PDB Chemical Component SCX
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SCX
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N25 |
C16 |
1.354 |
1.385 |
| N17 |
C16 |
1.343 |
1.325 |
| N17 |
C18 |
1.339 |
1.323 |
| C16 |
N15 |
1.345 |
1.325 |
| C18 |
C13 |
1.390 |
1.386 |
| N15 |
C14 |
1.346 |
1.323 |
| C13 |
C14 |
1.374 |
1.386 |
| C13 |
C12 |
1.483 |
1.507 |
| N04 |
C05 |
1.336 |
1.313 |
| N04 |
N03 |
1.381 |
1.399 |
| C05 |
C01 |
1.425 |
1.388 |
| N10 |
C12 |
1.449 |
1.466 |
| N10 |
C09 |
1.388 |
1.379 |
| N03 |
C09 |
1.418 |
1.372 |
| N03 |
C02 |
1.390 |
1.371 |
| C09 |
C08 |
1.354 |
1.365 |
| C01 |
C02 |
1.382 |
1.390 |
| C01 |
C24 |
1.484 |
1.507 |
| C26 |
C24 |
1.518 |
1.530 |
| C02 |
N06 |
1.377 |
1.339 |
| F28 |
C23 |
1.344 |
1.351 |
| C08 |
C07 |
1.493 |
1.407 |
| N06 |
C07 |
1.293 |
1.324 |
| C07 |
C11 |
1.481 |
1.481 |
| C23 |
C11 |
1.395 |
1.398 |
| C23 |
C22 |
1.405 |
1.382 |
| C11 |
C19 |
1.392 |
1.397 |
| C22 |
C21 |
1.394 |
1.383 |
| C19 |
F27 |
1.324 |
1.351 |
| C19 |
C20 |
1.398 |
1.382 |
| C21 |
C20 |
1.397 |
1.383 |
| C05 |
H05 |
1.081 |
1.080 |
| C08 |
H08 |
1.080 |
1.080 |
| N10 |
HN10 |
1.000 |
0.970 |
| C12 |
H121 |
1.100 |
1.090 |
| C12 |
H122 |
1.100 |
1.090 |
| C14 |
H14 |
1.080 |
1.080 |
| C18 |
H18 |
1.080 |
1.080 |
| C20 |
H20 |
1.080 |
1.079 |
| C21 |
H21 |
1.080 |
1.081 |
| C22 |
H22 |
1.081 |
1.080 |
| C24 |
H241 |
1.100 |
1.090 |
| C24 |
H242 |
1.100 |
1.090 |
| N25 |
H251 |
1.000 |
0.970 |
| N25 |
H252 |
1.000 |
0.970 |
| C26 |
H261 |
1.100 |
1.091 |
| C26 |
H262 |
1.100 |
1.090 |
| C26 |
H263 |
1.100 |
1.090 |
Bond Angles for SCX
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N17 |
C18 |
H18 |
118.2 |
120.4 |
| N15 |
C14 |
H14 |
118.2 |
120.4 |
| C13 |
C14 |
H14 |
118.2 |
120.4 |
| C13 |
C12 |
H121 |
109.0 |
109.5 |
| C13 |
C12 |
H122 |
108.7 |
109.5 |
| N04 |
C05 |
H05 |
123.6 |
125.5 |
| N04 |
N03 |
C09 |
127.0 |
132.4 |
| C05 |
C01 |
C24 |
128.1 |
126.2 |
| C12 |
N10 |
HN10 |
103.3 |
119.9 |
| N10 |
C12 |
H121 |
109.0 |
109.5 |
| N10 |
C12 |
H122 |
108.7 |
109.4 |
| N03 |
C09 |
C08 |
117.8 |
119.1 |
| N03 |
C02 |
N06 |
122.2 |
120.8 |
| C09 |
C08 |
H08 |
121.4 |
120.4 |
| C02 |
C01 |
C24 |
127.2 |
126.2 |
| C01 |
C02 |
N06 |
131.2 |
132.4 |
| C01 |
C24 |
H241 |
108.5 |
109.4 |
| C01 |
C24 |
H242 |
107.8 |
109.4 |
| C26 |
C24 |
H241 |
108.5 |
109.5 |
| C26 |
C24 |
H242 |
107.9 |
109.5 |
| C02 |
N06 |
C07 |
116.7 |
120.9 |
| C08 |
C07 |
C11 |
116.0 |
119.9 |
| N06 |
C07 |
C11 |
119.0 |
119.9 |
| C07 |
C11 |
C19 |
118.9 |
120.2 |
| C23 |
C22 |
H22 |
120.0 |
119.9 |
| C11 |
C19 |
F27 |
120.9 |
120.1 |
| C11 |
C19 |
C20 |
121.5 |
119.8 |
| C22 |
C21 |
H21 |
120.3 |
119.8 |
| C20 |
C19 |
F27 |
117.6 |
120.1 |
| C19 |
C20 |
H20 |
120.1 |
119.9 |
| C21 |
C20 |
H20 |
120.0 |
119.9 |
| H121 |
C12 |
H122 |
110.6 |
109.5 |
| H241 |
C24 |
H242 |
111.7 |
109.5 |
| H251 |
N25 |
H252 |
109.5 |
120.1 |
| H261 |
C26 |
H262 |
109.5 |
109.5 |
| H261 |
C26 |
H263 |
109.5 |
109.4 |
| H262 |
C26 |
H263 |
109.5 |
109.5 |
Torsion Angles for SCX
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C16 |
N15 |
C14 |
H14 |
179.0 |
180.1 |
| C18 |
C13 |
C14 |
H14 |
181.5 |
180.2 |
| C18 |
C13 |
C12 |
H121 |
180.5 |
149.8 |
| C18 |
C13 |
C12 |
H122 |
301.1 |
29.7 |
| C13 |
C14 |
N15 |
H14 |
180.0 |
179.9 |
| N15 |
C14 |
C13 |
H14 |
180.0 |
180.1 |
| C14 |
C13 |
C12 |
H121 |
3.9 |
330.0 |
| C14 |
C13 |
C12 |
H122 |
124.5 |
210.0 |
| C13 |
C12 |
N10 |
HN10 |
215.2 |
359.9 |
| N10 |
C12 |
C13 |
H121 |
240.0 |
120.0 |
| N10 |
C12 |
C13 |
H122 |
119.4 |
240.0 |
| H121 |
C12 |
C13 |
H122 |
239.4 |
120.0 |
| C05 |
N04 |
N03 |
C09 |
183.2 |
179.8 |
| N04 |
C05 |
C01 |
C24 |
180.4 |
179.8 |
| N04 |
N03 |
C09 |
C08 |
180.8 |
180.0 |
| N04 |
N03 |
C02 |
N06 |
180.9 |
179.9 |
| C02 |
C01 |
C05 |
C24 |
180.8 |
179.8 |
| C05 |
C01 |
C02 |
N06 |
178.3 |
180.3 |
| C05 |
C01 |
C24 |
H241 |
244.4 |
24.7 |
| C05 |
C01 |
C24 |
H242 |
5.6 |
144.7 |
| C13 |
C12 |
N10 |
H121 |
120.0 |
240.0 |
| C13 |
C12 |
N10 |
H122 |
240.6 |
120.0 |
| H121 |
C12 |
N10 |
H122 |
120.6 |
240.0 |
| N10 |
C09 |
C08 |
H08 |
356.4 |
0.1 |
| C09 |
N03 |
C02 |
N06 |
358.6 |
359.9 |
| N03 |
C09 |
C08 |
H08 |
176.6 |
180.0 |
| N03 |
C02 |
C01 |
C24 |
180.1 |
180.0 |
| C01 |
C02 |
N03 |
N06 |
179.1 |
180.1 |
| N03 |
C02 |
N06 |
C07 |
359.4 |
0.1 |
| C09 |
C08 |
C07 |
C11 |
183.0 |
180.0 |
| C05 |
C01 |
C02 |
C24 |
179.3 |
180.2 |
| N03 |
C02 |
C01 |
N06 |
181.0 |
179.9 |
| C02 |
C01 |
C24 |
H241 |
63.5 |
205.0 |
| C02 |
C01 |
C24 |
H242 |
184.7 |
324.9 |
| C01 |
C02 |
N06 |
C07 |
180.5 |
180.0 |
| C24 |
C01 |
C02 |
N06 |
359.1 |
0.1 |
| C26 |
C24 |
C01 |
H241 |
240.0 |
240.0 |
| C26 |
C24 |
C01 |
H242 |
118.8 |
120.0 |
| H241 |
C24 |
C01 |
H242 |
238.8 |
240.0 |
| C01 |
C24 |
C26 |
H241 |
120.0 |
120.0 |
| C01 |
C24 |
C26 |
H242 |
241.3 |
240.0 |
| H241 |
C24 |
C26 |
H242 |
121.2 |
120.1 |
| N06 |
C02 |
C01 |
C24 |
359.1 |
0.1 |
| C02 |
N06 |
C07 |
C11 |
179.0 |
180.0 |
| F28 |
C23 |
C22 |
H22 |
0.5 |
0.1 |
| N03 |
C09 |
C08 |
C07 |
356.6 |
359.9 |
| N06 |
C07 |
C08 |
C11 |
178.4 |
180.1 |
| C08 |
C07 |
C11 |
C19 |
112.5 |
270.0 |
| C08 |
C07 |
N06 |
C11 |
181.6 |
179.9 |
| N06 |
C07 |
C11 |
C19 |
294.0 |
90.0 |
| C07 |
C11 |
C19 |
F27 |
0.4 |
359.9 |
| C07 |
C11 |
C19 |
C20 |
179.0 |
179.9 |
| C23 |
C11 |
C19 |
F27 |
180.4 |
180.2 |
| C23 |
C22 |
C21 |
H21 |
179.8 |
179.8 |
| C20 |
C19 |
C11 |
F27 |
178.6 |
180.0 |
| C11 |
C19 |
C20 |
H20 |
181.4 |
180.0 |
| C22 |
C21 |
C20 |
H20 |
179.2 |
180.0 |
| C11 |
C19 |
F27 |
C20 |
178.6 |
180.0 |
| F27 |
C19 |
C20 |
H20 |
0.1 |
360.0 |
| C11 |
C19 |
C20 |
F27 |
181.4 |
180.0 |
| C21 |
C20 |
C19 |
H20 |
180.0 |
180.1 |
| C21 |
C20 |
C19 |
F27 |
180.1 |
180.0 |
| C19 |
C20 |
C21 |
H20 |
180.0 |
179.9 |
| H05 |
C05 |
C01 |
C24 |
0.4 |
0.2 |
| H08 |
C08 |
C07 |
C11 |
3.1 |
359.9 |
| HN10 |
N10 |
C12 |
H121 |
95.2 |
119.9 |
| HN10 |
N10 |
C12 |
H122 |
334.7 |
239.9 |
| C13 |
C12 |
H121 |
H122 |
119.4 |
240.0 |
| H121 |
C12 |
N10 |
HN10 |
95.2 |
119.9 |
| N10 |
C12 |
H121 |
H122 |
240.6 |
120.0 |
| C13 |
C12 |
H122 |
H121 |
240.4 |
120.0 |
| H122 |
C12 |
N10 |
HN10 |
334.7 |
239.9 |
| N10 |
C12 |
H122 |
H121 |
119.6 |
240.0 |
| H20 |
C20 |
C19 |
F27 |
0.1 |
360.0 |
| H21 |
C21 |
C20 |
H20 |
359.2 |
0.0 |
| H22 |
C22 |
C21 |
H21 |
359.8 |
360.0 |
| C01 |
C24 |
H241 |
H242 |
118.8 |
119.9 |
| C26 |
C24 |
H241 |
H242 |
241.2 |
239.9 |
| C01 |
C24 |
H242 |
H241 |
240.8 |
240.1 |
| C26 |
C24 |
H242 |
H241 |
119.2 |
120.1 |
| H261 |
C26 |
C24 |
H241 |
3.3 |
60.0 |
| H261 |
C26 |
C24 |
H242 |
242.0 |
300.0 |
| H262 |
C26 |
H261 |
H263 |
120.0 |
120.0 |
| H262 |
C26 |
C24 |
H241 |
123.3 |
180.0 |
| H262 |
C26 |
C24 |
H242 |
2.0 |
59.9 |
| H261 |
C26 |
H262 |
H263 |
240.0 |
240.1 |
| H263 |
C26 |
C24 |
H241 |
243.2 |
300.1 |
| H263 |
C26 |
C24 |
H242 |
122.0 |
180.0 |
| H261 |
C26 |
H263 |
H262 |
120.0 |
120.0 |