PDB Chemical Component SF8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SF8
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O17 |
C1 |
1.241 |
1.208 |
| C2 |
C1 |
1.535 |
1.507 |
| C1 |
O18 |
1.274 |
1.342 |
| C2 |
C3 |
1.548 |
1.530 |
| C2 |
H2 |
1.100 |
1.090 |
| C2 |
H2A |
1.100 |
1.090 |
| C4 |
C3 |
1.516 |
1.529 |
| C20 |
C3 |
1.533 |
1.507 |
| C3 |
O19 |
1.453 |
1.429 |
| C4 |
C5 |
1.514 |
1.507 |
| C4 |
H4 |
1.100 |
1.089 |
| C4 |
H4A |
1.100 |
1.090 |
| C5 |
O23 |
1.217 |
1.213 |
| C5 |
N6 |
1.345 |
1.347 |
| N6 |
C7 |
1.462 |
1.465 |
| N6 |
HN6 |
1.000 |
0.970 |
| C24 |
C7 |
1.508 |
1.508 |
| C7 |
C8 |
1.528 |
1.530 |
| C7 |
H7 |
1.100 |
1.091 |
| C8 |
C9 |
1.522 |
1.530 |
| C8 |
H8 |
1.100 |
1.090 |
| C8 |
H8A |
1.100 |
1.091 |
| C9 |
C10 |
1.509 |
1.530 |
| C9 |
H9 |
1.100 |
1.090 |
| C9 |
H9A |
1.100 |
1.091 |
| C10 |
N11 |
1.460 |
1.465 |
| C10 |
H10 |
1.100 |
1.090 |
| C10 |
H10A |
1.100 |
1.090 |
| N11 |
C12 |
1.348 |
1.348 |
| N11 |
HN11 |
1.001 |
0.970 |
| C12 |
C13 |
1.552 |
1.507 |
| C12 |
O27 |
1.222 |
1.212 |
| C14 |
C13 |
1.535 |
1.531 |
| C13 |
H13 |
1.100 |
1.090 |
| C13 |
H13A |
1.100 |
1.089 |
| O29 |
C14 |
1.418 |
1.429 |
| C28 |
C14 |
1.506 |
1.507 |
| C14 |
C15 |
1.522 |
1.530 |
| C16 |
C15 |
1.547 |
1.507 |
| C15 |
H15 |
1.100 |
1.090 |
| C15 |
H15A |
1.100 |
1.090 |
| O32 |
C16 |
1.212 |
1.208 |
| C16 |
O33 |
1.209 |
1.343 |
| O18 |
HO18 |
0.950 |
0.967 |
| O19 |
HO19 |
0.950 |
0.967 |
| O21 |
C20 |
1.246 |
1.208 |
| C20 |
O22 |
1.274 |
1.342 |
| O22 |
HO22 |
0.950 |
0.966 |
| O26 |
C24 |
1.252 |
1.208 |
| C24 |
O25 |
1.255 |
1.342 |
| O25 |
HO25 |
0.950 |
0.967 |
| O30 |
C28 |
1.248 |
1.208 |
| C28 |
O31 |
1.221 |
1.343 |
| O29 |
HO29 |
0.950 |
0.967 |
| O31 |
HO31 |
0.950 |
0.966 |
| O33 |
HO33 |
0.950 |
0.966 |
Bond Angles for SF8
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O17 |
C1 |
O18 |
124.4 |
120.0 |
| C2 |
C1 |
O18 |
120.7 |
120.0 |
| C1 |
O18 |
HO18 |
109.5 |
117.0 |
| C3 |
C2 |
H2 |
105.6 |
109.5 |
| C3 |
C2 |
H2A |
105.6 |
109.5 |
| C2 |
C3 |
O19 |
110.5 |
109.5 |
| H2 |
C2 |
H2A |
113.0 |
109.5 |
| C4 |
C3 |
O19 |
109.6 |
109.5 |
| C3 |
O19 |
HO19 |
109.5 |
114.1 |
| C5 |
C4 |
H4 |
109.0 |
109.5 |
| C5 |
C4 |
H4A |
109.0 |
109.4 |
| C4 |
C5 |
O23 |
119.5 |
120.0 |
| C4 |
C5 |
N6 |
116.3 |
120.0 |
| H4 |
C4 |
H4A |
109.9 |
109.4 |
| N6 |
C5 |
O23 |
124.2 |
120.0 |
| C5 |
N6 |
C7 |
127.2 |
120.0 |
| C5 |
N6 |
HN6 |
116.4 |
120.0 |
| C7 |
N6 |
HN6 |
116.4 |
120.0 |
| N6 |
C7 |
C8 |
109.8 |
109.5 |
| N6 |
C7 |
H7 |
107.0 |
109.5 |
| C24 |
C7 |
H7 |
108.1 |
109.4 |
| C8 |
C7 |
H7 |
110.8 |
109.5 |
| C7 |
C8 |
C9 |
108.3 |
109.4 |
| C7 |
C8 |
H8 |
109.9 |
109.5 |
| C7 |
C8 |
H8A |
109.9 |
109.5 |
| C9 |
C8 |
H8 |
109.9 |
109.5 |
| C9 |
C8 |
H8A |
109.8 |
109.4 |
| C8 |
C9 |
C10 |
114.4 |
109.5 |
| C8 |
C9 |
H9 |
107.9 |
109.5 |
| C8 |
C9 |
H9A |
107.8 |
109.5 |
| H8 |
C8 |
H8A |
109.1 |
109.5 |
| C10 |
C9 |
H9 |
107.9 |
109.5 |
| C10 |
C9 |
H9A |
107.9 |
109.4 |
| C9 |
C10 |
N11 |
108.9 |
109.5 |
| C9 |
C10 |
H10 |
109.7 |
109.5 |
| C9 |
C10 |
H10A |
109.7 |
109.5 |
| H9 |
C9 |
H9A |
111.0 |
109.4 |
| N11 |
C10 |
H10 |
109.7 |
109.5 |
| N11 |
C10 |
H10A |
109.7 |
109.4 |
| C10 |
N11 |
C12 |
125.0 |
120.0 |
| C10 |
N11 |
HN11 |
117.5 |
120.0 |
| H10 |
C10 |
H10A |
109.2 |
109.5 |
| C12 |
N11 |
HN11 |
117.5 |
120.0 |
| N11 |
C12 |
C13 |
117.8 |
120.0 |
| N11 |
C12 |
O27 |
120.7 |
120.0 |
| C13 |
C12 |
O27 |
121.5 |
120.0 |
| C12 |
C13 |
H13 |
108.2 |
109.5 |
| C12 |
C13 |
H13A |
108.2 |
109.5 |
| C14 |
C13 |
H13 |
108.2 |
109.5 |
| C14 |
C13 |
H13A |
108.2 |
109.4 |
| H13 |
C13 |
H13A |
110.7 |
109.5 |
| C14 |
C15 |
H15 |
106.9 |
109.5 |
| C14 |
C15 |
H15A |
106.9 |
109.5 |
| C16 |
C15 |
H15 |
106.9 |
109.5 |
| C16 |
C15 |
H15A |
106.9 |
109.5 |
| H15 |
C15 |
H15A |
111.9 |
109.4 |
| O32 |
C16 |
O33 |
115.1 |
119.9 |
| C16 |
O33 |
HO33 |
109.5 |
117.0 |
| O21 |
C20 |
O22 |
120.6 |
120.0 |
| C20 |
O22 |
HO22 |
109.5 |
117.1 |
| C24 |
O25 |
HO25 |
109.5 |
117.0 |
| O30 |
C28 |
O31 |
121.7 |
119.9 |
| C28 |
O31 |
HO31 |
109.5 |
117.0 |
Torsion Angles for SF8
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
O17 |
O18 |
182.9 |
179.7 |
| O17 |
C1 |
O18 |
HO18 |
0.0 |
359.7 |
| O17 |
C1 |
C2 |
O18 |
177.2 |
180.3 |
| C2 |
C1 |
O18 |
HO18 |
177.0 |
180.0 |
| C3 |
C2 |
C1 |
O18 |
3.8 |
180.0 |
| H2 |
C2 |
C3 |
H2A |
120.0 |
120.0 |
| C4 |
C3 |
C2 |
O19 |
240.3 |
240.0 |
| C2 |
C3 |
O19 |
HO19 |
180.0 |
300.0 |
| H2 |
C2 |
C1 |
O18 |
123.8 |
300.0 |
| C3 |
C2 |
H2 |
H2A |
245.0 |
240.0 |
| H2 |
C2 |
C3 |
O19 |
190.2 |
180.0 |
| H2A |
C2 |
C1 |
O18 |
243.8 |
60.0 |
| C3 |
C2 |
H2A |
H2 |
115.0 |
120.0 |
| H2A |
C2 |
C3 |
O19 |
70.3 |
60.0 |
| C4 |
C3 |
C2 |
H2 |
70.5 |
60.0 |
| C4 |
C3 |
C2 |
H2A |
310.5 |
300.0 |
| C2 |
C3 |
C4 |
O19 |
120.3 |
120.0 |
| C4 |
C3 |
O19 |
HO19 |
298.7 |
60.0 |
| C20 |
C3 |
C2 |
H2 |
306.8 |
300.0 |
| C20 |
C3 |
C2 |
H2A |
186.8 |
180.0 |
| C20 |
C3 |
O19 |
HO19 |
64.5 |
180.0 |
| O19 |
C3 |
C2 |
H2 |
190.2 |
180.0 |
| O19 |
C3 |
C2 |
H2A |
70.3 |
60.0 |
| C5 |
C4 |
C3 |
O19 |
44.3 |
65.0 |
| H4 |
C4 |
C5 |
H4A |
120.0 |
119.9 |
| N6 |
C5 |
C4 |
O23 |
179.6 |
180.0 |
| C4 |
C5 |
N6 |
C7 |
174.1 |
180.0 |
| C4 |
C5 |
N6 |
HN6 |
354.1 |
0.0 |
| H4 |
C4 |
C3 |
O19 |
164.3 |
185.0 |
| C5 |
C4 |
H4 |
H4A |
240.5 |
240.1 |
| H4 |
C4 |
C5 |
O23 |
304.2 |
240.0 |
| H4 |
C4 |
C5 |
N6 |
123.8 |
60.0 |
| H4A |
C4 |
C3 |
O19 |
284.3 |
305.0 |
| C5 |
C4 |
H4A |
H4 |
119.5 |
119.9 |
| H4A |
C4 |
C5 |
O23 |
184.2 |
120.0 |
| H4A |
C4 |
C5 |
N6 |
3.7 |
300.1 |
| O23 |
C5 |
C4 |
H4 |
304.2 |
240.0 |
| O23 |
C5 |
C4 |
H4A |
184.2 |
120.0 |
| C4 |
C5 |
O23 |
N6 |
179.5 |
180.0 |
| O23 |
C5 |
N6 |
C7 |
353.7 |
0.0 |
| O23 |
C5 |
N6 |
HN6 |
173.7 |
180.0 |
| N6 |
C5 |
C4 |
H4 |
123.8 |
60.0 |
| N6 |
C5 |
C4 |
H4A |
3.7 |
300.1 |
| C4 |
C5 |
N6 |
O23 |
180.5 |
180.0 |
| C7 |
N6 |
C5 |
HN6 |
180.0 |
180.0 |
| C5 |
N6 |
C7 |
C8 |
237.9 |
205.0 |
| C5 |
N6 |
C7 |
H7 |
358.2 |
325.1 |
| C7 |
N6 |
C5 |
O23 |
353.7 |
0.0 |
| C5 |
N6 |
C7 |
HN6 |
180.0 |
180.0 |
| C24 |
C7 |
N6 |
H7 |
118.5 |
119.9 |
| C8 |
C7 |
N6 |
H7 |
239.7 |
239.9 |
| N6 |
C7 |
C8 |
C9 |
46.6 |
65.0 |
| N6 |
C7 |
C8 |
H8 |
166.6 |
185.0 |
| N6 |
C7 |
C8 |
H8A |
286.6 |
305.0 |
| HN6 |
N6 |
C5 |
O23 |
173.7 |
180.0 |
| C5 |
N6 |
HN6 |
C7 |
180.0 |
180.0 |
| HN6 |
N6 |
C7 |
C8 |
57.9 |
25.0 |
| HN6 |
N6 |
C7 |
H7 |
178.2 |
145.0 |
| C24 |
C7 |
N6 |
HN6 |
296.7 |
264.9 |
| N6 |
C7 |
C24 |
H7 |
242.2 |
240.0 |
| C8 |
C7 |
C24 |
H7 |
120.3 |
120.0 |
| C24 |
C7 |
C8 |
H8 |
290.1 |
305.0 |
| C24 |
C7 |
C8 |
H8A |
50.0 |
65.0 |
| C8 |
C7 |
N6 |
HN6 |
57.9 |
25.0 |
| N6 |
C7 |
C8 |
H7 |
117.9 |
120.1 |
| C24 |
C7 |
C8 |
H7 |
241.4 |
240.1 |
| C9 |
C8 |
C7 |
H8 |
240.0 |
240.0 |
| C9 |
C8 |
C7 |
H8A |
120.0 |
120.0 |
| C7 |
C8 |
C9 |
C10 |
152.7 |
180.0 |
| C7 |
C8 |
C9 |
H9 |
272.7 |
300.0 |
| C7 |
C8 |
C9 |
H9A |
32.6 |
60.0 |
| H8 |
C8 |
C7 |
H8A |
240.0 |
240.0 |
| H7 |
C7 |
N6 |
HN6 |
178.2 |
145.0 |
| N6 |
C7 |
H7 |
C8 |
240.4 |
239.9 |
| H7 |
C7 |
C8 |
C9 |
288.7 |
304.9 |
| H7 |
C7 |
C8 |
H8 |
48.7 |
65.0 |
| H7 |
C7 |
C8 |
H8A |
168.7 |
185.0 |
| C9 |
C8 |
C7 |
H7 |
288.7 |
304.9 |
| C7 |
C8 |
C9 |
H8 |
120.0 |
120.0 |
| C7 |
C8 |
C9 |
H8A |
240.0 |
240.0 |
| H8 |
C8 |
C9 |
H8A |
120.0 |
120.0 |
| C10 |
C9 |
C8 |
H9 |
240.0 |
240.0 |
| C10 |
C9 |
C8 |
H9A |
120.0 |
120.0 |
| C8 |
C9 |
C10 |
N11 |
187.1 |
180.0 |
| C8 |
C9 |
C10 |
H10 |
307.2 |
300.0 |
| C8 |
C9 |
C10 |
H10A |
67.1 |
60.0 |
| H9 |
C9 |
C8 |
H9A |
240.0 |
240.0 |
| H8 |
C8 |
C7 |
H7 |
48.7 |
65.0 |
| C7 |
C8 |
H8 |
C9 |
240.9 |
240.0 |
| C7 |
C8 |
H8 |
H8A |
120.5 |
120.0 |
| C9 |
C8 |
H8 |
H8A |
239.5 |
240.0 |
| H8 |
C8 |
C9 |
C10 |
32.6 |
60.0 |
| H8 |
C8 |
C9 |
H9 |
152.6 |
180.0 |
| H8 |
C8 |
C9 |
H9A |
272.6 |
300.0 |
| H8A |
C8 |
C7 |
H7 |
168.7 |
185.0 |
| C7 |
C8 |
H8A |
C9 |
119.1 |
120.0 |
| C7 |
C8 |
H8A |
H8 |
239.5 |
240.0 |
| C9 |
C8 |
H8A |
H8 |
120.5 |
120.0 |
| H8A |
C8 |
C9 |
C10 |
272.7 |
300.0 |
| H8A |
C8 |
C9 |
H9 |
32.7 |
60.0 |
| H8A |
C8 |
C9 |
H9A |
152.6 |
180.0 |
| C10 |
C9 |
C8 |
H8 |
32.6 |
60.0 |
| C10 |
C9 |
C8 |
H8A |
272.7 |
300.0 |
| C8 |
C9 |
C10 |
H9 |
120.0 |
120.1 |
| C8 |
C9 |
C10 |
H9A |
240.0 |
240.0 |
| H9 |
C9 |
C10 |
H9A |
120.0 |
119.9 |
| N11 |
C10 |
C9 |
H10 |
240.0 |
239.9 |
| N11 |
C10 |
C9 |
H10A |
120.0 |
120.0 |
| C9 |
C10 |
N11 |
C12 |
151.2 |
180.0 |
| C9 |
C10 |
N11 |
HN11 |
331.2 |
0.0 |
| H10 |
C10 |
C9 |
H10A |
240.0 |
240.0 |
| H9 |
C9 |
C8 |
H8 |
152.6 |
180.0 |
| H9 |
C9 |
C8 |
H8A |
32.7 |
60.0 |
| C8 |
C9 |
H9 |
C10 |
236.0 |
239.9 |
| C8 |
C9 |
H9 |
H9A |
118.0 |
120.0 |
| C10 |
C9 |
H9 |
H9A |
242.0 |
240.1 |
| H9 |
C9 |
C10 |
N11 |
67.1 |
59.9 |
| H9 |
C9 |
C10 |
H10 |
187.2 |
180.0 |
| H9 |
C9 |
C10 |
H10A |
307.1 |
300.0 |
| H9A |
C9 |
C8 |
H8 |
272.6 |
300.0 |
| H9A |
C9 |
C8 |
H8A |
152.6 |
180.0 |
| C8 |
C9 |
H9A |
C10 |
124.0 |
120.0 |
| C8 |
C9 |
H9A |
H9 |
242.0 |
239.9 |
| C10 |
C9 |
H9A |
H9 |
118.0 |
119.9 |
| H9A |
C9 |
C10 |
N11 |
307.1 |
300.0 |
| H9A |
C9 |
C10 |
H10 |
67.1 |
60.1 |
| H9A |
C9 |
C10 |
H10A |
187.1 |
180.1 |
| N11 |
C10 |
C9 |
H9 |
67.1 |
59.9 |
| N11 |
C10 |
C9 |
H9A |
307.1 |
300.0 |
| C9 |
C10 |
N11 |
H10 |
120.0 |
120.0 |
| C9 |
C10 |
N11 |
H10A |
240.0 |
240.0 |
| H10 |
C10 |
N11 |
H10A |
119.9 |
120.0 |
| C12 |
N11 |
C10 |
HN11 |
180.0 |
179.9 |
| C10 |
N11 |
C12 |
C13 |
180.1 |
180.0 |
| C10 |
N11 |
C12 |
O27 |
0.4 |
0.1 |
| H10 |
C10 |
C9 |
H9 |
187.2 |
180.0 |
| H10 |
C10 |
C9 |
H9A |
67.1 |
60.1 |
| C9 |
C10 |
H10 |
N11 |
240.5 |
240.0 |
| C9 |
C10 |
H10 |
H10A |
120.2 |
120.0 |
| N11 |
C10 |
H10 |
H10A |
239.8 |
240.0 |
| H10 |
C10 |
N11 |
C12 |
31.2 |
59.9 |
| H10 |
C10 |
N11 |
HN11 |
211.2 |
240.0 |
| H10A |
C10 |
C9 |
H9 |
307.1 |
300.0 |
| H10A |
C10 |
C9 |
H9A |
187.1 |
180.1 |
| C9 |
C10 |
H10A |
N11 |
119.5 |
120.0 |
| C9 |
C10 |
H10A |
H10 |
239.7 |
240.0 |
| N11 |
C10 |
H10A |
H10 |
120.2 |
120.0 |
| H10A |
C10 |
N11 |
C12 |
271.3 |
300.0 |
| H10A |
C10 |
N11 |
HN11 |
91.3 |
120.0 |
| C12 |
N11 |
C10 |
H10 |
31.2 |
59.9 |
| C12 |
N11 |
C10 |
H10A |
271.3 |
300.0 |
| C10 |
N11 |
C12 |
HN11 |
180.0 |
180.1 |
| C13 |
C12 |
N11 |
O27 |
179.7 |
179.9 |
| N11 |
C12 |
C13 |
H13 |
155.9 |
300.1 |
| N11 |
C12 |
C13 |
H13A |
275.9 |
60.1 |
| HN11 |
N11 |
C10 |
H10 |
211.2 |
240.0 |
| HN11 |
N11 |
C10 |
H10A |
91.3 |
120.0 |
| C10 |
N11 |
HN11 |
C12 |
180.0 |
179.9 |
| HN11 |
N11 |
C12 |
C13 |
0.1 |
359.9 |
| HN11 |
N11 |
C12 |
O27 |
180.4 |
180.0 |
| C13 |
C12 |
N11 |
HN11 |
0.1 |
359.9 |
| N11 |
C12 |
C13 |
O27 |
180.3 |
180.1 |
| C14 |
C13 |
C12 |
H13 |
240.0 |
240.0 |
| C14 |
C13 |
C12 |
H13A |
120.0 |
119.9 |
| H13 |
C13 |
C12 |
H13A |
240.0 |
240.0 |
| O27 |
C12 |
N11 |
HN11 |
180.4 |
180.0 |
| N11 |
C12 |
O27 |
C13 |
179.7 |
179.9 |
| O27 |
C12 |
C13 |
H13 |
335.6 |
120.0 |
| O27 |
C12 |
C13 |
H13A |
95.6 |
240.0 |
| C14 |
C13 |
C12 |
O27 |
215.6 |
359.9 |
| C12 |
C13 |
C14 |
H13 |
120.0 |
120.0 |
| C12 |
C13 |
C14 |
H13A |
240.0 |
240.0 |
| H13 |
C13 |
C14 |
H13A |
120.0 |
120.0 |
| H13 |
C13 |
C12 |
O27 |
335.6 |
120.0 |
| C12 |
C13 |
H13 |
H13A |
118.4 |
120.0 |
| C14 |
C13 |
H13 |
H13A |
241.5 |
240.0 |
| H13A |
C13 |
C12 |
O27 |
95.6 |
240.0 |
| C12 |
C13 |
H13A |
H13 |
241.5 |
240.0 |
| C14 |
C13 |
H13A |
H13 |
118.5 |
120.0 |
| O29 |
C14 |
C13 |
H13 |
177.2 |
180.0 |
| O29 |
C14 |
C13 |
H13A |
57.2 |
60.0 |
| O29 |
C14 |
C15 |
H15 |
169.3 |
185.0 |
| O29 |
C14 |
C15 |
H15A |
289.3 |
305.0 |
| C28 |
C14 |
C13 |
H13 |
298.9 |
300.0 |
| C28 |
C14 |
C13 |
H13A |
178.9 |
180.0 |
| C28 |
C14 |
C15 |
H15 |
52.3 |
65.0 |
| C28 |
C14 |
C15 |
H15A |
172.3 |
185.0 |
| C15 |
C14 |
C13 |
H13 |
57.4 |
60.0 |
| C15 |
C14 |
C13 |
H13A |
297.4 |
300.0 |
| C16 |
C15 |
C14 |
H15 |
240.0 |
240.0 |
| C16 |
C15 |
C14 |
H15A |
120.0 |
120.0 |
| H15 |
C15 |
C14 |
H15A |
240.0 |
240.0 |
| C14 |
C15 |
C16 |
H15 |
120.0 |
120.1 |
| C14 |
C15 |
C16 |
H15A |
240.0 |
240.0 |
| H15 |
C15 |
C16 |
H15A |
120.0 |
119.9 |
| C14 |
C15 |
H15 |
H15A |
116.8 |
120.0 |
| C16 |
C15 |
H15 |
H15A |
243.3 |
240.0 |
| C14 |
C15 |
H15A |
H15 |
243.2 |
240.0 |
| C16 |
C15 |
H15A |
H15 |
116.7 |
120.0 |
| O32 |
C16 |
C15 |
H15 |
250.0 |
240.0 |
| O32 |
C16 |
C15 |
H15A |
130.0 |
120.0 |
| O32 |
C16 |
O33 |
HO33 |
0.0 |
359.9 |
| O33 |
C16 |
C15 |
H15 |
64.2 |
59.9 |
| O33 |
C16 |
C15 |
H15A |
304.2 |
300.0 |
| O21 |
C20 |
O22 |
HO22 |
0.0 |
0.0 |
| O26 |
C24 |
C7 |
H7 |
129.1 |
120.0 |
| O26 |
C24 |
O25 |
HO25 |
360.0 |
360.0 |
| O25 |
C24 |
C7 |
H7 |
308.9 |
300.0 |
| O30 |
C28 |
O31 |
HO31 |
360.0 |
0.1 |