PDB Chemical Component SG1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SG1
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
S1 |
C2 |
1.787 |
1.761 |
S1 |
N17 |
1.625 |
1.656 |
S1 |
O18 |
1.451 |
1.421 |
S1 |
O19 |
1.434 |
1.421 |
C2 |
C3 |
1.391 |
1.384 |
C2 |
C16 |
1.401 |
1.382 |
C3 |
C4 |
1.400 |
1.381 |
C3 |
H31 |
1.103 |
1.080 |
C4 |
C5 |
1.395 |
1.389 |
C4 |
H41 |
1.103 |
1.080 |
C5 |
N6 |
1.426 |
1.400 |
C5 |
C12 |
1.408 |
1.389 |
N6 |
C7 |
1.336 |
1.344 |
N6 |
C11 |
1.457 |
1.468 |
C7 |
O8 |
1.239 |
1.213 |
C7 |
C9 |
1.508 |
1.513 |
C9 |
C10 |
1.540 |
1.546 |
C9 |
H91 |
1.115 |
1.090 |
C9 |
H92 |
1.115 |
1.089 |
C10 |
C11 |
1.537 |
1.546 |
C10 |
H101 |
1.115 |
1.090 |
C10 |
H102 |
1.115 |
1.090 |
C11 |
H111 |
1.115 |
1.089 |
C11 |
H112 |
1.115 |
1.090 |
C12 |
N13 |
1.363 |
1.480 |
C12 |
C16 |
1.392 |
1.381 |
N13 |
O14 |
1.217 |
1.219 |
N13 |
O15 |
1.218 |
1.218 |
C16 |
H161 |
1.103 |
1.080 |
N17 |
H171 |
1.020 |
0.970 |
N17 |
H172 |
1.020 |
0.970 |
Bond Angles for SG1
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
S1 |
N17 |
102.5 |
107.4 |
C2 |
S1 |
O18 |
107.4 |
105.8 |
C2 |
S1 |
O19 |
109.6 |
105.8 |
S1 |
C2 |
C3 |
121.9 |
119.9 |
S1 |
C2 |
C16 |
118.8 |
120.0 |
N17 |
S1 |
O18 |
109.6 |
105.8 |
N17 |
S1 |
O19 |
107.3 |
105.7 |
S1 |
N17 |
H171 |
114.8 |
120.0 |
S1 |
N17 |
H172 |
102.5 |
120.1 |
O18 |
S1 |
O19 |
119.2 |
125.3 |
C3 |
C2 |
C16 |
119.2 |
120.1 |
C2 |
C3 |
C4 |
119.3 |
120.1 |
C2 |
C3 |
H31 |
120.1 |
119.9 |
C2 |
C16 |
C12 |
121.5 |
120.1 |
C2 |
C16 |
H161 |
119.6 |
120.0 |
C4 |
C3 |
H31 |
120.7 |
120.0 |
C3 |
C4 |
C5 |
121.6 |
119.9 |
C3 |
C4 |
H41 |
119.4 |
120.0 |
C5 |
C4 |
H41 |
119.0 |
120.0 |
C4 |
C5 |
N6 |
118.9 |
120.0 |
C4 |
C5 |
C12 |
118.6 |
119.9 |
N6 |
C5 |
C12 |
122.5 |
120.1 |
C5 |
N6 |
C7 |
124.3 |
124.4 |
C5 |
N6 |
C11 |
121.1 |
124.3 |
C5 |
C12 |
N13 |
123.3 |
120.0 |
C5 |
C12 |
C16 |
118.7 |
119.9 |
C7 |
N6 |
C11 |
114.5 |
111.3 |
N6 |
C7 |
O8 |
127.2 |
124.9 |
N6 |
C7 |
C9 |
110.1 |
110.1 |
N6 |
C11 |
C10 |
104.3 |
105.4 |
N6 |
C11 |
H111 |
114.2 |
110.3 |
N6 |
C11 |
H112 |
114.2 |
110.3 |
O8 |
C7 |
C9 |
122.7 |
125.0 |
C7 |
C9 |
C10 |
104.5 |
104.3 |
C7 |
C9 |
H91 |
114.1 |
110.6 |
C7 |
C9 |
H92 |
114.1 |
110.3 |
C10 |
C9 |
H91 |
114.1 |
110.4 |
C10 |
C9 |
H92 |
114.1 |
110.5 |
C9 |
C10 |
C11 |
106.3 |
101.7 |
C9 |
C10 |
H101 |
113.4 |
111.0 |
C9 |
C10 |
H102 |
113.4 |
111.0 |
H91 |
C9 |
H92 |
96.4 |
110.6 |
C11 |
C10 |
H101 |
113.4 |
110.9 |
C11 |
C10 |
H102 |
113.4 |
110.9 |
C10 |
C11 |
H111 |
114.2 |
110.2 |
C10 |
C11 |
H112 |
114.2 |
110.2 |
H101 |
C10 |
H102 |
97.1 |
110.9 |
H111 |
C11 |
H112 |
96.3 |
110.3 |
N13 |
C12 |
C16 |
118.0 |
120.1 |
C12 |
N13 |
O14 |
117.4 |
120.0 |
C12 |
N13 |
O15 |
118.3 |
120.0 |
C12 |
C16 |
H161 |
118.9 |
119.9 |
O14 |
N13 |
O15 |
124.3 |
120.0 |
H171 |
N17 |
H172 |
114.9 |
120.0 |
Torsion Angles for SG1
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N17 |
S1 |
C2 |
O18 |
115.4 |
112.6 |
N17 |
S1 |
C2 |
O19 |
246.3 |
247.4 |
C2 |
S1 |
N17 |
H171 |
54.7 |
359.9 |
C2 |
S1 |
N17 |
H172 |
180.0 |
179.7 |
O18 |
S1 |
C2 |
O19 |
130.9 |
134.8 |
C3 |
C2 |
S1 |
C16 |
175.7 |
180.3 |
S1 |
C2 |
C3 |
C4 |
183.2 |
180.0 |
S1 |
C2 |
C3 |
H31 |
3.2 |
0.1 |
S1 |
C2 |
C16 |
C12 |
172.4 |
179.7 |
S1 |
C2 |
C16 |
H161 |
352.4 |
0.3 |
C2 |
S1 |
N17 |
O18 |
246.2 |
247.3 |
C2 |
S1 |
N17 |
O19 |
115.4 |
112.6 |
N17 |
S1 |
C2 |
C3 |
331.1 |
90.0 |
N17 |
S1 |
C2 |
C16 |
155.4 |
269.7 |
O18 |
S1 |
N17 |
O19 |
229.2 |
225.3 |
H171 |
N17 |
S1 |
H172 |
234.7 |
180.2 |
C2 |
S1 |
O18 |
N17 |
110.6 |
113.8 |
C2 |
S1 |
O18 |
O19 |
234.7 |
236.8 |
O18 |
S1 |
C2 |
C3 |
215.7 |
337.4 |
O18 |
S1 |
C2 |
C16 |
40.0 |
157.1 |
N17 |
S1 |
O18 |
O19 |
124.1 |
123.0 |
O18 |
S1 |
N17 |
H171 |
168.6 |
112.6 |
O18 |
S1 |
N17 |
H172 |
293.9 |
292.4 |
C2 |
S1 |
O19 |
N17 |
249.4 |
246.3 |
C2 |
S1 |
O19 |
O18 |
124.2 |
123.2 |
O19 |
S1 |
C2 |
C3 |
84.9 |
202.6 |
O19 |
S1 |
C2 |
C16 |
269.2 |
22.3 |
N17 |
S1 |
O19 |
O18 |
234.8 |
236.9 |
O19 |
S1 |
N17 |
H171 |
299.4 |
247.3 |
O19 |
S1 |
N17 |
H172 |
64.7 |
67.1 |
C3 |
C2 |
S1 |
N17 |
331.1 |
90.0 |
C3 |
C2 |
S1 |
O18 |
215.7 |
337.4 |
C3 |
C2 |
S1 |
O19 |
84.9 |
202.6 |
S1 |
C2 |
C3 |
C16 |
184.3 |
179.7 |
C3 |
C2 |
C16 |
C12 |
356.6 |
359.5 |
C3 |
C2 |
C16 |
H161 |
176.6 |
180.0 |
C4 |
C3 |
C2 |
H31 |
180.0 |
179.9 |
C2 |
C3 |
C4 |
C5 |
358.3 |
360.0 |
C2 |
C3 |
C4 |
H41 |
178.3 |
180.0 |
C16 |
C2 |
S1 |
N17 |
155.4 |
269.7 |
C16 |
C2 |
S1 |
O18 |
40.0 |
157.1 |
C16 |
C2 |
S1 |
O19 |
269.2 |
22.3 |
S1 |
C2 |
C16 |
C3 |
175.8 |
180.3 |
C16 |
C2 |
C3 |
C4 |
358.9 |
0.2 |
C16 |
C2 |
C3 |
H31 |
178.9 |
180.3 |
C5 |
C12 |
C16 |
C2 |
10.4 |
0.6 |
N13 |
C12 |
C16 |
C2 |
191.5 |
180.2 |
C12 |
C16 |
C2 |
H161 |
180.0 |
179.5 |
C4 |
C3 |
C2 |
C16 |
358.9 |
0.2 |
C2 |
C3 |
C4 |
H31 |
180.0 |
180.1 |
C5 |
C4 |
C3 |
H41 |
180.0 |
180.0 |
C3 |
C4 |
C5 |
N6 |
187.7 |
180.0 |
C3 |
C4 |
C5 |
C12 |
8.7 |
0.0 |
H31 |
C3 |
C2 |
C16 |
178.9 |
180.3 |
C2 |
C3 |
H31 |
C4 |
180.0 |
179.9 |
H31 |
C3 |
C4 |
C5 |
178.4 |
179.9 |
H31 |
C3 |
C4 |
H41 |
358.4 |
359.9 |
C5 |
C4 |
C3 |
H31 |
178.4 |
179.9 |
C3 |
C4 |
C5 |
H41 |
180.0 |
180.0 |
N6 |
C5 |
C4 |
C12 |
179.0 |
179.9 |
C4 |
C5 |
N6 |
C7 |
77.5 |
269.7 |
C4 |
C5 |
N6 |
C11 |
254.2 |
90.1 |
C4 |
C5 |
C12 |
N13 |
166.0 |
180.0 |
C4 |
C5 |
C12 |
C16 |
347.2 |
359.7 |
H41 |
C4 |
C3 |
H31 |
358.4 |
359.9 |
C3 |
C4 |
H41 |
C5 |
180.0 |
180.0 |
H41 |
C4 |
C5 |
N6 |
7.7 |
360.0 |
H41 |
C4 |
C5 |
C12 |
188.7 |
180.0 |
N6 |
C5 |
C4 |
H41 |
7.7 |
360.0 |
C4 |
C5 |
N6 |
C12 |
181.1 |
180.1 |
N6 |
C5 |
C12 |
N13 |
347.1 |
0.1 |
N6 |
C5 |
C12 |
C16 |
168.2 |
179.7 |
C7 |
N6 |
C5 |
C11 |
183.3 |
179.6 |
C5 |
N6 |
C7 |
O8 |
359.1 |
359.9 |
C5 |
N6 |
C7 |
C9 |
180.3 |
179.5 |
C5 |
N6 |
C11 |
C10 |
177.3 |
197.0 |
C5 |
N6 |
C11 |
H111 |
52.1 |
316.0 |
C5 |
N6 |
C11 |
H112 |
302.6 |
78.0 |
C2 |
C16 |
C12 |
C5 |
10.4 |
0.6 |
C12 |
C5 |
C4 |
H41 |
188.7 |
180.0 |
C4 |
C5 |
C12 |
N6 |
178.9 |
179.9 |
C12 |
C5 |
N6 |
C7 |
256.5 |
89.6 |
C12 |
C5 |
N6 |
C11 |
73.1 |
270.0 |
N13 |
C12 |
C5 |
C16 |
178.8 |
180.3 |
C5 |
C12 |
N13 |
O14 |
269.3 |
180.0 |
C5 |
C12 |
N13 |
O15 |
89.8 |
359.9 |
C5 |
C12 |
C16 |
H161 |
190.4 |
180.0 |
C7 |
N6 |
C5 |
C12 |
256.5 |
89.6 |
C5 |
N6 |
C7 |
C11 |
176.9 |
180.3 |
C7 |
N6 |
C11 |
C10 |
354.3 |
17.3 |
C7 |
N6 |
C11 |
H111 |
229.0 |
136.3 |
C7 |
N6 |
C11 |
H112 |
119.6 |
258.3 |
O8 |
C7 |
N6 |
C9 |
178.9 |
180.4 |
N6 |
C7 |
C9 |
C10 |
0.5 |
344.1 |
N6 |
C7 |
C9 |
H91 |
235.2 |
225.4 |
N6 |
C7 |
C9 |
H92 |
125.7 |
102.8 |
C11 |
N6 |
C5 |
C12 |
73.1 |
270.0 |
C5 |
N6 |
C11 |
C7 |
183.0 |
179.7 |
C11 |
N6 |
C7 |
O8 |
182.3 |
179.5 |
C11 |
N6 |
C7 |
C9 |
3.4 |
359.1 |
C9 |
C10 |
C11 |
N6 |
5.5 |
334.5 |
N6 |
C11 |
C10 |
H101 |
130.8 |
92.7 |
N6 |
C11 |
C10 |
H102 |
240.2 |
216.4 |
C10 |
C11 |
N6 |
H111 |
125.3 |
241.0 |
C10 |
C11 |
N6 |
H112 |
234.7 |
119.0 |
H111 |
C11 |
N6 |
H112 |
109.4 |
238.0 |
O8 |
C7 |
N6 |
C11 |
182.3 |
179.5 |
N6 |
C7 |
O8 |
C9 |
181.3 |
179.5 |
O8 |
C7 |
C9 |
C10 |
181.5 |
163.7 |
O8 |
C7 |
C9 |
H91 |
56.3 |
45.0 |
O8 |
C7 |
C9 |
H92 |
306.8 |
282.4 |
C9 |
C7 |
N6 |
C11 |
3.4 |
359.1 |
N6 |
C7 |
C9 |
O8 |
178.9 |
180.4 |
C10 |
C9 |
C7 |
H91 |
125.2 |
118.7 |
C10 |
C9 |
C7 |
H92 |
234.7 |
241.4 |
C7 |
C9 |
C10 |
C11 |
356.2 |
24.6 |
C7 |
C9 |
C10 |
H101 |
230.9 |
266.5 |
C7 |
C9 |
C10 |
H102 |
121.5 |
142.7 |
H91 |
C9 |
C7 |
H92 |
109.5 |
122.7 |
N6 |
C11 |
C10 |
C9 |
5.5 |
334.5 |
C7 |
C9 |
C10 |
H91 |
234.7 |
241.1 |
C7 |
C9 |
C10 |
H92 |
125.3 |
118.5 |
H91 |
C9 |
C10 |
H92 |
250.5 |
237.3 |
C11 |
C10 |
C9 |
H101 |
125.3 |
118.1 |
C11 |
C10 |
C9 |
H102 |
234.7 |
241.9 |
C9 |
C10 |
C11 |
H111 |
130.8 |
215.6 |
C9 |
C10 |
C11 |
H112 |
240.3 |
93.6 |
H101 |
C10 |
C9 |
H102 |
109.5 |
123.8 |
C7 |
C9 |
H91 |
C10 |
120.0 |
114.9 |
C7 |
C9 |
H91 |
H92 |
240.0 |
237.5 |
C10 |
C9 |
H91 |
H92 |
120.0 |
122.6 |
H91 |
C9 |
C10 |
C11 |
121.5 |
143.5 |
H91 |
C9 |
C10 |
H101 |
356.2 |
25.4 |
H91 |
C9 |
C10 |
H102 |
246.7 |
261.6 |
C7 |
C9 |
H92 |
C10 |
240.0 |
245.3 |
C7 |
C9 |
H92 |
H91 |
120.0 |
122.7 |
C10 |
C9 |
H92 |
H91 |
240.0 |
237.4 |
H92 |
C9 |
C10 |
C11 |
230.9 |
266.1 |
H92 |
C9 |
C10 |
H101 |
105.7 |
148.0 |
H92 |
C9 |
C10 |
H102 |
356.2 |
24.2 |
N6 |
C11 |
C10 |
H111 |
234.7 |
119.0 |
N6 |
C11 |
C10 |
H112 |
125.3 |
241.0 |
C11 |
C10 |
C9 |
H91 |
121.5 |
143.5 |
C11 |
C10 |
C9 |
H92 |
230.9 |
266.1 |
C9 |
C10 |
C11 |
H101 |
234.7 |
241.9 |
C9 |
C10 |
C11 |
H102 |
125.3 |
118.1 |
H101 |
C10 |
C11 |
H102 |
250.5 |
236.3 |
H111 |
C11 |
C10 |
H112 |
250.6 |
122.0 |
H101 |
C10 |
C9 |
H91 |
356.2 |
25.4 |
H101 |
C10 |
C9 |
H92 |
105.7 |
148.0 |
C9 |
C10 |
H101 |
C11 |
121.4 |
112.4 |
C9 |
C10 |
H101 |
H102 |
240.7 |
236.1 |
C11 |
C10 |
H101 |
H102 |
119.3 |
123.8 |
H101 |
C10 |
C11 |
H111 |
256.1 |
333.7 |
H101 |
C10 |
C11 |
H112 |
5.5 |
211.7 |
H102 |
C10 |
C9 |
H91 |
246.7 |
261.6 |
H102 |
C10 |
C9 |
H92 |
356.2 |
24.2 |
C9 |
C10 |
H102 |
C11 |
238.6 |
247.6 |
C9 |
C10 |
H102 |
H101 |
119.3 |
123.9 |
C11 |
C10 |
H102 |
H101 |
240.7 |
236.2 |
H102 |
C10 |
C11 |
H111 |
5.5 |
97.4 |
H102 |
C10 |
C11 |
H112 |
115.0 |
335.5 |
N6 |
C11 |
H111 |
C10 |
119.9 |
244.0 |
N6 |
C11 |
H111 |
H112 |
239.9 |
122.0 |
H111 |
C11 |
C10 |
H101 |
256.1 |
333.7 |
H111 |
C11 |
C10 |
H102 |
5.5 |
97.4 |
C10 |
C11 |
H111 |
H112 |
120.1 |
238.0 |
N6 |
C11 |
H112 |
C10 |
240.2 |
116.0 |
N6 |
C11 |
H112 |
H111 |
120.1 |
238.0 |
H112 |
C11 |
C10 |
H101 |
5.5 |
211.7 |
H112 |
C11 |
C10 |
H102 |
115.0 |
335.5 |
C10 |
C11 |
H112 |
H111 |
239.9 |
121.9 |
C2 |
C16 |
C12 |
N13 |
191.5 |
180.2 |
C5 |
C12 |
N13 |
C16 |
181.2 |
179.7 |
N13 |
C12 |
C16 |
H161 |
11.5 |
359.7 |
O14 |
N13 |
C12 |
O15 |
179.5 |
180.0 |
C2 |
C16 |
C12 |
H161 |
180.0 |
180.5 |
C5 |
C12 |
C16 |
N13 |
178.9 |
180.3 |
C16 |
C12 |
N13 |
O14 |
88.1 |
0.3 |
C16 |
C12 |
N13 |
O15 |
268.7 |
180.2 |
O14 |
N13 |
C12 |
C16 |
88.1 |
0.3 |
C12 |
N13 |
O14 |
O15 |
180.6 |
180.0 |
O15 |
N13 |
C12 |
C16 |
268.7 |
180.2 |
C12 |
N13 |
O15 |
O14 |
179.4 |
180.0 |
C2 |
C16 |
H161 |
C12 |
180.0 |
179.5 |
H171 |
N17 |
S1 |
O18 |
168.6 |
112.6 |
H171 |
N17 |
S1 |
O19 |
299.4 |
247.3 |
S1 |
N17 |
H171 |
H172 |
118.5 |
179.8 |
H172 |
N17 |
S1 |
O18 |
293.9 |
292.4 |
H172 |
N17 |
S1 |
O19 |
64.7 |
67.1 |
S1 |
N17 |
H172 |
H171 |
234.8 |
180.2 |