PDB Chemical Component SBS

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for SBS

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C01 C02 1.580 1.530
C01 NP7 1.477 1.465
C01 HC11 1.115 1.090
C01 HC12 1.114 1.090
C02 C03 1.531 1.530
C02 C26 1.554 1.528
C02 HC2 1.115 1.090
C03 N04 1.532 1.464
C03 HC31 1.114 1.090
C03 HC32 1.116 1.089
N04 C05 1.457 1.348
N04 HN4 1.020 0.970
C05 O06 1.236 1.215
C05 C07 1.423 1.479
C07 C08 1.427 1.396
C07 C12 1.429 1.395
C08 C09 1.434 1.379
C08 HC8 1.104 1.080
C09 C10 1.453 1.382
C09 HC9 1.103 1.080
C10 C11 1.435 1.383
C10 S13 1.596 1.762
C11 C12 1.423 1.379
C11 H11 1.102 1.080
C12 H12 1.103 1.081
S13 O14 1.454 1.421
S13 O15 1.437 1.420
S13 NP6 1.544 1.656
NP6 HN61 1.020 0.970
NP6 HN62 1.021 0.969
NP7 C18 1.404 1.369
NP7 C20 1.368 1.375
C18 C19 1.507 1.342
C18 H18 1.104 1.080
C19 C25 1.350 1.464
C19 H19 1.102 1.080
C20 C21 1.453 1.391
C20 C25 1.435 1.407
C21 C22 1.426 1.378
C21 H21 1.103 1.080
C22 C23 1.446 1.388
C22 H22 1.102 1.080
C23 C24 1.457 1.365
C23 H23 1.102 1.080
C24 C25 1.451 1.397
C24 H24 1.103 1.080
C26 H261 1.115 1.091
C26 H262 1.115 1.090
C26 H263 1.114 1.090

Bond Angles for SBS

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C02 C01 NP7 108.1 109.5
C02 C01 HC11 112.7 109.5
C02 C01 HC12 112.7 109.5
C01 C02 C03 111.4 109.5
C01 C02 C26 110.4 109.5
C01 C02 HC2 106.9 109.5
NP7 C01 HC11 112.7 109.5
NP7 C01 HC12 112.7 109.4
C01 NP7 C18 124.3 125.0
C01 NP7 C20 127.5 125.1
HC11 C01 HC12 97.8 109.5
C03 C02 C26 107.5 109.5
C03 C02 HC2 109.8 109.5
C02 C03 N04 106.4 109.4
C02 C03 HC31 113.4 109.5
C02 C03 HC32 113.4 109.5
C26 C02 HC2 110.8 109.5
C02 C26 H261 110.4 109.5
C02 C26 H262 111.8 109.5
C02 C26 H263 111.8 109.5
N04 C03 HC31 113.4 109.5
N04 C03 HC32 113.3 109.5
C03 N04 C05 113.9 120.0
C03 N04 HN4 125.2 120.1
HC31 C03 HC32 97.1 109.5
C05 N04 HN4 120.9 120.0
N04 C05 O06 118.2 120.0
N04 C05 C07 118.2 120.0
O06 C05 C07 123.5 120.0
C05 C07 C08 120.8 120.2
C05 C07 C12 121.4 120.1
C08 C07 C12 117.8 119.7
C07 C08 C09 121.3 119.8
C07 C08 HC8 119.1 120.1
C07 C12 C11 121.5 119.9
C07 C12 H12 119.4 120.1
C09 C08 HC8 119.6 120.1
C08 C09 C10 121.0 120.2
C08 C09 HC9 118.8 119.9
C10 C09 HC9 120.2 119.9
C09 C10 C11 116.7 120.3
C09 C10 S13 124.0 119.9
C11 C10 S13 119.3 119.9
C10 C11 C12 121.7 120.2
C10 C11 H11 119.6 119.9
C10 S13 O14 108.9 105.8
C10 S13 O15 108.4 105.8
C10 S13 NP6 113.6 107.4
C12 C11 H11 118.7 119.9
C11 C12 H12 119.1 120.1
O14 S13 O15 109.1 125.3
O14 S13 NP6 110.8 105.8
O15 S13 NP6 105.9 105.7
S13 NP6 HN61 113.6 120.0
S13 NP6 HN62 110.7 120.0
HN61 NP6 HN62 110.7 120.1
C18 NP7 C20 108.2 109.9
NP7 C18 C19 107.4 109.9
NP7 C18 H18 123.5 125.1
NP7 C20 C21 130.6 133.5
NP7 C20 C25 108.9 107.2
C19 C18 H18 129.0 125.0
C18 C19 C25 105.2 107.0
C18 C19 H19 131.4 126.5
C25 C19 H19 123.4 126.5
C19 C25 C20 110.3 106.0
C19 C25 C24 130.2 134.0
C21 C20 C25 120.4 119.3
C20 C21 C22 120.3 119.8
C20 C21 H21 120.7 120.1
C20 C25 C24 119.5 119.9
C22 C21 H21 118.9 120.1
C21 C22 C23 119.9 120.7
C21 C22 H22 119.4 119.7
C23 C22 H22 120.7 119.6
C22 C23 C24 120.0 120.5
C22 C23 H23 119.6 119.7
C24 C23 H23 120.3 119.7
C23 C24 C25 119.8 119.8
C23 C24 H24 120.4 120.1
C25 C24 H24 119.9 120.1
H261 C26 H262 111.9 109.4
H261 C26 H263 111.9 109.4
H262 C26 H263 98.6 109.4

Torsion Angles for SBS

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
NP7 C01 C02 HC11 234.8 240.0
NP7 C01 C02 HC12 125.3 120.0
C02 C01 NP7 C18 86.1 90.0
C02 C01 NP7 C20 266.1 269.7
HC11 C01 C02 HC12 250.5 240.0
C03 C02 C01 C26 119.4 120.0
C03 C02 C01 HC2 240.0 240.0
C01 C02 C03 N04 167.1 180.0
C01 C02 C03 HC31 292.4 300.0
C01 C02 C03 HC32 41.9 60.0
C26 C02 C01 HC2 120.6 120.0
C01 C02 C26 H261 180.0 60.0
C01 C02 C26 H262 305.2 180.0
C01 C02 C26 H263 54.7 300.0
C02 C01 NP7 HC11 125.2 120.0
C02 C01 NP7 HC12 234.7 240.0
NP7 C01 C02 C03 181.9 180.0
NP7 C01 C02 C26 62.5 60.0
NP7 C01 C02 HC2 301.9 300.0
HC11 C01 NP7 HC12 109.5 120.0
C18 NP7 C01 C20 180.0 180.3
C01 NP7 C18 C19 180.2 179.9
C01 NP7 C18 H18 0.2 360.0
C01 NP7 C20 C21 359.9 0.7
C01 NP7 C20 C25 179.7 179.9
C02 C01 HC11 NP7 237.3 240.0
C02 C01 HC11 HC12 118.6 120.0
HC11 C01 C02 C03 307.1 300.0
HC11 C01 C02 C26 187.7 180.0
HC11 C01 C02 HC2 67.1 60.0
NP7 C01 HC11 HC12 241.4 240.0
HC11 C01 NP7 C18 320.8 330.0
HC11 C01 NP7 C20 140.9 149.7
C02 C01 HC12 NP7 122.8 120.0
C02 C01 HC12 HC11 241.4 240.0
HC12 C01 C02 C03 56.6 60.0
HC12 C01 C02 C26 297.2 300.0
HC12 C01 C02 HC2 176.6 180.0
NP7 C01 HC12 HC11 118.6 120.0
HC12 C01 NP7 C18 211.4 210.0
HC12 C01 NP7 C20 31.4 29.7
C03 C02 C01 NP7 181.9 180.0
C03 C02 C01 HC11 307.1 300.0
C03 C02 C01 HC12 56.6 60.0
C01 C02 C03 C26 238.9 240.0
C01 C02 C03 HC2 118.2 120.0
C26 C02 C03 HC2 239.3 240.0
C03 C02 C26 H261 58.3 300.0
C03 C02 C26 H262 183.5 60.0
C03 C02 C26 H263 293.0 180.0
N04 C03 C02 HC31 234.7 240.0
N04 C03 C02 HC32 125.2 120.0
C02 C03 N04 C05 130.0 180.1
C02 C03 N04 HN4 309.9 360.0
HC31 C03 C02 HC32 250.5 240.0
C26 C02 C01 NP7 62.5 60.0
C26 C02 C01 HC11 187.7 180.0
C26 C02 C01 HC12 297.2 300.0
C01 C02 C26 C03 121.7 120.0
C01 C02 C26 HC2 241.8 240.0
C03 C02 C26 HC2 120.0 120.0
C26 C02 C03 N04 288.2 300.0
C26 C02 C03 HC31 53.5 60.0
C26 C02 C03 HC32 163.0 180.0
H261 C26 C02 H262 234.8 240.0
H261 C26 C02 H263 125.3 120.0
H262 C26 C02 H263 250.5 240.0
HC2 C02 C01 NP7 301.9 300.0
HC2 C02 C01 HC11 67.1 60.0
HC2 C02 C01 HC12 176.6 180.0
C01 C02 HC2 C03 239.0 240.0
C01 C02 HC2 C26 120.4 120.0
C03 C02 HC2 C26 241.4 240.0
HC2 C02 C03 N04 48.9 60.0
HC2 C02 C03 HC31 174.2 180.0
HC2 C02 C03 HC32 283.7 300.0
HC2 C02 C26 H261 298.3 180.0
HC2 C02 C26 H262 63.5 300.0
HC2 C02 C26 H263 173.0 60.0
N04 C03 C02 C26 288.2 300.0
N04 C03 C02 HC2 48.9 60.0
C02 C03 N04 HC31 125.3 119.9
C02 C03 N04 HC32 234.7 240.0
HC31 C03 N04 HC32 109.5 120.0
C05 N04 C03 HN4 180.1 180.1
C03 N04 C05 O06 0.5 359.9
C03 N04 C05 C07 180.6 180.0
HC31 C03 C02 C26 53.5 60.0
HC31 C03 C02 HC2 174.2 180.0
C02 C03 HC31 N04 238.5 240.1
C02 C03 HC31 HC32 119.3 120.0
N04 C03 HC31 HC32 240.7 240.0
HC31 C03 N04 C05 4.7 60.1
HC31 C03 N04 HN4 184.6 240.0
HC32 C03 C02 C26 163.0 180.0
HC32 C03 C02 HC2 283.7 300.0
C02 C03 HC32 N04 121.4 120.0
C02 C03 HC32 HC31 240.7 240.0
N04 C03 HC32 HC31 119.3 120.0
HC32 C03 N04 C05 255.2 300.1
HC32 C03 N04 HN4 75.2 120.0
C05 N04 C03 HC31 4.7 60.1
C05 N04 C03 HC32 255.2 300.1
C03 N04 C05 HN4 179.9 179.9
O06 C05 N04 C07 179.9 179.9
N04 C05 C07 C08 360.0 179.9
N04 C05 C07 C12 179.6 359.6
HN4 N04 C03 HC31 184.6 240.0
HN4 N04 C03 HC32 75.2 120.0
C03 N04 HN4 C05 180.1 180.1
HN4 N04 C05 O06 180.6 180.0
HN4 N04 C05 C07 0.7 0.1
O06 C05 N04 HN4 180.6 180.0
N04 C05 O06 C07 180.1 180.1
O06 C05 C07 C08 180.1 0.1
O06 C05 C07 C12 359.8 179.8
C07 C05 N04 HN4 0.7 0.1
N04 C05 C07 O06 179.9 179.9
C08 C07 C05 C12 180.4 180.3
C05 C07 C08 C09 179.5 180.0
C05 C07 C08 HC8 359.5 359.9
C05 C07 C12 C11 180.7 179.8
C05 C07 C12 H12 0.7 0.3
C05 C07 C08 C12 179.7 179.7
C08 C07 C12 C11 0.4 359.5
C08 C07 C12 H12 180.4 180.0
C09 C08 C07 HC8 180.0 180.1
C07 C08 C09 C10 359.9 360.0
C07 C08 C09 HC9 179.9 180.0
C05 C07 C12 C08 180.3 180.3
C12 C07 C08 C09 359.8 0.3
C12 C07 C08 HC8 179.8 180.2
C10 C11 C12 C07 359.8 0.5
C07 C12 C11 H11 179.8 180.3
C11 C12 C07 H12 180.0 179.5
C09 C08 C07 C12 359.8 0.3
C07 C08 C09 HC8 180.0 179.9
C10 C09 C08 HC9 180.0 179.9
C08 C09 C10 C11 0.2 0.1
C08 C09 C10 S13 181.2 180.0
HC8 C08 C07 C12 179.8 180.2
C07 C08 HC8 C09 180.0 180.1
HC8 C08 C09 C10 179.9 180.0
HC8 C08 C09 HC9 359.9 0.1
C10 C09 C08 HC8 179.9 180.0
C08 C09 C10 HC9 180.0 180.1
C11 C10 C09 S13 179.0 180.1
C09 C10 C11 C12 359.9 359.7
C09 C10 C11 H11 179.9 180.0
C09 C10 S13 O14 75.3 202.6
C09 C10 S13 O15 193.9 337.4
C09 C10 S13 NP6 311.3 90.0
HC9 C09 C08 HC8 359.9 0.1
C08 C09 HC9 C10 180.0 179.9
HC9 C09 C10 C11 180.3 180.0
HC9 C09 C10 S13 1.2 359.9
C07 C12 C11 C10 359.8 0.5
C11 C10 C09 HC9 180.3 180.0
C09 C10 C11 S13 180.9 179.9
C11 C10 S13 O14 256.3 22.6
C11 C10 S13 O15 14.9 157.3
C11 C10 S13 NP6 132.3 269.9
C12 C11 C10 H11 180.0 179.7
C10 C11 C12 H12 179.7 180.0
S13 C10 C09 HC9 1.2 359.9
C09 C10 S13 C11 179.0 180.1
S13 C10 C11 C12 179.0 179.8
S13 C10 C11 H11 359.0 0.1
O14 S13 C10 O15 241.4 225.2
O14 S13 C10 NP6 124.0 112.6
O15 S13 C10 NP6 242.6 247.4
C10 S13 NP6 HN61 180.0 180.0
C10 S13 NP6 HN62 54.7 0.0
C07 C12 C11 H12 180.0 180.5
C12 C11 C10 S13 179.0 179.8
C10 C11 C12 H11 180.0 180.3
H11 C11 C10 S13 359.0 0.1
C10 C11 H11 C12 180.0 179.7
H11 C11 C12 H12 359.7 359.8
C07 C12 H12 C11 180.0 179.5
H12 C12 C11 H11 359.7 359.8
C10 S13 O14 O15 118.1 123.2
C10 S13 O14 NP6 234.4 246.3
O15 S13 O14 NP6 116.2 123.1
O14 S13 NP6 HN61 57.0 67.4
O14 S13 NP6 HN62 291.7 247.4
C10 S13 O15 O14 241.5 236.8
C10 S13 O15 NP6 122.2 113.7
O14 S13 O15 NP6 240.7 236.9
O15 S13 NP6 HN61 298.8 292.6
O15 S13 NP6 HN62 173.5 112.7
C10 S13 NP6 O14 123.0 112.6
C10 S13 NP6 O15 241.2 247.4
O14 S13 NP6 O15 118.2 134.7
HN61 NP6 S13 HN62 125.3 180.0
S13 NP6 HN61 HN62 234.7 180.0
S13 NP6 HN62 HN61 126.9 180.0
C18 NP7 C01 HC11 320.8 330.0
C18 NP7 C01 HC12 211.4 210.0
C01 NP7 C18 C20 180.0 179.8
C18 NP7 C20 C21 179.9 180.4
C18 NP7 C20 C25 359.7 359.7
C19 C18 NP7 H18 180.0 180.0
NP7 C18 C19 C25 0.1 0.0
NP7 C18 C19 H19 180.1 180.0
C20 NP7 C01 HC11 140.9 149.7
C20 NP7 C01 HC12 31.4 29.7
C01 NP7 C20 C18 180.0 180.2
C20 NP7 C18 C19 0.1 0.2
C20 NP7 C18 H18 180.1 180.2
C19 C25 C20 NP7 0.4 0.3
C21 C20 NP7 C25 180.2 180.7
NP7 C20 C21 C22 179.4 179.7
NP7 C20 C21 H21 359.4 359.4
NP7 C20 C25 C24 180.5 180.2
C19 C18 NP7 C20 0.1 0.2
NP7 C18 C19 H18 180.0 180.0
C25 C19 C18 H19 180.0 180.1
C18 C19 C25 C20 359.7 359.8
C18 C19 C25 C24 179.5 180.0
H18 C18 NP7 C20 180.1 180.2
NP7 C18 H18 C19 180.0 180.0
H18 C18 C19 C25 180.1 180.0
H18 C18 C19 H19 0.1 359.9
NP7 C20 C25 C19 0.4 0.3
C25 C19 C18 H18 180.1 180.0
C18 C19 C25 H19 180.0 179.9
C21 C20 C25 C19 180.2 179.7
C20 C25 C19 C24 180.2 179.8
C23 C24 C25 C19 180.1 180.0
C19 C25 C24 H24 0.2 359.9
H19 C19 C18 H18 0.1 359.9
C18 C19 H19 C25 180.0 180.1
H19 C19 C25 C20 179.7 179.8
H19 C19 C25 C24 359.5 0.1
NP7 C20 C21 C25 179.8 179.2
C19 C25 C20 C21 180.2 179.7
C21 C20 C25 C24 0.3 359.5
C22 C21 C20 H21 180.0 180.2
C20 C21 C22 C23 0.0 359.7
C20 C21 C22 H22 180.0 179.8
NP7 C20 C25 C21 180.2 180.6
C20 C25 C19 H19 179.7 179.8
C19 C25 C20 C24 179.8 180.2
C25 C20 C21 C22 359.7 0.5
C25 C20 C21 H21 179.7 180.2
C23 C24 C25 C20 359.9 0.2
C20 C25 C24 H24 179.9 180.2
C22 C21 C20 C25 359.7 0.5
C20 C21 C22 H21 180.0 179.8
C23 C22 C21 H22 180.0 179.9
C21 C22 C23 C24 0.2 0.0
C21 C22 C23 H23 180.2 180.0
H21 C21 C20 C25 179.7 180.2
C20 C21 H21 C22 180.0 180.2
H21 C21 C22 C23 180.0 180.0
H21 C21 C22 H22 0.0 0.0
C23 C22 C21 H21 180.0 180.0
C21 C22 C23 H22 180.0 180.1
C24 C23 C22 H23 180.0 180.0
C22 C23 C24 C25 359.8 360.0
C22 C23 C24 H24 179.8 180.0
H22 C22 C21 H21 0.0 0.0
C21 C22 H22 C23 180.0 179.9
H22 C22 C23 C24 180.2 180.0
H22 C22 C23 H23 0.3 359.9
C19 C25 C24 C23 180.1 180.0
C20 C25 C24 C23 359.9 0.2
C24 C23 C22 H22 180.2 180.0
C22 C23 C24 H23 180.0 180.0
C25 C24 C23 H24 180.0 179.9
H23 C23 C22 H22 0.3 359.9
C22 C23 H23 C24 180.0 180.0
H23 C23 C24 C25 179.8 180.0
H23 C23 C24 H24 359.8 0.1
C24 C25 C19 H19 359.5 0.1
C19 C25 C24 C20 180.2 179.8
C25 C24 C23 H23 179.8 180.0
C23 C24 C25 H24 180.0 180.1
H24 C24 C23 H23 359.8 0.1
C23 C24 H24 C25 180.0 179.9
H261 C26 C02 HC2 298.3 180.0
C02 C26 H261 H262 125.2 120.0
C02 C26 H261 H263 234.8 240.0
H262 C26 H261 H263 109.6 119.9
H262 C26 C02 HC2 63.5 300.0
C02 C26 H262 H261 235.6 240.0
C02 C26 H262 H263 117.7 120.1
H261 C26 H262 H263 242.1 240.1
H263 C26 C02 HC2 173.0 60.0
C02 C26 H263 H261 124.4 120.0
C02 C26 H263 H262 242.3 239.9
H261 C26 H263 H262 117.8 119.9