4C1	234.7	122.8
C2	C4	H4C3	H4C2	125.2	239.7
H4C1	C4	H4C3	H4C2	250.5	117.0
H3C1	C3	C2	H2	298.5	61.1
C2	C3	H3C1	H3C2	242.0	238.3
C2	C3	H3C1	H3C3	124.1	122.6
H3C2	C3	H3C1	H3C3	242.0	244.3
H3C2	C3	C2	H2	189.0	300.3
C2	C3	H3C2	H3C1	117.9	122.3
C2	C3	H3C2	H3C3	235.9	239.2
H3C1	C3	H3C2	H3C3	118.0	116.9
H3C3	C3	C2	H2	63.8	182.2
C2	C3	H3C3	H3C1	234.7	237.3
C2	C3	H3C3	H3C2	125.3	120.3
H3C1	C3	H3C3	H3C2	250.5	243.0