PDB Chemical Component SCK

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SCK

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O13 C12 1.218 1.208
C12 O14 1.448 1.342
C12 C11 1.506 1.508
O14 C15 1.420 1.452
C15 C16 1.519 1.530
C15 H151 1.100 1.090
C15 H152 1.100 1.090
C16 N17 1.465 1.470
C16 H161 1.100 1.089
C16 H162 1.100 1.090
N17 C20 1.465 1.469
N17 C19 1.464 1.468
N17 C18 1.464 1.469
C20 H201 1.100 1.090
C20 H202 1.100 1.089
C20 H203 1.100 1.090
C19 H191 1.100 1.090
C19 H192 1.100 1.089
C19 H193 1.100 1.091
C18 H181 1.100 1.090
C18 H182 1.101 1.090
C18 H183 1.100 1.091
C11 C6 1.518 1.530
C11 H111 1.100 1.090
C11 H112 1.100 1.090
C6 C5 1.503 1.507
C6 H61 1.100 1.091
C6 H62 1.100 1.090
C5 O7 1.215 1.208
C5 O4 1.448 1.342
O4 C3 1.422 1.452
C3 C2 1.522 1.530
C3 H31 1.100 1.089
C3 H32 1.100 1.090
C2 N1 1.462 1.469
C2 H21 1.100 1.090
C2 H22 1.100 1.090
N1 C8 1.465 1.469
N1 C9 1.464 1.469
N1 C10 1.463 1.469
C8 H81 1.100 1.090
C8 H82 1.100 1.090
C8 H83 1.100 1.090
C9 H91 1.100 1.090
C9 H92 1.099 1.090
C9 H93 1.100 1.090
C10 H101 1.100 1.090
C10 H102 1.100 1.090
C10 H103 1.100 1.089

Bond Angles for SCK

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O13 C12 O14 119.2 120.0
O13 C12 C11 120.6 120.0
O14 C12 C11 120.2 120.0
C12 O14 C15 119.4 120.0
C12 C11 C6 108.6 109.5
C12 C11 H111 110.0 109.4
C12 C11 H112 109.8 109.5
O14 C15 C16 109.0 109.5
O14 C15 H151 109.8 109.4
O14 C15 H152 109.7 109.5
C16 C15 H151 109.7 109.4
C16 C15 H152 109.6 109.5
C15 C16 N17 108.1 109.4
C15 C16 H161 110.2 109.5
C15 C16 H162 109.9 109.5
H151 C15 H152 109.1 109.5
N17 C16 H161 110.2 109.4
N17 C16 H162 109.9 109.5
C16 N17 C20 109.8 109.4
C16 N17 C19 109.4 109.5
C16 N17 C18 108.8 109.4
H161 C16 H162 108.5 109.5
C20 N17 C19 109.7 109.5
C20 N17 C18 109.3 109.5
N17 C20 H201 109.5 109.4
N17 C20 H202 109.5 109.5
N17 C20 H203 109.5 109.4
C19 N17 C18 109.7 109.5
N17 C19 H191 109.4 109.5
N17 C19 H192 109.5 109.5
N17 C19 H193 109.5 109.5
N17 C18 H181 109.5 109.5
N17 C18 H182 109.5 109.5
N17 C18 H183 109.5 109.5
H201 C20 H202 109.5 109.5
H201 C20 H203 109.5 109.5
H202 C20 H203 109.5 109.5
H191 C19 H192 109.5 109.5
H191 C19 H193 109.4 109.5
H192 C19 H193 109.4 109.5
H181 C18 H182 109.5 109.5
H181 C18 H183 109.4 109.5
H182 C18 H183 109.5 109.4
C6 C11 H111 110.0 109.5
C6 C11 H112 109.8 109.5
C11 C6 C5 108.7 109.5
C11 C6 H61 109.9 109.5
C11 C6 H62 109.7 109.5
H111 C11 H112 108.8 109.5
C5 C6 H61 109.9 109.4
C5 C6 H62 109.7 109.5
C6 C5 O7 120.4 119.9
C6 C5 O4 120.2 120.0
H61 C6 H62 108.9 109.4
O7 C5 O4 119.4 120.0
C5 O4 C3 119.5 120.0
O4 C3 C2 109.6 109.5
O4 C3 H31 109.4 109.5
O4 C3 H32 109.4 109.5
C2 C3 H31 109.4 109.5
C2 C3 H32 109.5 109.5
C3 C2 N1 109.2 109.4
C3 C2 H21 109.6 109.5
C3 C2 H22 109.6 109.5
H31 C3 H32 109.6 109.5
N1 C2 H21 109.6 109.5
N1 C2 H22 109.5 109.4
C2 N1 C8 109.0 109.4
C2 N1 C9 109.8 109.5
C2 N1 C10 109.4 109.5
H21 C2 H22 109.3 109.5
C8 N1 C9 109.7 109.4
C8 N1 C10 109.8 109.5
N1 C8 H81 109.5 109.5
N1 C8 H82 109.4 109.5
N1 C8 H83 109.5 109.5
C9 N1 C10 109.1 109.5
N1 C9 H91 109.5 109.4
N1 C9 H92 109.5 109.5
N1 C9 H93 109.5 109.5
N1 C10 H101 109.5 109.5
N1 C10 H102 109.5 109.4
N1 C10 H103 109.5 109.4
H81 C8 H82 109.4 109.5
H81 C8 H83 109.5 109.5
H82 C8 H83 109.5 109.5
H91 C9 H92 109.5 109.5
H91 C9 H93 109.4 109.5
H92 C9 H93 109.5 109.5
H101 C10 H102 109.5 109.5
H101 C10 H103 109.4 109.5
H102 C10 H103 109.5 109.6

Torsion Angles for SCK

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O14 C12 O13 C11 180.3 180.0
O13 C12 O14 C15 233.5 359.9
O13 C12 C11 C6 346.1 0.0
O13 C12 C11 H111 225.8 120.0
O13 C12 C11 H112 106.1 240.0
O13 C12 O14 C11 179.7 180.0
O14 C12 C11 C6 165.9 180.0
O14 C12 C11 H111 45.5 299.9
O14 C12 C11 H112 285.9 60.0
C12 O14 C15 C16 202.2 180.0
C12 O14 C15 H151 82.0 60.1
C12 O14 C15 H152 322.2 300.0
O13 C12 C11 O14 180.3 180.0
C11 C12 O14 C15 53.7 180.0
C6 C11 C12 H111 120.4 240.1
C6 C11 C12 H112 240.0 120.0
C12 C11 C6 C5 79.6 180.0
C12 C11 C6 H61 319.3 300.0
C12 C11 C6 H62 199.6 59.9
H111 C11 C12 H112 119.7 240.0
C15 O14 C12 C11 53.7 180.0
C16 C15 O14 H151 120.2 119.9
C16 C15 O14 H152 240.0 240.0
O14 C15 C16 N17 170.3 67.5
O14 C15 C16 H161 49.7 307.5
O14 C15 C16 H162 290.2 187.5
H151 C15 O14 H152 119.8 120.0
O14 C15 C16 H151 239.8 240.1
O14 C15 C16 H152 120.0 120.0
H151 C15 C16 H152 240.2 240.0
N17 C16 C15 H161 120.5 119.9
N17 C16 C15 H162 240.0 240.0
C15 C16 N17 C20 77.7 55.7
C15 C16 N17 C19 198.2 295.7
C15 C16 N17 C18 318.1 175.7
H161 C16 C15 H162 119.5 120.1
O14 C15 H151 C16 119.7 120.0
O14 C15 H151 H152 239.8 240.0
C16 C15 H151 H152 120.1 120.0
H151 C15 C16 N17 290.5 187.4
H151 C15 C16 H161 170.0 67.5
H151 C15 C16 H162 50.5 307.4
O14 C15 H152 C16 240.4 240.0
O14 C15 H152 H151 120.2 120.0
C16 C15 H152 H151 239.8 240.0
H152 C15 C16 N17 50.2 307.5
H152 C15 C16 H161 289.7 187.5
H152 C15 C16 H162 170.2 67.4
N17 C16 C15 H151 290.5 187.4
N17 C16 C15 H152 50.2 307.5
C15 C16 N17 H161 239.5 240.0
C15 C16 N17 H162 120.0 120.0
H161 C16 N17 H162 240.5 240.0
C20 N17 C16 C19 239.5 120.1
C20 N17 C16 C18 119.6 240.1
C16 N17 C20 H201 172.6 299.9
C16 N17 C20 H202 52.6 60.0
C16 N17 C20 H203 292.6 180.0
C19 N17 C16 C18 240.1 120.0
C16 N17 C19 H191 145.0 192.6
C16 N17 C19 H192 24.9 312.6
C16 N17 C19 H193 264.9 72.6
C16 N17 C18 H181 217.2 300.0
C16 N17 C18 H182 97.1 60.0
C16 N17 C18 H183 337.1 180.0
H161 C16 C15 H151 170.0 67.5
H161 C16 C15 H152 289.7 187.5
C15 C16 H161 N17 119.3 119.9
C15 C16 H161 H162 239.6 240.0
N17 C16 H161 H162 120.4 120.0
H161 C16 N17 C20 198.2 175.7
H161 C16 N17 C19 318.7 55.7
H161 C16 N17 C18 78.6 295.7
H162 C16 C15 H151 50.5 307.4
H162 C16 C15 H152 170.2 67.4
C15 C16 H162 N17 241.1 240.1
C15 C16 H162 H161 120.5 120.1
N17 C16 H162 H161 239.4 240.0
H162 C16 N17 C20 317.7 295.8
H162 C16 N17 C19 78.2 175.7
H162 C16 N17 C18 198.1 55.7
C20 N17 C16 H161 198.2 175.7
C20 N17 C16 H162 317.7 295.8
C16 N17 C20 C19 120.3 240.0
C16 N17 C20 C18 240.7 119.9
C19 N17 C20 C18 120.4 240.0
C20 N17 C19 H191 265.5 72.6
C20 N17 C19 H192 145.4 192.6
C20 N17 C19 H193 25.4 312.6
C20 N17 C18 H181 97.2 59.9
C20 N17 C18 H182 337.2 180.0
C20 N17 C18 H183 217.2 299.9
H201 C20 N17 H202 120.0 240.0
H201 C20 N17 H203 240.0 119.9
H202 C20 N17 H203 120.0 239.9
C19 N17 C16 H161 318.7 55.7
C19 N17 C16 H162 78.2 175.7
C16 N17 C19 C20 239.5 120.0
C16 N17 C19 C18 119.3 240.0
C20 N17 C19 C18 239.8 120.0
C19 N17 C20 H201 52.3 60.0
C19 N17 C20 H202 292.4 180.0
C19 N17 C20 H203 172.3 300.1
C19 N17 C18 H181 336.9 180.0
C19 N17 C18 H182 216.9 300.0
C19 N17 C18 H183 96.8 60.0
H191 C19 N17 H192 120.0 240.0
H191 C19 N17 H193 240.0 120.0
H192 C19 N17 H193 120.0 240.0
C18 N17 C16 H161 78.6 295.7
C18 N17 C16 H162 198.1 55.7
C16 N17 C18 C20 119.9 240.1
C16 N17 C18 C19 240.3 120.0
C20 N17 C18 C19 120.4 239.9
C18 N17 C20 H201 292.0 180.0
C18 N17 C20 H202 172.0 300.0
C18 N17 C20 H203 52.0 60.1
C18 N17 C19 H191 25.6 312.6
C18 N17 C19 H192 265.6 72.6
C18 N17 C19 H193 145.6 192.6
H181 C18 N17 H182 120.0 240.0
H181 C18 N17 H183 240.0 120.0
H182 C18 N17 H183 120.0 240.0
H201 C20 N17 C19 52.3 60.0
H201 C20 N17 C18 292.0 180.0
N17 C20 H201 H202 240.0 120.0
N17 C20 H201 H203 120.0 240.1
H202 C20 H201 H203 240.0 120.1
H202 C20 N17 C19 292.4 180.0
H202 C20 N17 C18 172.0 300.0
N17 C20 H202 H201 120.0 240.0
N17 C20 H202 H203 240.0 120.0
H201 C20 H202 H203 120.0 239.9
H203 C20 N17 C19 172.3 300.1
H203 C20 N17 C18 52.0 60.1
N17 C20 H203 H201 240.0 119.9
N17 C20 H203 H202 120.0 240.0
H201 C20 H203 H202 240.0 120.1
H191 C19 N17 C18 25.6 312.6
N17 C19 H191 H192 240.0 120.0
N17 C19 H191 H193 120.0 240.0
H192 C19 H191 H193 240.0 120.0
H192 C19 N17 C18 265.6 72.6
N17 C19 H192 H191 120.0 240.0
N17 C19 H192 H193 240.0 120.0
H191 C19 H192 H193 120.0 240.0
H193 C19 N17 C18 145.6 192.6
N17 C19 H193 H191 240.0 120.0
N17 C19 H193 H192 120.0 240.0
H191 C19 H193 H192 240.0 120.0
N17 C18 H181 H182 240.0 120.0
N17 C18 H181 H183 120.0 240.0
H182 C18 H181 H183 240.0 120.0
N17 C18 H182 H181 120.0 240.0
N17 C18 H182 H183 239.9 120.0
H181 C18 H182 H183 119.9 240.0
N17 C18 H183 H181 240.0 120.0
N17 C18 H183 H182 120.0 240.0
H181 C18 H183 H182 240.0 120.0
C12 C11 C6 H111 239.7 119.9
C12 C11 C6 H112 120.0 240.0
H111 C11 C6 H112 240.3 120.1
C5 C6 C11 H61 120.3 240.0
C5 C6 C11 H62 240.0 120.1
C11 C6 C5 O7 45.7 0.0
C11 C6 C5 O4 225.8 179.9
H61 C6 C11 H62 119.7 240.0
C12 C11 H111 C6 119.5 240.1
C12 C11 H111 H112 239.7 120.0
C6 C11 H111 H112 120.3 239.9
H111 C11 C6 C5 199.9 60.1
H111 C11 C6 H61 79.6 180.0
H111 C11 C6 H62 319.9 300.0
C12 C11 H112 C6 240.8 120.0
C12 C11 H112 H111 120.4 240.0
C6 C11 H112 H111 239.6 120.0
H112 C11 C6 C5 319.6 300.0
H112 C11 C6 H61 199.3 60.0
H112 C11 C6 H62 79.6 180.0
C5 C6 C11 H111 199.9 60.1
C5 C6 C11 H112 319.6 300.0
C11 C6 C5 H61 239.7 120.0
C11 C6 C5 H62 120.0 239.9
H61 C6 C5 H62 240.3 119.9
O7 C5 C6 O4 179.9 180.1
C6 C5 O4 C3 210.9 180.0
H61 C6 C11 H111 79.6 180.0
H61 C6 C11 H112 199.3 60.0
C11 C6 H61 C5 119.6 240.0
C11 C6 H61 H62 239.8 120.0
C5 C6 H61 H62 120.2 240.0
H61 C6 C5 O7 165.9 240.0
H61 C6 C5 O4 346.0 60.0
H62 C6 C11 H111 319.9 300.0
H62 C6 C11 H112 79.6 180.0
C11 C6 H62 C5 240.6 120.1
C11 C6 H62 H61 120.3 240.0
C5 C6 H62 H61 239.7 119.9
H62 C6 C5 O7 285.7 120.1
H62 C6 C5 O4 105.8 300.0
O7 C5 C6 H61 165.9 240.0
O7 C5 C6 H62 285.7 120.1
C6 C5 O7 O4 180.1 179.9
O7 C5 O4 C3 31.0 359.9
O4 C5 C6 H61 346.0 60.0
O4 C5 C6 H62 105.8 300.0
C6 C5 O4 O7 179.9 180.1
C5 O4 C3 C2 152.7 180.0
C5 O4 C3 H31 32.8 300.0
C5 O4 C3 H32 272.7 60.0
C2 C3 O4 H31 119.9 240.0
C2 C3 O4 H32 240.0 120.0
O4 C3 C2 N1 84.1 67.6
O4 C3 C2 H21 324.0 187.6
O4 C3 C2 H22 204.1 307.7
H31 C3 O4 H32 120.1 240.0
O4 C3 C2 H31 240.0 120.0
O4 C3 C2 H32 120.0 240.0
H31 C3 C2 H32 239.9 120.0
N1 C2 C3 H21 120.1 240.0
N1 C2 C3 H22 240.0 119.9
C3 C2 N1 C8 48.4 54.2
C3 C2 N1 C9 168.6 174.1
C3 C2 N1 C10 288.3 294.2
H21 C2 C3 H22 119.9 239.9
O4 C3 H31 C2 120.1 240.0
O4 C3 H31 H32 240.0 120.0
C2 C3 H31 H32 120.0 240.0
H31 C3 C2 N1 204.1 307.6
H31 C3 C2 H21 84.0 67.6
H31 C3 C2 H22 324.1 187.7
O4 C3 H32 C2 239.9 120.0
O4 C3 H32 H31 120.0 240.0
C2 C3 H32 H31 240.1 120.0
H32 C3 C2 N1 324.1 187.6
H32 C3 C2 H21 204.0 307.6
H32 C3 C2 H22 84.1 67.7
N1 C2 C3 H31 204.1 307.6
N1 C2 C3 H32 324.1 187.6
C3 C2 N1 H21 239.9 120.0
C3 C2 N1 H22 120.0 240.0
H21 C2 N1 H22 240.1 120.0
C8 N1 C2 C9 239.8 240.1
C8 N1 C2 C10 120.1 120.0
C2 N1 C8 H81 268.5 59.9
C2 N1 C8 H82 148.5 180.0
C2 N1 C8 H83 28.5 300.0
C9 N1 C2 C10 240.3 240.0
C2 N1 C9 H91 256.0 60.0
C2 N1 C9 H92 136.0 180.0
C2 N1 C9 H93 16.0 300.1
C2 N1 C10 H101 42.8 68.4
C2 N1 C10 H102 282.8 188.3
C2 N1 C10 H103 162.8 308.4
H21 C2 C3 H31 84.0 67.6
H21 C2 C3 H32 204.0 307.6
C3 C2 H21 N1 119.9 240.0
C3 C2 H21 H22 239.9 120.1
N1 C2 H21 H22 120.0 240.0
H21 C2 N1 C8 168.5 294.2
H21 C2 N1 C9 288.7 54.1
H21 C2 N1 C10 48.4 174.2
H22 C2 C3 H31 324.1 187.7
H22 C2 C3 H32 84.1 67.7
C3 C2 H22 N1 240.2 120.0
C3 C2 H22 H21 120.1 239.9
N1 C2 H22 H21 239.9 120.0
H22 C2 N1 C8 288.4 174.2
H22 C2 N1 C9 48.6 294.1
H22 C2 N1 C10 168.3 54.2
C8 N1 C2 H21 168.5 294.2
C8 N1 C2 H22 288.4 174.2
C2 N1 C8 C9 120.2 119.9
C2 N1 C8 C10 240.1 240.0
C9 N1 C8 C10 119.9 120.0
C8 N1 C9 H91 15.7 180.0
C8 N1 C9 H92 255.7 300.0
C8 N1 C9 H93 135.7 60.0
C8 N1 C10 H101 283.2 308.4
C8 N1 C10 H102 163.2 68.3
C8 N1 C10 H103 43.2 188.4
H81 C8 N1 H82 119.9 240.0
H81 C8 N1 H83 240.0 120.0
H82 C8 N1 H83 120.0 240.0
C9 N1 C2 H21 288.7 54.1
C9 N1 C2 H22 48.6 294.1
C2 N1 C9 C8 240.3 240.1
C2 N1 C9 C10 119.9 120.0
C8 N1 C9 C10 239.7 240.0
C9 N1 C8 H81 148.2 300.0
C9 N1 C8 H82 28.3 60.0
C9 N1 C8 H83 268.3 180.0
C9 N1 C10 H101 162.9 188.4
C9 N1 C10 H102 42.9 308.3
C9 N1 C10 H103 282.9 68.4
H91 C9 N1 H92 120.0 240.0
H91 C9 N1 H93 240.0 120.0
H92 C9 N1 H93 120.0 240.0
C10 N1 C2 H21 48.4 174.2
C10 N1 C2 H22 168.3 54.2
C2 N1 C10 C8 119.6 120.0
C2 N1 C10 C9 239.9 240.0
C8 N1 C10 C9 120.3 120.0
C10 N1 C8 H81 28.3 180.0
C10 N1 C8 H82 268.4 300.0
C10 N1 C8 H83 148.4 60.0
C10 N1 C9 H91 136.1 300.0
C10 N1 C9 H92 16.0 60.0
C10 N1 C9 H93 256.0 180.0
H101 C10 N1 H102 120.0 240.0
H101 C10 N1 H103 240.0 120.0
H102 C10 N1 H103 120.0 240.0
H81 C8 N1 C9 148.2 300.0
H81 C8 N1 C10 28.3 180.0
N1 C8 H81 H82 240.1 120.0
N1 C8 H81 H83 120.0 240.0
H82 C8 H81 H83 240.0 120.0
H82 C8 N1 C9 28.3 60.0
H82 C8 N1 C10 268.4 300.0
N1 C8 H82 H81 120.0 240.0
N1 C8 H82 H83 240.0 120.0
H81 C8 H82 H83 120.0 240.0
H83 C8 N1 C9 268.3 180.0
H83 C8 N1 C10 148.4 60.0
N1 C8 H83 H81 240.0 120.0
N1 C8 H83 H82 120.0 240.0
H81 C8 H83 H82 240.0 120.0
H91 C9 N1 C10 136.1 300.0
N1 C9 H91 H92 240.0 120.0
N1 C9 H91 H93 120.0 240.0
H92 C9 H91 H93 240.0 120.0
H92 C9 N1 C10 16.0 60.0
N1 C9 H92 H91 120.0 240.1
N1 C9 H92 H93 240.0 120.0
H91 C9 H92 H93 120.0 240.0
H93 C9 N1 C10 256.0 180.0
N1 C9 H93 H91 240.0 120.0
N1 C9 H93 H92 120.0 240.0
H91 C9 H93 H92 240.0 120.0
N1 C10 H101 H102 240.0 119.9
N1 C10 H101 H103 120.0 240.0
H102 C10 H101 H103 240.0 120.1
N1 C10 H102 H101 120.0 240.0
N1 C10 H102 H103 240.0 120.0
H101 C10 H102 H103 120.0 239.9
N1 C10 H103 H101 240.0 120.0
N1 C10 H103 H102 120.0 240.0
H101 C10 H103 H102 240.0 120.0