PDB Chemical Component SC2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for SC2
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C |
OXT |
1.257 |
1.342 |
| C |
O |
1.257 |
1.208 |
| C |
CA |
1.503 |
1.506 |
| CB |
CA |
1.529 |
1.530 |
| CB |
SG |
1.819 |
1.814 |
| CB |
HBC1 |
1.100 |
1.090 |
| CB |
HBC2 |
1.100 |
1.090 |
| CT |
N |
1.333 |
1.348 |
| CT |
OT |
1.132 |
1.212 |
| CT |
CM |
1.510 |
1.507 |
| CA |
N |
1.454 |
1.465 |
| CA |
HA |
1.099 |
1.090 |
| N |
H2 |
1.000 |
0.970 |
| OXT |
HXT |
0.950 |
0.967 |
| CM |
HMC1 |
1.100 |
1.090 |
| CM |
HMC2 |
1.100 |
1.089 |
| CM |
HMC3 |
1.100 |
1.090 |
| SG |
HSG |
1.300 |
1.345 |
Bond Angles for SC2
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| OXT |
C |
O |
123.5 |
120.0 |
| CA |
C |
OXT |
117.4 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| CA |
C |
O |
119.0 |
120.0 |
| C |
CA |
CB |
109.6 |
109.5 |
| C |
CA |
N |
113.6 |
109.5 |
| C |
CA |
HA |
107.0 |
109.5 |
| CA |
CB |
SG |
111.7 |
109.5 |
| CA |
CB |
HBC1 |
108.7 |
109.5 |
| CA |
CB |
HBC2 |
108.7 |
109.5 |
| CB |
CA |
N |
110.9 |
109.4 |
| CB |
CA |
HA |
109.9 |
109.5 |
| SG |
CB |
HBC1 |
108.8 |
109.5 |
| SG |
CB |
HBC2 |
108.8 |
109.4 |
| CB |
SG |
HSG |
102.0 |
103.0 |
| HBC1 |
CB |
HBC2 |
110.2 |
109.5 |
| N |
CT |
OT |
129.6 |
120.0 |
| N |
CT |
CM |
118.1 |
120.0 |
| CT |
N |
CA |
122.1 |
120.0 |
| CT |
N |
H2 |
118.9 |
120.0 |
| OT |
CT |
CM |
105.2 |
120.0 |
| CT |
CM |
HMC1 |
109.5 |
109.5 |
| CT |
CM |
HMC2 |
109.5 |
109.5 |
| CT |
CM |
HMC3 |
109.4 |
109.4 |
| N |
CA |
HA |
105.6 |
109.5 |
| CA |
N |
H2 |
119.0 |
120.0 |
| HMC1 |
CM |
HMC2 |
109.4 |
109.5 |
| HMC1 |
CM |
HMC3 |
109.5 |
109.4 |
| HMC2 |
CM |
HMC3 |
109.5 |
109.5 |
Torsion Angles for SC2
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
C |
OXT |
O |
180.8 |
179.8 |
| OXT |
C |
CA |
CB |
324.9 |
300.0 |
| OXT |
C |
CA |
N |
200.2 |
180.0 |
| OXT |
C |
CA |
HA |
84.0 |
60.0 |
| CA |
C |
O |
OXT |
179.2 |
180.2 |
| O |
C |
OXT |
HXT |
0.0 |
359.9 |
| O |
C |
CA |
CB |
145.7 |
119.8 |
| O |
C |
CA |
N |
20.9 |
359.8 |
| O |
C |
CA |
HA |
264.8 |
239.8 |
| OXT |
C |
CA |
O |
179.2 |
180.2 |
| CA |
C |
OXT |
HXT |
180.8 |
179.7 |
| C |
CA |
CB |
SG |
284.0 |
180.0 |
| C |
CA |
CB |
HBC1 |
44.0 |
300.0 |
| C |
CA |
CB |
HBC2 |
164.0 |
60.0 |
| CB |
CA |
C |
N |
124.8 |
120.0 |
| CB |
CA |
C |
HA |
240.9 |
240.0 |
| CT |
N |
CA |
C |
246.7 |
275.0 |
| N |
CA |
C |
HA |
116.1 |
120.0 |
| C |
CA |
N |
H2 |
66.8 |
95.0 |
| CB |
CA |
C |
OXT |
324.9 |
300.0 |
| CB |
CA |
C |
O |
145.7 |
119.8 |
| C |
CA |
CB |
N |
233.7 |
240.0 |
| C |
CA |
CB |
HA |
117.3 |
120.0 |
| SG |
CB |
CA |
HBC1 |
240.0 |
240.0 |
| SG |
CB |
CA |
HBC2 |
120.0 |
120.0 |
| CA |
CB |
SG |
HSG |
180.0 |
180.0 |
| HBC1 |
CB |
CA |
HBC2 |
240.0 |
240.0 |
| CT |
N |
CA |
CB |
122.7 |
155.0 |
| N |
CA |
CB |
HA |
243.6 |
240.0 |
| CB |
CA |
N |
H2 |
302.7 |
335.0 |
| CA |
CB |
SG |
HBC1 |
120.0 |
120.0 |
| CA |
CB |
SG |
HBC2 |
240.0 |
240.0 |
| SG |
CB |
CA |
N |
50.3 |
300.0 |
| SG |
CB |
CA |
HA |
166.7 |
60.0 |
| HBC1 |
CB |
SG |
HBC2 |
120.0 |
120.0 |
| CA |
CB |
HBC1 |
SG |
238.2 |
240.0 |
| CA |
CB |
HBC1 |
HBC2 |
119.1 |
120.0 |
| HBC1 |
CB |
CA |
N |
170.3 |
60.0 |
| HBC1 |
CB |
CA |
HA |
286.7 |
180.0 |
| SG |
CB |
HBC1 |
HBC2 |
240.9 |
240.0 |
| HBC1 |
CB |
SG |
HSG |
60.0 |
60.0 |
| CA |
CB |
HBC2 |
SG |
121.8 |
120.0 |
| CA |
CB |
HBC2 |
HBC1 |
241.0 |
240.0 |
| HBC2 |
CB |
CA |
N |
290.3 |
180.0 |
| HBC2 |
CB |
CA |
HA |
46.7 |
300.0 |
| SG |
CB |
HBC2 |
HBC1 |
119.1 |
120.0 |
| HBC2 |
CB |
SG |
HSG |
300.0 |
300.0 |
| C |
CA |
N |
CT |
246.7 |
275.0 |
| CB |
CA |
N |
CT |
122.7 |
155.0 |
| OT |
CT |
N |
CM |
145.6 |
180.0 |
| N |
CT |
CM |
HMC1 |
153.2 |
359.9 |
| N |
CT |
CM |
HMC2 |
273.2 |
120.0 |
| N |
CT |
CM |
HMC3 |
33.2 |
240.1 |
| CT |
N |
CA |
HA |
3.7 |
35.0 |
| CA |
N |
CT |
H2 |
180.0 |
180.0 |
| N |
CT |
OT |
CM |
211.1 |
180.0 |
| OT |
CT |
N |
CA |
84.0 |
0.0 |
| OT |
CT |
N |
H2 |
264.0 |
180.0 |
| OT |
CT |
CM |
HMC1 |
0.0 |
179.9 |
| OT |
CT |
CM |
HMC2 |
120.0 |
300.0 |
| OT |
CT |
CM |
HMC3 |
240.0 |
60.0 |
| N |
CT |
CM |
OT |
153.2 |
180.0 |
| CM |
CT |
N |
CA |
298.4 |
180.0 |
| CM |
CT |
N |
H2 |
118.4 |
360.0 |
| HMC1 |
CM |
CT |
HMC2 |
240.0 |
239.9 |
| HMC1 |
CM |
CT |
HMC3 |
120.0 |
119.9 |
| HMC2 |
CM |
CT |
HMC3 |
240.0 |
240.0 |
| N |
CA |
C |
OXT |
200.2 |
180.0 |
| N |
CA |
C |
O |
20.9 |
359.8 |
| C |
CA |
N |
CB |
124.1 |
120.0 |
| C |
CA |
N |
HA |
243.1 |
240.0 |
| N |
CA |
CB |
SG |
50.3 |
300.0 |
| N |
CA |
CB |
HBC1 |
170.3 |
60.0 |
| N |
CA |
CB |
HBC2 |
290.3 |
180.0 |
| CB |
CA |
N |
HA |
119.0 |
120.0 |
| CA |
N |
CT |
OT |
84.0 |
0.0 |
| CA |
N |
CT |
CM |
298.4 |
180.0 |
| CT |
N |
CA |
H2 |
180.0 |
180.0 |
| HA |
CA |
C |
OXT |
84.0 |
60.0 |
| HA |
CA |
C |
O |
264.8 |
239.8 |
| C |
CA |
HA |
CB |
241.0 |
240.0 |
| C |
CA |
HA |
N |
121.4 |
120.0 |
| HA |
CA |
CB |
SG |
166.7 |
60.0 |
| HA |
CA |
CB |
HBC1 |
286.7 |
180.0 |
| HA |
CA |
CB |
HBC2 |
46.7 |
300.0 |
| CB |
CA |
HA |
N |
240.3 |
240.0 |
| HA |
CA |
N |
H2 |
183.7 |
215.0 |
| H2 |
N |
CT |
OT |
264.0 |
180.0 |
| H2 |
N |
CT |
CM |
118.4 |
360.0 |
| CT |
N |
H2 |
CA |
180.0 |
180.0 |
| H2 |
N |
CA |
HA |
183.7 |
215.0 |
| HXT |
OXT |
C |
O |
0.0 |
359.9 |
| CT |
CM |
HMC1 |
HMC2 |
120.0 |
120.0 |
| CT |
CM |
HMC1 |
HMC3 |
240.0 |
240.1 |
| HMC2 |
CM |
HMC1 |
HMC3 |
120.0 |
120.0 |
| CT |
CM |
HMC2 |
HMC1 |
240.0 |
240.0 |
| CT |
CM |
HMC2 |
HMC3 |
120.0 |
120.0 |
| HMC1 |
CM |
HMC2 |
HMC3 |
240.0 |
240.0 |
| CT |
CM |
HMC3 |
HMC1 |
120.0 |
119.9 |
| CT |
CM |
HMC3 |
HMC2 |
240.0 |
240.0 |
| HMC1 |
CM |
HMC3 |
HMC2 |
120.0 |
120.0 |
| HSG |
SG |
CB |
HBC1 |
60.0 |
60.0 |
| HSG |
SG |
CB |
HBC2 |
300.0 |
300.0 |